Archaeoglobus sulfaticallidus: Asulf_00393
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Entry
Asulf_00393 CDS
T02642
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ast
Archaeoglobus sulfaticallidus
Pathway
ast03410
Base excision repair
ast03430
Mismatch repair
ast03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Asulf_00393
03430 Mismatch repair
Asulf_00393
03440 Homologous recombination
Asulf_00393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ast03400
]
Asulf_00393
DNA repair and recombination proteins [BR:
ast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Asulf_00393
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Asulf_00393
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Asulf_00393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DUF1433
DUF1953
Motif
Other DBs
NCBI-ProteinID:
AGK60420
UniProt:
N0BJV7
LinkDB
All DBs
Position
complement(355305..356528)
Genome browser
AA seq
407 aa
AA seq
DB search
MEEYLNKEFFEWVDCVAGILKDAEKQATIVYHNDADGICSSAILSRVCEYFGLKTELICI
EKVNPDIIEIIHADRDGIIIYTDLAGLAAEAIDRINAGRGKVIIIDHHPAKEIESDSVFV
LNPELSGISGDIFVSASTLNYIFFRAIAGDEAEKCAYLAVVGSVGDYHDRYGGVLGFDRF
ALNEAMRMKQVKIMIDGMKERYYIDFFGEYADVVAERLTTLGAVGYEEKGYQLGLKACFE
GFNGATMEIVKRLERIREEKFEKMVEFLKTNLKQEKHVQWFHIGDSFSPMGVKVVGEFCE
LIKDMTFVDDSKYLIGFQSMPKVVPDLGEIDWNVVKMSGRVPTPLERKIFKGEAPGLDYL
VPKASEIVGAFADATHKIAAATIVDGGKEEEFIEAFERLVENEVSGG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatatctcaataaggaattttttgaatgggtggattgtgtagcgggcattttg
aaggatgctgaaaagcaggcaactatagtttatcacaacgatgcggatggtatatgctca
tcagccatactttcaagggtttgcgaatattttgggttgaagactgaactaatctgcata
gagaaagtcaaccctgatatcattgagataattcacgctgacagagatggaataataata
tacacagatcttgcaggcttggccgcagaagccatcgacagaataaatgctggcaggggg
aaggtaattataattgaccatcatccagcaaaagagatagagagcgatagcgttttcgtt
ctaaatccagagctttcaggcatatctggtgacatcttcgtttcagcttcaacgctcaac
tacatattcttccgtgctattgcaggtgatgaggcggagaaatgtgcctatctcgcagtg
gtcgggagcgttggggactaccatgacaggtacggtggcgttctggggttcgatagattc
gcgttaaatgaggcgatgcgcatgaaacaggttaagattatgattgatgggatgaaggag
aggtactatatcgacttttttggagagtatgctgatgtggtggcagaacgtctaacgact
cttggcgctgttggttatgaggagaaaggctatcagttgggacttaaggcctgctttgaa
ggtttcaacggtgctacgatggagattgtaaaaagactggaaaggataagggaagagaaa
tttgaaaagatggttgaattcctgaaaaccaatttgaagcaggagaaacatgttcagtgg
tttcatattggggactcattctctccgatgggggttaaggttgttggagagttctgtgag
ctgataaaagacatgacatttgttgatgacagcaagtacctcataggcttccagagcatg
ccgaaggtggttcccgatctgggtgagatagactggaatgtcgtcaagatgagcggaagg
gttccgacaccccttgaaagaaaaattttcaaaggggaagctccgggactggactatctc
gtgccgaaagccagtgaaattgttggagcctttgccgatgcaactcataagattgctgcg
gcaactattgttgatgggggcaaggaggaggaattcattgaagcttttgagaggctggtg
gagaatgaagtgtctggcggttaa
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