Archaeoglobus sulfaticallidus: Asulf_02187
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Entry
Asulf_02187 CDS
T02642
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ast
Archaeoglobus sulfaticallidus
Pathway
ast04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ast00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Asulf_02187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ast03019
]
Asulf_02187
03009 Ribosome biogenesis [BR:
ast03009
]
Asulf_02187
04131 Membrane trafficking [BR:
ast04131
]
Asulf_02187
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ast04147
]
Asulf_02187
Messenger RNA biogenesis [BR:
ast03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Asulf_02187
Ribosome biogenesis [BR:
ast03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Asulf_02187
Membrane trafficking [BR:
ast04131
]
SNARE
SNARE associated proteins
Others
Asulf_02187
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Asulf_02187
Exosome [BR:
ast04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Asulf_02187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_5
AAA_16
RuvB_N
AAA_2
TIP49
CDC48_2
AAA_14
AAA_22
AAA_33
Vps4_C
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
IstB_IS21
ABC_tran
Sigma54_activat
AAA_17
AAA_30
AAA_18
SLFN-g3_helicase
AAA_3
Zeta_toxin
Parvo_NS1
AAA_24
AAA_11
TsaE
DUF815
ResIII
AAA_19
bpMoxR
NACHT
NB-ARC
DUF5906
PhoH
AAA_lid_PRS2_C
Zot
CtsR_C
Motif
Other DBs
NCBI-ProteinID:
AGK62140
UniProt:
N0BP64
LinkDB
All DBs
Position
complement(1981588..1984017)
Genome browser
AA seq
809 aa
AA seq
DB search
MKLTLKVNQAYPSDSGRGIARLDPDTMLKLKISPGDIIEIKGRRATVAKVWRAPKRDWGK
GIIRVDRFIRENSGVGIGDSVEVRKVDYAPAKLVILAPLRKIEFRVYGMDIGDYLKHQLL
KRPLVEGDLIPLVGAPALTGFGKYAQNQGALVFVAVKTDPKDVVIIDETTKVVYRERPAK
GFERIGRAGVTYEDIGGLKEELQKVREVIELPLKYPEIFQRLGIDPPKGVLLHGPPGTGK
TLIARAVANEIGASFYTINGPEIMSKFYGESEQRLREIFEEAKENSPSIIFIDEIDAIAP
RRDEVTGEVERRVVAQLLTLMDGLEERGQVIVIAATNRVDAVDPALRRPGRFDREIEIGV
PDREGRFEILQIHTRNMPLEPDYSRDLVYEALKSLKKSYAMDGDEDLIREIDFAIEGVSK
LETKEQIKDLIYSLFDETIIAELEREIIKNMLKQLADQTHGFVGADIEALSKEAAMKALR
KYLPQIDLNKDEIPAEVLESIKITIDDFKEALKEIEPSALREVLVEIPKVTWEDVGGLEE
IKREIVEAVEWPLKYPEKFKKFSIKPPKGVLLYGPPGTGKTLIAKAVAHETEANFITVKG
SELLSKWLGESEKAVRKIFRKARQVAPCIIFFDEIDAIAQMRGLDEGSRAVERVVNQILT
EMDGLEELEEVIVLGATNRPDILDPALLRPGRFDRLVYVRPPDRRSRLAIFRIHTRGMPL
GDDVDLEELADLTEGYVGADIEAVCREAVMLALREDLNAEVVEMRHFLEALKKVKPSVTD
SMLSFYERFEEKARQERQKVTARSFLGYG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacactgaaagtcaatcaggcgtatccaagcgattcaggaaggggtatagcc
cgtcttgatccggatacgatgctgaagctgaaaatctcacctggagatataatcgagata
aagggtagaagggctacagttgcaaaagtatggagagcccctaaaagggactggggcaag
ggtataattagagttgataggtttataagggaaaactctggagttggtataggagatagt
gttgaagttcggaaagtagattatgctccagctaagctcgtcattcttgctcctttgagg
aaaatcgagttcagagtttatggaatggatatcggtgattatctaaagcatcaacttctc
aagagaccgctcgttgagggagatcttatcccactggttggggctccagccctgacgggc
tttggcaagtatgcccaaaatcagggagctttggtttttgtagcggttaagacagatcca
aaggatgttgttataattgatgagacaaccaaggttgtttacagagagaggccggctaaa
ggttttgagaggattggaagggcaggagtaacatacgaggatattggtggtctgaaagag
gaactgcagaaggtcagggaggttatagaactccctttgaagtatccggagatcttccag
aggcttggaatagacccacctaagggagttctgctccatggccctccgggaacaggaaag
acactgatagctagggcagttgctaacgagataggagcctctttctatacaataaacggg
ccggagataatgagcaagttctatggtgagagtgagcagaggctcagagagatcttcgaa
gaggcgaaagaaaactctccatcaataatattcatcgatgagatagatgccatagccccc
agaagagatgaagtcacaggggaggtagagagaagagttgttgctcagcttctgaccctg
atggatggacttgaggagagggggcaggttatagttatcgcagcaacgaacagggttgat
gctgttgatcctgccttgagaaggcctggaaggttcgacagagagattgagattggtgta
ccggatagggaaggaaggttcgagatacttcagattcatacaagaaatatgcctttagag
cctgattacagcagagatcttgtttatgaggccttgaagtctctgaagaagagctatgcg
atggatggggatgaagatctgatcagagaaatcgactttgcgatcgaaggagtcagtaag
ctcgaaacaaaggaacagattaaagatttgatctattctctcttcgatgagacgataatc
gctgaattggagagggaaataatcaagaatatgctcaagcagcttgcagatcagacacat
ggcttcgttggagctgacatcgaagctctatcaaaagaggctgcgatgaaggctttgaga
aaatatctacctcagatcgacctgaacaaagatgaaatccctgcggaggtcttggaatct
ataaagattacgatagatgacttcaaagaagctctgaaagaaattgagccatcagcactg
agagaggtgctcgttgagataccgaaggttacatgggaggatgttggaggactggaagag
atcaagagggagatcgtagaggctgttgagtggccgcttaagtatcctgagaagttcaag
aagttctcgataaaaccgcccaaaggtgttctgctatacggcccgcctggcacaggaaag
acgctgatagctaaagcggtagctcatgagacggaggcgaactttataactgtaaaggga
agtgagttgctcagcaagtggctgggtgagagtgagaaggctgtgagaaagatattcaga
aaagcgcgacaggttgcaccgtgtataatattcttcgatgagatcgatgccattgcacag
atgagaggattggatgagggtagcagggcagttgagagggttgtaaatcagatactgact
gagatggatggattggaagagcttgaggaagtcatcgtccttggagctacaaacaggcca
gacatccttgatccagctttactgaggccgggaagattcgatagactggtttatgtgaga
cctccagacagaaggagcaggcttgcgatattcaggattcacacaaggggtatgcctctt
ggagacgatgttgatcttgaggaacttgcggatctaactgaggggtatgttggcgctgac
atcgaggcggtatgtagggaggcagtcatgcttgctttgagagaggatcttaatgctgaa
gtggtcgagatgagacacttcttggaggctttgaagaaggtaaagccgagcgttacagat
tcgatgctcagcttctacgagaggttcgaggagaaagcgagacaggagagacagaaggtt
acggccagatcatttctgggctatggataa
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