Asticcacaulis sp. DW145: ATDW_00450
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Entry
ATDW_00450 CDS
T10232
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
astd Asticcacaulis sp. DW145
Pathway
astd02020
Two-component system
astd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ATDW_00450 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATDW_00450 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
astd03021
]
ATDW_00450 (rpoN)
Transcription machinery [BR:
astd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATDW_00450 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
HTH_3
Phage_CII
MLTR_LBD
DUF4741
Motif
Other DBs
NCBI-ProteinID:
BEV09549
LinkDB
All DBs
Position
1:complement(44971..46479)
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AA seq
502 aa
AA seq
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MSLGQRLEIRQGQGLVITPQLQQAIKLLQLSNLELEAVVEAELERNPLLLREDGEGGPDT
PDNDNDMPREERGELELSDRDTQQANSDLDASEGDVYGDDEPTVREPVASADMGEGPMVD
WSRAGKGGGFDGDGDTLDRAMSRDKTLAEHLMDQALIAGFSAPEMAVAQILIDAVDEGGY
LRADLTEIAERLGCSMALIEKVLGVCQGFEPTGVMARSVPECLKLQLIERNRFDPAMAAL
IDNLELLARRDLSALRRVCGVDDEDLAEMIRELKALTPRPGAAFGAEPQAGVVPDVFVRQ
DLSGGWRVDLNSDTLPRVLVDQSYHAKVVNSARSDQEKTYLTECLSQANWLIKSLDQRAR
TILKVSAEIVRQQDGFFVYGVEHLRPLNLKTVAEAVGMHESTISRVTTNKYISTPRGVFE
LKFFFTSAIAAADGSEAHSAESVRHKIKHLIEGEKASGEVLSDDRIVEILKEAGVDIARR
TVAKYREALRIPSSVERKRMIR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaggtcaaaggctggaaattagacaagggcaggggctcgtcatcacgccccag
ttgcagcaagcgatcaagcttctgcaattgtcgaatctcgagctggaggccgtggtcgag
gccgagctggagcgcaacccccttctgctccgcgaagacggcgaaggcggccccgacaca
ccggataatgacaacgacatgccccgcgaggaacgcggcgaactggagctgtcggaccgc
gatacccagcaggccaattccgatctcgacgcctctgaaggcgacgtctatggcgacgat
gagccgacggtgcgtgaacccgtggcgtctgccgacatgggcgagggtccgatggtcgat
tggagccgcgccggcaagggcggtggtttcgatggcgacggcgatacgctcgaccgcgct
atgagccgcgataagacgctggctgaacatctgatggatcaggccctgatcgccggtttc
agcgcccctgaaatggcagtagcgcaaatcttaattgacgccgtggatgaaggcggctac
ctgcgcgccgatctgacggaaatcgccgaacgcctcggctgttccatggccctgatcgaa
aaggtcctgggtgtctgtcagggctttgagccgaccggcgtgatggcccgttctgttccc
gaatgcctgaaactgcaactgatcgagcgtaatcgcttcgatccggccatggcggcgctg
atcgacaacctggagcttctggcgcgccgcgatctgagcgcgctgcgccgtgtctgtggt
gtcgatgacgaagatctggcggagatgatccgtgaactgaaggccctgaccccccgtccg
ggggcagccttcggtgccgaaccgcaggccggcgtggtgcccgatgtctttgtgcgtcag
gacctgtcgggtggctggcgtgtcgatctcaacagcgacaccctgccgcgcgtgctggtc
gatcagagctatcacgccaaggtggtgaactcagcccgttcggatcaggaaaagacctac
ctcaccgaatgtctgtcgcaggccaactggctgatcaagagcctggatcaacgcgcgcgc
accatcctcaaggtgtcggcggaaatcgtgcgtcagcaggatgggttcttcgtctatggt
gttgagcacctgcgcccgctgaaccttaaaaccgtggctgaggccgtgggaatgcacgaa
tcgaccatttcgcgggtcactaccaataaatatatctcgaccccgcgcggcgtgtttgaa
ctcaaattcttcttcacctcggccattgcggccgccgacggctcagaggcccactccgcc
gagtcggtgcgccacaagatcaagcacctgatcgagggcgaaaaggcatcgggcgaggtg
ttgtcggacgaccgtatcgtcgaaatcctcaaggaagccggtgtcgatattgcccgccgc
accgtggctaagtaccgagaagccttgcgcatcccgtcttcggtcgagcgcaagcgcatg
atccgctag
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