Asticcacaulis sp. DW145: ATDW_02670
Help
Entry
ATDW_02670 CDS
T10232
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd00040
Pentose and glucuronate interconversions
astd01100
Metabolic pathways
astd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ATDW_02670
Enzymes [BR:
astd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
ATDW_02670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BEV09771
LinkDB
All DBs
Position
1:292465..293787
Genome browser
AA seq
440 aa
AA seq
DB search
MHKRDFLLGAAAAAFAAPALAQPPAAKTDIPREWIDADTGHRIVRLSDADNSKSLYFHDN
AFTADGKWMIFDSPSGIQMVELATRKLRQLTPKGYGSLMVSRTKNICYARKFPGGEKKSA
DDKGRDGIEIVAIDMDTGKIRTIAKDIKGYVTTVNADDTLLAGTWAEREYQLQPGPKVAN
TDGGYNAIGPDGKPLSFQAAKEVRMAERLAQNIPMEIFTLDIQTGERKVVTASTDWLNHV
QFSPTDPQRLMYCHEGPWHSVDRIWTIRTDGTGKENVHKRMMNMEIAGHEFFAFDGERIL
YDLQTPRGEDFWLASYDLKTHKRIWYHMERNEWSVHFQISRDGKLFAGDGGDADMVARAL
DGKWLYLFQPEIIDDLGVSAPNAAELVRPGVLRATKLVNLKAHNYNTEPNLQFTPDGKWI
VFRSNMHGPIHVYAVQVAKA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgcataagcgagactttcttctaggtgccgcagcggcggcctttgcggcccctgcgctg
gcgcaaccccctgcggcgaaaaccgacatcccgcgcgaatggatagacgccgacaccggc
caccgcattgtgcgcttgtcggacgcggataattccaaatccctgtacttccatgacaat
gccttcacggcggatggcaagtggatgattttcgacagcccctccggcatccagatggtc
gaactggcgacgcgcaaactgcgtcaattgacgccgaaaggctatggcagcctgatggtc
tcgcgcacgaagaatatctgctacgcgcgcaaattccccggcggtgaaaagaagagcgcc
gatgacaagggccgtgacggtatcgagatcgtcgccatcgacatggatacgggcaagatc
cgcactatcgccaaggacatcaagggctatgtgacgacggtcaatgccgacgataccctg
ctggccggcacctgggcagagcgcgaatatcagcttcaaccggggccgaaggtcgccaat
acggatggcggctataatgccattggcccggacggcaagccgctcagctttcaggcggcc
aaggaggtgcgcatggccgagcggctggcgcagaacatcccgatggagattttcacgctg
gacatccagaccggcgaacgcaaggtggtcaccgcctcgaccgactggctcaaccacgta
cagttttcgcccactgatccgcagcgtctgatgtattgccatgaaggaccgtggcatagc
gtcgatcgcatctggacgatcaggaccgacggcacgggcaaggaaaacgtccataagcgc
atgatgaatatggaaatcgccggacacgaattctttgcgttcgatggtgagcgaatcctg
tatgacctgcaaacaccgcgcggtgaggacttctggctggccagctatgacctcaaaacg
cacaagcgcatctggtatcatatggagcgtaacgaatggtctgtgcacttccagatcagc
cgcgacggtaagctgtttgctggtgacggcggcgatgccgacatggtcgcacgtgcgctg
gacggcaaatggctctatctgttccagccggagattatcgacgacctcggcgtctcggcc
cccaatgcggcagagctggtgcggccgggggtgctgcgcgccacgaaactggtgaatctc
aaggcgcataactataacaccgaaccgaacctgcaattcacgccggacggcaaatggatc
gtcttccgctccaatatgcacggtcctatccacgtctatgcggtgcaggtggccaaggct
taa
DBGET
integrated database retrieval system
