Asticcacaulis sp. DW145: ATDW_03570
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Entry
ATDW_03570 CDS
T10232
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd00300
Lysine biosynthesis
astd00470
D-Amino acid metabolism
astd01100
Metabolic pathways
astd01110
Biosynthesis of secondary metabolites
astd01120
Microbial metabolism in diverse environments
astd01230
Biosynthesis of amino acids
Module
astd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATDW_03570 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ATDW_03570 (lysA)
Enzymes [BR:
astd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ATDW_03570 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BEV09861
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All DBs
Position
1:complement(396874..398190)
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AA seq
438 aa
AA seq
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MNHFDIRDGEMHAEGVSVRELAERVGTPLYVYSSATFERHFQVFSQALWAQDALQSPKNE
APLIAYATKANSNLAVLQTLAEQGAGADTVSEGEIRKALTAGIPPERIVFSGVGKTDAEM
AFALKTGIYQLNVESKPELERLSHVAASLGVVAPIVIRINPGVGAGGHAKITTGGAKDKF
GVSAREAISLYGQAAADPNIAPMGIACHIGSQITDLAPMQAAFSKMKGWVQELRASGLSV
ERLDLGGGLGVPYFNMPEPPSPNDFAQMVALTVGNLGVRYAFEPGRLIAANAGILVSRVI
HIHEREDSGQKFLVVDAAMNDLIRPAMYDAYHDIRPVTAVQTNETAIYDVVGPVCETGDT
FTRGRDMPALKAGDLVAFMSAGAYGAVMGSEYNSRPLAPEVLVRDTNWAVVRPRPAYEEM
MNREVLPEWLRPHRVRAD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattttgacatccgtgacggcgagatgcacgccgagggcgtatcggtccgcgaa
ttggctgaacgcgtcggcaccccgctctacgtttattcgtccgccacgttcgagcggcat
tttcaggtcttctctcaggcactgtgggcccaggacgccctgcaaagccccaagaacgaa
gcgccgctgatcgcctatgccaccaaagccaactccaatctggcggtgctgcaaacgctc
gccgaacagggggccggggccgatacggtgtccgagggcgaaatccgtaaggcgctgacc
gccggtattccgccggagcgtatcgtcttttcgggcgtgggcaagaccgacgccgaaatg
gccttcgcgctgaagaccggcatctatcagctcaatgtcgaatcaaagcccgaactggaa
cgcctcagccacgtggcggcgtctctgggcgtcgtggcccccatcgtcatccgcattaat
ccgggcgtcggcgccggcggtcatgccaagattactaccggcggggccaaggacaagttc
ggcgtatcggcccgcgaagccatctccctctatggtcaggccgccgccgatcccaatatc
gcccccatgggcattgcctgccatatcggcagccagatcacggacctcgcccccatgcag
gccgccttttccaaaatgaagggctgggtgcaggagttgcgcgccagtggcctgagcgtt
gagcgcctcgatctgggcggcgggctgggcgtgccctatttcaacatgccagaaccgccc
tcgcccaacgatttcgcccagatggtggcgctaaccgtcggaaatctcggggtgcgctat
gcctttgagccgggtcgtttgatcgctgccaatgcgggtattctggtgtcgcgcgtcatc
cacattcatgaacgcgaagactctggtcagaagtttctcgtcgtcgatgcggcaatgaac
gacctgatccgccccgccatgtacgacgcctatcacgacatccgcccggtgacggcggtt
cagaccaacgaaaccgccatctatgatgtggtcggcccggtctgcgaaaccggcgacacc
tttacgcgcggccgcgacatgccggcactgaaagccggtgatctggtcgccttcatgtcg
gccggggcctatggggcggtgatgggcagcgagtataattcgcgccccctcgctcctgag
gtgttggtgcgtgacacaaactgggcggtggtgcgtcctcgtcccgcctatgaggagatg
atgaaccgcgaggtcttgccggaatggttaagaccgcatagggtacgggcggactaa
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