Asticcacaulis sp. DW145: ATDW_04760
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Entry
ATDW_04760 CDS
T10232
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATDW_04760 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_04760 (uvrB)
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATDW_04760 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATDW_04760 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
BEV09980
LinkDB
All DBs
Position
1:540220..542391
Genome browser
AA seq
723 aa
AA seq
DB search
MNRSHLARLIFDDGRRHAPETGAQDFPPTLWSPHRPDRPEKSEGGRRFVLHSAYEPAGDQ
PTAIAELVEGANARERDQVLLGVTGSGKTFTMAKVIEQTQRPALILAHNKTLAAQLYSEF
KAFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHAATRAILERDDVI
VVASVSCIYGIGSVETYTAMTFELKVGQTIDEAQLRADLVALQYKRNDAAFERGTFRRRG
DVIEIFPAHYEDRAWRVSLFGDEIEALTEFDPLTGKKTADLKDLKVYAASHYVTPRPTLR
QAIDRIKAELKLRLDQLHAEGKLLEAQRLEQRTTFDLEMMEATGACAGIENYSRYLTGRA
PGEPPPTFFEYLPENALLFVDESHVTVPQIGGMYRGDFARKSVLAEYGFRLPSCMDNRPL
KFEEWEAMRPQTVHVSATPGNWEMEQTGGVFTEQVIRPTGLIDPPVEIRPVSTNGANQVD
DVIAEVREVAKNGYRSLVTVLTKKMAENLTEYMHEQGIRVRYMHSDIDTLERIEIIRDLR
LGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVEGRVILY
ADKMTGSMERALAETSRRREKQMAYNAEHGITPESVKRGISDILDSPYERADRVQVPVGV
AAKDSKPFLGSNFQATLKDLETRMREAAGNLEFEEAARLRDEIKRLKLLDLEFAKDMIGG
DGS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttctcatctcgcccgcctcatttttgacgatggccgccgtcacgcgcccgaa
accggtgcgcaggacttcccgccaaccctttggtcgccgcaccggcctgatcgcccggaa
aagtccgaaggcgggcggcggtttgtattgcattcggcctatgagccggcgggtgatcag
ccgacggccattgccgagctggtcgaaggggccaatgcccgcgaacgcgatcaggtgctc
ctgggcgtcaccgggtcaggcaagacctttaccatggccaaggtgatcgagcagacccag
cgtccggcgctgattctggcacacaacaagacattggcggcgcagctctacagtgagttc
aaggccttctttccggaaaacgcggtcgagtatttcgtttcctactacgactattatcag
ccggaagcctatgtgccgcgtaccgacacctatattgagaaggactcgtcgatcaacgag
cagatcgaccggatgcgccacgcggcgacgcgcgccatccttgaacgcgacgacgtcatc
gtggtggcttcggtgtcgtgcatctacggtatcggttcggtcgaaacctatacggctatg
accttcgagctgaaggtggggcaaaccatagatgaggcgcagttgcgcgccgatctggta
gcgctgcaatacaagcgtaatgacgcggcctttgagcgcggcaccttccgtcgccgcggc
gacgtcatagaaatcttcccggcccactacgaagaccgcgcctggcgggtgtctttgttc
ggcgatgagatcgaggccctgaccgagttcgacccgctgaccggcaagaagacggcggat
cttaaagaccttaaggtctatgccgccagtcactatgtgacgccgcgtccgaccctgcgt
caggccatagaccgcatcaaggccgagttgaagttgcggctggatcagctccacgccgag
ggtaagctgctggaggcgcagcgccttgagcagcgtaccacctttgatctggagatgatg
gaagccaccggggcctgcgcgggtatcgaaaactattcgcgctatctgacgggacgggcg
ccgggcgagccgccgccgactttttttgaatatctgccggaaaacgcgctgttgttcgtc
gatgaaagccacgttaccgtaccgcagatcggcggtatgtatcgcggcgactttgcgcgt
aagtcggtgctggccgaatacggcttccgcctgccgtcatgcatggataaccggccgctg
aagtttgaggagtgggaggcgatgcggccgcagaccgtgcacgtctcggcgacgcccggc
aactgggagatggaacagaccggcggagtctttaccgaacaggtgatccgtccgaccggc
ctgatcgacccgccggtcgaaatccgccccgtttcgactaatggcgccaatcaggtcgat
gacgtgattgccgaggtgcgcgaagtggccaaaaacggctatcgctctctggttacggtg
ctgaccaagaagatggcggaaaacctgaccgaatatatgcacgagcagggcatccgggtg
cgctatatgcactccgacatcgacacgctggagcgcatcgagatcatccgcgacctgcgg
ctgggggcgttcgacgttctggtggggatcaacctgctgcgcgaaggcctcgacatcccc
gaatgtggctttgtggccatacttgatgccgacaaggaaggcttcctgcgttcggaaacc
tcgctgatccagaccatagggcgggcggcgcgtaacgtcgaaggccgcgtcatcctctat
gccgacaagatgaccggctcgatggaacgtgcgctggccgaaaccagccgccgccgtgaa
aagcagatggcctacaatgccgaacacggcatcacgccggaaagcgtcaagcgcggcatt
tccgatattctagatagtccgtatgaaagggcagaccgcgttcaggtgccggtcggcgtg
gcggccaaggactcgaaaccctttctgggctcgaactttcaggcgacgcttaaggacctt
gagacgcggatgcgtgaggcggcgggcaatctggagtttgaagaggccgcgcgcctgcgc
gacgagatcaagcggctcaaactgctcgatctggagttcgccaaggatatgatcggcggc
gatggcagctag
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