Asticcacaulis sp. DW145: ATDW_10190
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Entry
ATDW_10190 CDS
T10232
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATDW_10190 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_10190 (uvrA)
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATDW_10190 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATDW_10190 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
DnaJ_CXXCXGXG
AAA_21
BCA_ABC_TP_C
ATPase
RsgA_GTPase
APS_kinase
CA109-like
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
BEV10523
LinkDB
All DBs
Position
1:complement(1109583..1112516)
Genome browser
AA seq
977 aa
AA seq
DB search
MADSGHDKDMLMSSSNLMQGFIKVRGAREHNLKGVDVDIPRGKLVVLTGLSGSGKSSLAF
DTIYAEGQRRYVESLSAYARQFLELMSKPDVDLIEGLSPAISIEQKTTSKNPRSTVGTVT
EIHDYMRLLWARTGVPYSPATGLPIESQTISQMVDKILALPEGTRLLLLAPFVRGRKGEY
KKEIADLQRQGFQRLKIDGEYYAIEDAPKLDKKYKHDIDVVVDRVVVKGGLMQRLADSLE
TALRLADGLAIAEYADVAEGETEPKRLIFSEKFACPVSGFTIAEIEPRLFSFNNPFGACP
TCDGLGVKLTFDRSLIVPDESLSLKDGAIAPWAKGPSPLYAQTLEALSGHYGFKMDTKWR
ALTPEAQDVILLGSESEKIKFVYQDGSRRYDVTKPFEGVIPNMERRYRETDSSWVREDLS
RYQAETPCEACGGKRLKPEALAVKVNAKDIAEISGLSIKKAHDWFADLQNHLSEKQMDIA
RRILKEILDRLNFLNAVGLDYLNLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPS
IGLHQRDNDRLLDSLKGLRDLGNSVLVVEHDEDAILTADYVIDMGPAAGVHGGQVVAEGT
PDDIKANANSLTGQYLTGKREIPLYFSKDTDNERRPIDKKKMLKVIGARGNNLKNVTGEI
PVGVMTCITGVSGGGKSTFTLETLHKAAARRLNNASANPAVHDKIEGLEFFDKVVEIDQS
PIGRTPRSNPATYTGAFGPIRDWYAGLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKI
EMHFLPDVYVTCDVCKGKRYNRETLEIVFKGHSIADVLDMTVEEGAEAFKAVPSIRDKLE
TLKRVGLGYIKIGQQATTLSGGEAQRVKLSKELSKRATGKTLYILDEPTTGLHFEDTRKL
LEVLHELTDHGNTTVVIEHNLDVIKTADWLLDFGPEGGDGGGEIVAFGTPEKVADNPKSW
TGKYLKDILARHKVRKK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagcggacacgacaaggatatgctgatgagcagctcaaacctgatgcagggc
ttcatcaaggtgcgcggcgcgcgcgagcataacctcaagggcgtcgatgtcgatattccg
cgcggcaagctggtggtgctcaccggcctgtcggggtcgggcaagtcgtcactcgccttc
gacaccatctatgccgaggggcagcggcgttacgtcgagtcgctgtcggcctatgcgcgg
caattccttgagctgatgtcgaagcccgacgtggacctgattgaaggcctgtcgccggcc
atttccatcgagcagaagacgacctccaaaaacccgcgctcgaccgtcgggacggtgacg
gaaatccacgactatatgcgccttctgtgggcgcgcaccggcgtgccctattcgcccgcc
acgggcctgcccatcgaaagccagaccatttcgcagatggtcgataagatcttggccctg
cccgaggggacgcgactgttgctgttggcccccttcgtgcgcgggcgcaagggcgaatac
aagaaagaaatcgccgaccttcagcgtcagggctttcagcgcctgaagatcgacggtgag
tactacgccatcgaagatgctcccaagctcgacaagaagtacaagcacgatatcgacgtc
gtggtggatcgtgtggtcgtcaaaggcgggctgatgcagcgtctggccgacagtctggaa
acggcgctgcggctggccgacggcttggccatcgccgaatatgccgatgtggctgaaggc
gagaccgaaccgaagcgcctgatcttttccgaaaaattcgcctgcccggtgtctggcttt
accattgcggagattgagccgcgcctgttctcgttcaacaatccgttcggcgcctgcccg
acctgcgacgggctgggggtcaagctgacctttgaccgctcgctgatcgtgccggatgag
tcgttgagcctcaaggacggggccattgcgccgtgggccaagggcccctcgccactgtac
gcgcagacgcttgaggccctgtccgggcattacggcttcaagatggacaccaaatggcgc
gccctgacgccggaagcgcaggacgtgatcctgctggggtccgaatcggaaaagatcaag
ttcgtctatcaggacggctcgcggcgctacgacgtgaccaagccgttcgaaggcgtcatc
cccaatatggagcgccgctaccgcgaaaccgactcgtcctgggtgcgcgaggacctgagc
cgttatcaggccgaaaccccgtgcgaggcctgcggcggcaagcgcctcaagcccgaggcc
ctggccgtcaaggtcaatgcgaaggacatcgccgaaatctccggcctgtcgatcaagaag
gcacacgactggttcgccgatctgcagaaccatctgagcgaaaagcagatggatattgcg
cggcgcatcctgaaggaaattctcgaccgcctgaacttcctcaatgcggtggggctcgac
tatctcaacctgtcgcgcaattccggcaccctgtccggcggcgaaagccagcgtatccgt
ctggcctcacagatcggttcgggcctgaccggcgtgctctacgtgctggatgaaccctcg
atcggtctgcatcaacgcgacaatgaccgcctgctcgacagcctgaaagggctgcgcgat
ctgggcaattcggtacttgtggtcgaacacgacgaagacgccatccttaccgccgactat
gtgatcgacatgggcccggcggccggtgtgcacggcggtcaggtggtggccgagggcacg
cccgatgacatcaaggccaatgccaactcgctgaccgggcaatatctgaccggcaagcgc
gaaatccccctctacttctcgaaggatacggacaatgagcgccgccccatcgacaagaag
aagatgctgaaggtcatcggggcgcgcggcaacaatctgaaaaacgtcaccggcgaaatt
ccggtgggcgtcatgacctgcatcaccggtgtttccggtggcggcaaatcgaccttcacg
ctggaaaccctgcataaggcggcggcgcgacgcctcaacaacgcctccgccaatcccgcc
gtccacgacaagatcgaggggctggagtttttcgacaaggtggtcgagatcgaccagtcg
cccatcggccgcacgccgcgttccaacccagccacctatacgggggccttcgggccgatc
cgcgactggtacgccggcctgccggaatccaaggcgcgcggctacggaccgggccgcttc
tccttcaacgtcaagggcggccgctgcgaagcctgtcagggcgacggcgtcatcaagatc
gagatgcacttcctgcccgacgtctatgtcacctgcgatgtgtgcaagggcaagcgctat
aaccgcgagacgctggagatcgtcttcaagggccattccatcgccgatgtgctggacatg
acggtcgaggaaggcgccgaggccttcaaggccgtgccttcgatccgtgacaagctggag
acgctgaagcgcgtcggtctgggctatatcaagatcggccagcaggcgaccaccctgtcg
ggcggtgaggcgcagcgcgtcaagctgtcgaaagagctgtcgaaacgcgccacgggcaaa
accctgtatattctcgacgaaccgaccacggggctgcattttgaggatacgcgcaagctg
ctggaagtgctgcacgagctgaccgaccacggcaacacgaccgtggtgatcgagcacaat
ctggacgtcatcaagacggccgactggctgctcgacttcggcccggaaggtggtgacggc
ggcggcgagatcgtggccttcggcacgccggaaaaggtggcggacaatccgaagtcgtgg
accggcaaatacctgaaagacattctggcccggcacaaggtgcggaaaaaatag
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