Asticcacaulis sp. DW145: ATDW_12110
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Entry
ATDW_12110 CDS
T10232
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ATDW_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_12110
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ATDW_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BEV10715
LinkDB
All DBs
Position
1:1332601..1333473
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AA seq
290 aa
AA seq
DB search
MALRPYWSGNLRLSLVTLPVNVYSALNRSRQIPLKEIYRKTGERVHRLNVTEDGTEVERD
EIIKGYEVEKGEYVLIEPDEIKDLKIPSSRTLDIVQFVPAEEIDDLYFDAPYFVAPQKNA
DQQTFAVIRDALRQSKTTGIGQLAIAGRERLCTIRPCGSGLILQTLRYENELRDSDPYFD
DITKKAAASEELDLARELIKRKTAKFDPGRFHDHYREALQELIEAKVENREPVAVEEDRP
AAKVINLMDALRKSLKDPEPAPPKAEKGTPKTSAKRKKTLAKTAAREKAS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgcccctactggagcggcaatctgcgactgtcgctcgttacgctgcctgtc
aatgtctattcggcgctcaaccgttcgcgtcagattccgctgaaagaaatctatcgcaag
acgggcgagcgcgtgcaccggctcaatgtcaccgaagacggcaccgaggtcgaacgcgac
gagatcatcaaggggtatgaggttgaaaagggcgagtacgttttgatcgagccggacgag
atcaaggacctgaaaatcccgtcatcgcgcacacttgatatcgtgcagttcgtccccgcc
gaagagattgacgacctctatttcgacgcgccatacttcgtcgcgccgcagaaaaacgcc
gatcaacagacctttgccgtcattcgcgacgcgctaaggcaatcaaagacgaccggcata
gggcaactggctatcgccgggcgtgagcgcctgtgcaccatccggccgtgcggctcaggc
ctgatactccaaacccttcgctacgaaaatgagttgcgcgactccgacccctatttcgac
gacatcacgaaaaaggcggcggcctccgaggaacttgatctggcgcgcgaactgatcaag
cgcaaaaccgcgaagttcgatccgggtcgcttccacgaccactaccgtgaagctttgcaa
gagctgatcgaggccaaggtggaaaaccgcgagccggtcgctgttgaagaggaccggccg
gcagccaaggtcatcaacctgatggatgccctgcgcaagagcctgaaagaccctgaaccg
gcgccgccaaaggccgaaaagggtacgcccaaaacttctgccaaacgcaaaaagaccctc
gcaaagacggccgcccgcgagaaggccagctag
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