Asticcacaulis sp. DW145: ATDW_12530
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Entry
ATDW_12530 CDS
T10232
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATDW_12530 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astd03019
]
ATDW_12530 (groL)
03110 Chaperones and folding catalysts [BR:
astd03110
]
ATDW_12530 (groL)
03029 Mitochondrial biogenesis [BR:
astd03029
]
ATDW_12530 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
astd04147
]
ATDW_12530 (groL)
Enzymes [BR:
astd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ATDW_12530 (groL)
Messenger RNA biogenesis [BR:
astd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ATDW_12530 (groL)
Chaperones and folding catalysts [BR:
astd03110
]
Heat shock proteins
HSP60 / Chaperonin
ATDW_12530 (groL)
Mitochondrial biogenesis [BR:
astd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ATDW_12530 (groL)
Exosome [BR:
astd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ATDW_12530 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ATDW_12530 (groL)
Exosomal proteins of breast cancer cells
ATDW_12530 (groL)
Exosomal proteins of colorectal cancer cells
ATDW_12530 (groL)
Exosomal proteins of bladder cancer cells
ATDW_12530 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BEV10757
LinkDB
All DBs
Position
1:1394121..1395764
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVLFSSDARDKILRGVNVLANAVKVTLGPKGRNVILEKSFGAPRSTKDGVSVAKEI
ELADKFENLGAQLIREVASKTNDKAGDGTTTATVLAQAIAVEGLKSVSSGRNPMDLKRGI
DKAVAVAIAEIKASSKPVTSNSEIAQVGTISANGDTEVGQMIADAMAKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNPDKMEAVLEDPYILIFDKKISTLQPILPILEAV
VQSGRPLLIIAEDVEGEALATLVVNRLRGGLRVAAVKAPGFGDRRKAMLEDIAILTAGQV
ISEDIGIKLETVTLDMLGRAKKVTITKETTTVVDGVGEKAEIEGRVAQIKQQIEETTSDY
DKEKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVDEGIVPGGGTALL
KASKKLADLTGDNDDQTAGIAIVRKALQAPIRQISENAGVEGSIVVGKVLESNEANFGFN
AQTEKYVDLVADGVIDPAKVVRTALQDAASVSGLLITTEAAVVEAPKKEAAPAMPGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtactgttttcctcggacgcgcgcgacaagatcctgcgcggcgtc
aatgtcctcgccaatgccgtgaaggtcacgcttggccccaagggccgcaatgtcatcctt
gaaaagtcgttcggcgcgccgcgctcgaccaaggacggcgtctcggtcgccaaggaaatc
gaactggccgataagttcgaaaacctgggcgcgcaactgatccgtgaagttgcctccaag
accaacgacaaggccggtgacggcaccacgaccgccacggttctggctcaggccatcgcc
gtcgaaggtctgaagtcggtgtcttcgggccgcaacccgatggacctgaagcgcggtatc
gacaaggccgtggccgttgccatcgccgaaatcaaggcttcgtccaagcccgtcacctcg
aactcggaaatcgctcaggtcggcaccatctcggccaacggcgacaccgaagtcggtcag
atgatcgctgacgccatggccaaggtcggcaacgaaggcgtgatcaccgtcgaagaagcc
aagaccgccgaaaccgagctggacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcgtcaccaacccggacaagatggaagcggtcctcgaagacccgtacatc
ctgatcttcgacaagaagatctcgaccctgcaacccatcctgccgatcctcgaagccgtg
gttcagtcgggccgcccgctgctgatcatcgccgaagacgtcgaaggcgaggctctggcc
acgctcgtcgtcaaccgcctgcgtggtggcctgcgcgtcgccgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccgccggtcaggtg
atctccgaagacatcggcatcaagcttgagaccgtgaccctcgacatgctgggccgcgcc
aagaaggtgacgatcaccaaggaaaccaccaccgtggtcgatggcgtcggtgaaaaggcg
gaaatcgaaggccgcgtggctcagatcaagcaacagatcgaagaaaccacctcggactac
gacaaggaaaagctgcaagagcgtctggccaagctggccggcggcgtcgcggtcatccgc
gtcggcggctcgaccgaagtcgaagtgaaggaaaagaaggaccgcgtcgatgacgccctg
aacgcgacccgcgcggccgtggacgaaggtatcgttccgggcggtggtacggctctgctg
aaggcgtcgaagaagctggccgacctgaccggcgacaatgacgatcagaccgccggtatc
gccatcgtgcgcaaggctctgcaggctccgatccgtcagatctcggaaaacgcaggcgtc
gaaggctcgatcgtcgtcggcaaggtgctggaatcgaacgaagccaacttcggcttcaac
gctcagaccgaaaagtacgtggacctggtcgccgatggcgtcatcgacccggccaaggtt
gtgcgtaccgctctgcaagacgccgcttcggtgtcgggcctcttgatcacgacggaagcc
gccgtggtcgaagccccgaagaaggaagcggccccggctatgcccggcggcggcatgggc
ggcatgggcggtatggacttctaa
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