Asticcacaulis sp. DW145: ATDW_18150
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Entry
ATDW_18150 CDS
T10232
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03030
DNA replication
astd03410
Base excision repair
astd03420
Nucleotide excision repair
astd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATDW_18150 (polA)
03410 Base excision repair
ATDW_18150 (polA)
03420 Nucleotide excision repair
ATDW_18150 (polA)
03440 Homologous recombination
ATDW_18150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astd03032
]
ATDW_18150 (polA)
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_18150 (polA)
Enzymes [BR:
astd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATDW_18150 (polA)
DNA replication proteins [BR:
astd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATDW_18150 (polA)
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ATDW_18150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATDW_18150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BEV11319
LinkDB
All DBs
Position
1:complement(1995305..1998166)
Genome browser
AA seq
953 aa
AA seq
DB search
MSPKRLVLIDGSGYIFRAYHGLPPLTRKSDGLPVGAVSGFCNMLYKLIKENRGDDAPSHL
AVIFDAGAHTFRNDLYDQYKAHRPPPPEDLIPQFPLIRQATKAFGIHNVELLGFEADDLI
CTYAHLAVQQGFEVTIISSDKDLMQLVNDHVSMLDPVKGTHVGREQVIEKFGVPPELVVD
AQALIGDSTDNVPGAPGIGIKTAAQLILEYGSLDALLERAHEIKQPKRREALTDFRDQIL
MSRELVRLRCDVPPPCPIEEFALKDPNAAELGAFLAEMEFTSLARRVGGSLATLETAQAT
PRDLTAPVSKPLFGTTAQVSAPRPATPEALLTPVDYGAYQCVQDIEALKAYLAQCRAAGV
FAVDTETDSLSATASGLVGVSLSCAPGSGVYIPLAHQSDDGGLALSGDELKQIALVEALA
ELKPLLEDPTVLKVGQNIKYDLSVFARYGIRVAPYDDTLLISYVLEGGLHGHGMDELSEL
HLGHTPIPFKQVAGTGKSAKSFKFVDLKPATEYAAEDADITLRLWHVLKPQLAQKRLLTV
YETLERAMPTVLSDMELAGVRIDPQVLRILSQDFGVRMGEIEAEAHTVAGHPFNLNSPQQ
LGAIFFDEMALPGGKKTATGQWATDVKVLEEIADKGTHDQAQRLARLLLDYRQMAKLKGT
YTDALVEYADPQTHRIHTSYQLASTTTGRLSSNEPNLQNIPIRTLEGRKIRTAFVARPGH
KLISADYSQIELRLLAHIGDIGQLKKAFQDGIDIHALTASEMFGVPVEGMPSEVRRRAKA
INFGIIYGISAFGLGNQLGIDNQEAGRYIKTYFERFPGIKAYMDAAKEQVKATGYVETIF
GRRIHIPDIHAKSAGQRAFAERAAINAPIQGTAADIIRRAMIRMPGALEAAGLTTTMLLQ
VHDELIFEAPEAEVEAAKAVIVRVMKHAALPALDISVPLEVEAKAADNWDEAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccaaacgcctcgtcctgatcgacggttccggctatatcttccgcgcctatcac
ggcctgccgcccctgacgcgcaagtccgatggcctgccggttggggccgtgtcgggcttt
tgcaacatgttgtataagctcatcaaagagaaccgcggcgacgatgcgccgtcgcatctg
gcggtgattttcgacgccggggcgcacaccttccgcaacgacctctatgatcagtataag
gcgcaccgtccgccgccccccgaagatctgatcccgcaattccccctgatccgtcaggcg
acgaaggcctttggcatccacaatgtcgagcttctgggctttgaagccgatgacctgatc
tgtacctatgcccatctggccgtgcagcaggggttcgaagtcaccatcatctcgtccgac
aaggacctgatgcaactggtcaacgatcacgtctccatgctcgatccggtcaagggcacg
catgtcgggcgcgagcaggtgatcgaaaagttcggcgtgccgcctgagctggtcgttgat
gcgcaggccctgatcggcgattcgaccgacaatgtccccggtgcgcccggcatcggcatc
aagaccgcagctcagcttatcctcgaatacggctcgctcgatgcgctgcttgaacgcgcg
catgagatcaaacagccgaaacgccgagaggccctgaccgacttccgcgatcagatactg
atgtcgcgtgagctggtgcgcctgcgttgcgatgtgccgccgccgtgccccatcgaggaa
tttgccctgaaagacccgaacgccgccgaactgggggcgtttctcgccgagatggagttc
acctctctggcgcgtcgcgtcggcgggtcgctggcgacgctcgaaacggcgcaggccacc
ccgcgcgacctcacggcacccgtgtccaagcccctgttcggcaccacggctcaggtgagc
gcgccgcgcccggccacccccgaagcgctgctgacaccggtcgattatggcgcctatcag
tgtgttcaggacatagaggcgctgaaggcctatctggcgcaatgccgcgcggcgggggtg
tttgccgtcgatacggaaaccgactcgctgtcggccacggcgtcgggtctggtcggcgtt
tctctgagctgcgcgcctgggtcgggcgtctatatcccgctggcgcaccagtcggacgat
ggtggcctggccctgtccggggatgagttgaaacagatcgccctggtcgaggctctggcc
gaactgaagccgctgctcgaagacccgacggtgctgaaggtggggcagaatatcaaatac
gacctgtcggtctttgcgcgttacggcatccgcgtcgcgccctatgacgacaccctgctg
atttcctacgtgctcgaaggcggcctgcacgggcacggcatggatgagctgtcggaactg
catctgggccacacgcccatcccgttcaagcaggtcgccggcacgggcaagagcgccaaa
tcgttcaaattcgtcgatctgaaacccgccaccgaatacgccgccgaagacgccgacatc
acgctgcgtctgtggcacgtgcttaagccgcaactggcgcaaaagcggcttctgaccgtc
tatgagacgctggaacgcgccatgccgacggttctgtcggacatggaactggcgggcgtg
cgcatcgacccgcaggtgctgcgcattctgtcgcaggactttggcgtgcgtatgggcgag
atcgaggccgaggcgcacaccgtggccggccatccgttcaacctcaattcaccgcagcaa
ctgggggccatcttcttcgatgaaatggccctgcccggcggcaagaagaccgcgacgggt
cagtgggcgaccgacgtcaaggtgctggaagagatcgccgataagggcacgcacgatcag
gcgcaacgtctggcgcgcctgctgctcgattatcgtcagatggccaagctgaaaggtacc
tatacggacgctctggtcgaatatgccgatccgcagacccaccgcatccatacctcctat
caactggcttcgaccacgacgggccgcctgtcgtccaacgaacccaacctgcaaaatatc
cccatccgcacgctggaagggcgcaagatccgcaccgccttcgtggcgcgtccgggccac
aagctgatctcggctgactactcccagattgaactgcgcctgctggcccatatcggtgac
atcggccagcttaaaaaagcgtttcaggacggcatcgacatccacgccctgacggcgtct
gaaatgttcggcgtcccggtcgaaggcatgccgtccgaagtgcggcgccgcgccaaggcc
atcaatttcggcattatctacggcatttcggcctttggtctgggcaatcagctcggcatc
gacaatcaggaggccggtcgctacatcaagacctatttcgagcgcttccccggcatcaag
gcctatatggacgccgccaaggaacaggtgaaggcgacgggctatgtcgaaaccatcttc
ggccgccgcatccacatccccgacatccacgccaagtcagcgggccagcgtgcctttgcc
gaacgcgcggcgatcaatgcgcctattcagggcaccgccgccgacatcatccgccgcgcc
atgatccgtatgccgggcgcgctcgaagcggcgggcctgaccaccaccatgctgcttcag
gtgcacgacgaactgatcttcgaagcccccgaagccgaggtcgaggccgccaaagcggtg
atcgtcagggtgatgaaacacgcagccctcccggcgctcgatatctccgtgccgctggag
gtcgaggccaaggcagcggacaactgggacgaggcgcactga
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