Asticcacaulis sp. DW145: ATDW_22050
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Entry
ATDW_22050 CDS
T10232
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
astd Asticcacaulis sp. DW145
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astd03032
]
ATDW_22050
03036 Chromosome and associated proteins [BR:
astd03036
]
ATDW_22050
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_22050
DNA replication proteins [BR:
astd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATDW_22050
Chromosome and associated proteins [BR:
astd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ATDW_22050
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ATDW_22050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_1
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
BEV11709
LinkDB
All DBs
Position
1:complement(2456394..2456690)
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AA seq
98 aa
AA seq
DB search
MLKSELIERLASEYPHMTQKDVERIVNLILESMIETLEKGGRVELRGFGAFSVRSRPARV
GRNPRTGEAVSVPAKHVPFFKSGKELRERLNLSGDDNE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatcggaactgatcgagcgtttggcgtccgaatatccgcatatgacgcaaaaa
gacgtcgaacggatcgtcaatctgattctggaatccatgatcgagacgctggaaaaaggt
ggtcgcgtcgaactgcggggctttggcgctttttcagtgcgttcgcgcccggcacgagtg
ggccgaaatccgcgcaccggggaagcggtttctgttcccgcaaagcacgtccccttcttt
aaaagcggcaaggaactgcgtgagcgtctgaacctgtcgggcgacgataacgaataa
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