Asticcacaulis sp. DW145: ATDW_22190
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Entry
ATDW_22190 CDS
T10232
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATDW_22190 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_22190 (mutM)
Enzymes [BR:
astd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ATDW_22190 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ATDW_22190 (mutM)
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATDW_22190 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-H2C2_2
Motif
Other DBs
NCBI-ProteinID:
BEV11723
LinkDB
All DBs
Position
1:2473880..2474761
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AA seq
293 aa
AA seq
DB search
MPELPEVETVRRGLLPALEHARLSGVRLHRPNLRYAFPEGFAARLEEAEILRLERRAKYL
LFYLDTQEVWVTHLGMTGRFQVSDIDGQSLPLDGNYYHALRPDPKHLHVQVLASKDGVTR
LIDFYDPRRFGFMLLLRPDELYAQGWYKGLGLEPLSDALSADALYALFHPRRPPLKSLLM
DQTLISGLGNIYVCEALWRAGLSPDLPGDQLSHAKAAELTLAVREVLEEAVAAGGSSISD
FASASGELGYFQHRFRVYDREDEACLRPGCAGTIARKTHSGRSTFYCPACQKS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcctgaagtcgaaaccgtccgtcggggcctgttgccagcgctggaacat
gcgcgcctgagcggtgtacgtctgcaccggcccaatctgcgctatgccttcccagaaggc
tttgctgcgcgcctcgaagaggcagaaatcctgcgactggagcgacgggccaaatacctg
cttttctacctcgacacgcaagaggtttgggtaacccatcttggcatgaccggtcgcttt
caggtcagcgacatcgacggccagagccttccccttgacggtaactattaccacgccctg
cgccccgaccccaagcacctccacgttcaggtgctggccagcaaagacggcgtcacccgt
ctcatcgacttctacgacccgcgccgcttcggcttcatgctgttgctgcgcccggacgaa
ctctatgcgcagggctggtataaggggctgggtcttgaacccctgtcagacgcgctgagc
gccgatgccctttatgccctgttccatccgcgccgcccgccgcttaaaagcctgctgatg
gatcagacgctgatatcggggcttggcaatatctacgtctgcgaagccctgtggcgggct
ggcttgtcgccggatctgccgggtgaccagctgagccacgctaaggccgccgagctgacc
ctcgccgtacgtgaggtgctcgaagaagcggtcgccgccggcggctcgtcgatcagcgat
tttgcgtctgcctcaggggagcttggttattttcagcaccgtttccgcgtctatgaccgc
gaggacgaagcctgtttgcgaccgggttgcgcaggcaccattgcccgtaaaacccattct
ggacgctcgactttttactgtccggcgtgccagaaaagttaa
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