Asticcacaulis sp. DW145: ATDW_34700
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Entry
ATDW_34700 CDS
T10232
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03030
DNA replication
astd03430
Mismatch repair
astd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATDW_34700
03430 Mismatch repair
ATDW_34700
03440 Homologous recombination
ATDW_34700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astd03032
]
ATDW_34700
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_34700
Enzymes [BR:
astd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATDW_34700
DNA replication proteins [BR:
astd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATDW_34700
DNA repair and recombination proteins [BR:
astd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATDW_34700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BEV12974
LinkDB
All DBs
Position
pASDW145_1:complement(140235..141212)
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AA seq
325 aa
AA seq
DB search
MASQLDMFGVPSNAPVTKPVRKPKATSKRLSLKDVSEDDIARHLEMTGRYRILRQIRPRD
VCESPRPGFPLIGAIVDTETTGLNKGEDEVIEIGVIAFRFNPEGQVGDVIDVYSSLHQPS
RPIPSEITALTGITDEMVRGRSINLDALERIVLPADLIIAHNAGFDRPFCERLSHVFASK
PWACSNEEVDWKGRGFEGTKLGYLINQAGFFHNGHRAVDDCFALLEVLLQPGLHELTPFA
ELYRASQRERIRIWAEYSPFDKKDVLKARGYRWSGGEGATPKAWWTEVDAELFDSEIKFL
EAEIYNRSDVDLTSRRLTAVDRFKG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaactcgacatgtttggcgtcccctccaatgcgcccgtaaccaaaccagtc
cgcaagcccaaagcgacttcaaaacgtctgagtttgaaggatgtctctgaagatgacata
gctcgacatttggaaatgacgggacgataccgaatattacgacagattcggcctcgtgac
gtttgcgagtcgcctcgacccggattccctctcattggcgcaatcgtcgacactgagacc
acgggtctgaacaaaggcgaggacgaagtcatagagatcggggttattgcctttcggttt
aatcccgaaggtcaggtcggcgacgtaatcgacgtctacagctctctgcatcaaccatct
cgacctattccgtcagagattacagctttaaccggaattaccgatgagatggtaagagga
cgctcgatcaatctcgatgccttggaacggattgttcttccagccgacctgatcatcgcg
cacaatgcaggctttgacagaccattttgtgagcgcttgtcccatgtcttcgcgtcaaaa
ccgtgggcgtgctccaacgaggaagtggattggaaaggtcgtggtttcgaagggacgaaa
cttggctatctcatcaatcaagctggcttttttcataacggacaccgggcagtcgacgac
tgtttcgccttactggaagttttgttgcaaccgggccttcatgaactgacgccttttgcc
gaactttatcgggcgagccaacgcgagcgaatccggatttgggcagaatatagccccttc
gataaaaaggacgtcttaaaagccagaggctaccgttggtctggcggggaaggggcgacg
cccaaggcctggtggacggaggttgatgcagagctctttgattctgagatcaaatttctc
gaagcggagatttataaccgcagtgatgttgacctcacgtcgcggcgattgaccgctgtc
gaccgtttcaaaggataa
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