Anopheles stephensi (Asian malaria mosquito): 118503706
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Entry
118503706 CDS
T08252
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118503706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aste03021
]
118503706
03019 Messenger RNA biogenesis [BR:
aste03019
]
118503706
Transcription machinery [BR:
aste03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118503706
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118503706
U7-dependent histone pre-mRNA processing factors
118503706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
INTS7_N
Motif
Other DBs
NCBI-GeneID:
118503706
NCBI-ProteinID:
XP_035893162
LinkDB
All DBs
Position
2:complement(85656569..85660747)
Genome browser
AA seq
1192 aa
AA seq
DB search
MENLLRGSSSFSEAAMLFTDEKIASARSKIVEALNETQTAKIPQKCEIIAKVQELLLHTD
VELLNEFLENILVLAHDPAGDVRKAIAGFIEEVCKQHIALLPKVVGTLFSLLRDSIPNVT
KRVIQGCGSIYRLAIQWICQLDDIPEEVEQAWNTLCLMKISILDMIDDDNDGIRTNAIKF
LEGVVILQTYPDEDSVKRANDFSLADVPLTMKQIRRRKLEDEATNIFELLLQFHGASHIS
SVNLIACTGTLCTIAKLRPTTMTRVVEALKHLHSNLPPTLTNSQVSSVRKNLKMQFLNLL
KHPASFEHQATIAQILVDLGASNGEITRAIPKMDKKEQQRRAKRALENSMASQLAAKRAK
LDGPMRKDKDDGSAEVRDQPRTMEIDYDELNEQKNRSNRQNEQFLLDVLPKTELIAQLVI
ANMDKLTDQMLQSAKPTAVLSVEQYIQKIAQALAVQMSEVKAGPGASAFTKDPPMKVRIS
DEEEKNIILSGKRKLGDSSAERSSTPTTTDQADDELPDGGAGDEEEDDEALSEEDRKKLE
ATRKLRETLERVKGGTAGGGEPKQRQRIKQLKLQEITKPLPKATKEAFLIDAVARILKAE
RQALIGGVSTQRQRIITAFGSSFVNPVRDVIMEHILEDLPKRIDLAFSWIFEEYGLMQGF
TRYTHVKHDNGPQYPYTQLLMRLVTNIIDRPRETFRQKESLLKRIYLEAPMLPQELFDTL
VRMCELEELADCGMQIVKDLLIRRPPKERQYLGILLKYAYYENGTIREKAIEYVMNVFAV
HRIMTEEIEKNALAWLAHLEQENPSESMFAVEYGRAEHPRTWTEELAKVCLGLFLEVMVY
DQTLLMRFSEVYIKATSEMKRAVIRAIEGPIRKIGSESEELLRLIEQCPKGSETIIIRII
YILTEKSLPSADLVERVRTLHQTKVSDVRLLIPVINGLTKKEILNALPKLIKLNPGVVKE
VFNRLLGIGVEYGAAELPLNPVELLVALHTIETSKVELKFIVKATSLCLAEKDVYTHDVL
GSVMQQLVEISPLPTLLMRTVIQSLTLHPRLAGFVTNLLQRLILKQVWKQKVVWDGFLKC
AQRLTPQSLGILIQLPAQQLQDAITICPEFREPMLEHAREIMEHQIGHVSQQVMDVLLGI
SPYSTTESSDLQVVSNYSEEAPMSSHMPVKIKLEKDADPPAVTPTPATQVKE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctactgcggggatcgtccagcttcagcgaagcggcaatgctgtttaccgat
gaaaagattgccagcgcaagaagcaagatcgttgaagcattgaacgaaacgcaaacagca
aagatcccccagaagtgtgaaatcattgcaaaagtgcaagagctgctgctgcacacggac
gtggaactgttgaatgagtttctcgaaaacatactagtccttgcgcacgatcccgctggc
gatgtgcggaaagcgatcgccggtttcatagaggaagtatgcaaacagcacatcgcattg
cttccgaaggtagttggcacgctgttttccctgctccgagactccatcccgaacgtaacg
aaacgggtgattcagggctgtgggtctatctaccgattggcgatacaatggatctgccag
ctggacgacatcccggaggaagtggaacaggcgtggaacacgctgtgcctcatgaagatt
tccatcctggacatgatcgatgacgataacgatggaattcgaacgaatgcgatcaagttt
ctggagggtgtggtgattctacaaacctaccccgacgaggatagtgtaaagcgtgcgaac
gacttctcactcgcggatgtgccactcacgatgaaacagatccgcagacgcaagctggaa
gatgaagcgaccaacatttttgagctgctactacagtttcacggtgcgtcacacatttct
tcggtgaatttgatcgcctgtacgggcacgctgtgcaccatcgcgaagctgcgtccaacc
acaatgacgcgcgtagtggaggcactgaagcatttgcactcaaatttaccgccaacgcta
accaactcgcaggtcagctcggtgcgtaaaaacttgaagatgcagttcctaaacctgctc
aaacatccggccagcttcgaacaccaggcgacgatcgcacagattctggtcgacctgggc
gcgtcgaatggcgagataacgcgtgcaattccaaagatggacaaaaaggaacagcaacgc
cgtgcaaagcgggcgttagaaaactcgatggcatcgcagcttgccgccaaacgtgccaaa
ctggacggaccgatgcgaaaggacaaggacgacggttcggctgaagtgcgtgatcagccg
cgcaccatggagatcgattacgacgagctgaacgaacagaaaaatcgttccaaccggcag
aatgaacagttccttctggatgtgttaccgaagacggagctgatagctcagctggtcatt
gcaaacatggacaaacttaccgaccaaatgctacaaagcgcaaagcccactgcggtgctt
tcggtcgagcaatacattcagaagattgcacaagcgttggccgttcagatgagtgaggtg
aaggccggtccgggtgcgtctgccttcacaaaggatcccccgatgaaggtacgcatcagc
gacgaggaagagaagaatattatcctttccggcaaacgcaagctgggcgattcatccgcg
gaacgatcatccacaccgaccaccaccgatcaggcggacgatgaactgccggacggagga
gcgggcgatgaagaggaagacgacgaggcgctttccgaggaggaccgcaagaagttggag
gcaacgcgtaagctacgcgaaacgctggaacgtgtcaaaggtggcacggcgggcgggggc
gaaccgaagcaaaggcagcgcatcaaacagcttaagctgcaggaaatcacaaaacctctc
ccgaaagccaccaaggaagcgttcctgatcgatgcagtggcgcgaatactgaaggcggaa
cggcaagccctgatcggtggggtcagcacgcagcggcagcgcattataacggctttcgga
tcgtccttcgtaaatcccgtgcgggacgtgatcatggaacacattctggaggatctcccg
aaacgaatcgatctcgcgttctcgtggatctttgaagagtacggtctgatgcagggcttc
acccggtacacgcacgtcaagcacgataatggcccgcagtatccctacacccagctactg
atgcgcctcgtgacgaacataatcgatcgtccgagggagacgttccgccagaaggaatcg
ctgctgaagcgcatctacctagaagccccgatgctcccgcaggaactgttcgacacgctt
gtgcgtatgtgcgagctggaagagctagccgactgtggaatgcagatcgtgaaggacctg
ctaatccggcggccaccgaaagaacgtcagtatctgggcattttgctcaagtacgcgtac
tacgaaaatgggacgatccgcgagaaagccatcgagtacgtaatgaacgtgtttgccgtc
catcgcatcatgacggaggagatcgaaaagaatgcactcgcctggctggcgcacctggag
caggaaaacccgtccgaatcgatgtttgcggtggagtatggacgcgccgaacatccgcgc
acctggacggaagagctggcgaaggtgtgccttggcctgtttctcgaggtgatggtgtac
gatcaaacgctgctaatgcgcttctcggaggtgtacattaaggcgacgtccgagatgaaa
cgggccgtgatacgagcgatcgagggcccgatacggaagattggttcggaaagcgaggaa
ctgctgcgactgatcgaacagtgtccgaagggatcggaaacgatcatcatacgtattatt
tacatactcacggagaaatcccttccatcggcggacctggtcgaacgggttcgcacgctg
caccaaacgaaggtgtccgacgttcgattgctcattccggtcataaatgggctaacgaag
aaggaaatccttaacgcgctgcccaaactcatcaagctgaatccgggcgtggtgaaggaa
gtgttcaatcgactgctggggatcggtgtcgagtatggggcggcagagctaccgctaaac
ccggtcgagctgctcgtagcactgcacacaatcgagacgagcaaggtggagcttaagttt
atcgttaaagcaacctccctgtgcctggccgagaaggacgtgtacacgcacgatgtgctg
ggcagcgtgatgcagcagctggtggagatttcgcccctcccaacactgctcatgcgaacc
gtcattcaatcgcttacgcttcacccgcgactggccgggttcgtgacgaatctgttgcag
cggctcatcctcaagcaggtgtggaagcagaaggtcgtctgggatgggtttctcaagtgc
gcccagcggctgacgccccaaagcctgggcatactgatacagttgccggcccagcagctg
caggatgcgatcacgatctgtcccgagtttcgcgaaccgatgctggaacatgcgcgggaa
attatggagcatcagattgggcacgtgtcgcagcaggtgatggatgtgctgctgggcata
tctccgtactcaaccaccgaatcgtccgatctccaggtcgtgagcaactacagcgaagaa
gcaccgatgtcgtcccacatgccggttaaaataaagctcgaaaaagacgccgacccgccg
gcggtcacaccgacaccggcaacacaagttaaagagtaa
DBGET
integrated database retrieval system
