Anopheles stephensi (Asian malaria mosquito): 118504059
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Entry
118504059 CDS
T08252
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03022
Basal transcription factors
aste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118504059
09124 Replication and repair
03420 Nucleotide excision repair
118504059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aste03021
]
118504059
03400 DNA repair and recombination proteins [BR:
aste03400
]
118504059
Enzymes [BR:
aste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118504059
Transcription machinery [BR:
aste03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118504059
DNA repair and recombination proteins [BR:
aste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118504059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
118504059
NCBI-ProteinID:
XP_035893986
LinkDB
All DBs
Position
2:12182966..12185713
Genome browser
AA seq
815 aa
AA seq
DB search
MGPPKKSSKKDKSGSGSGSASGFVENKWNKKRRTEDEAYAAFADDDDSNLGESDFVPDAA
TKNAEKNDDAIQEDEYGAKDYRSQMELKPDNESRPLWVAPNGHIFLESFSPVYKHAHDFL
IAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTTIPEGIVEFIRLCT
LSYGKVKLVLKHNKYFVESPHPEVLQKLLKDPVIQSCRLRRTEEEGGDGFIKQTLEKGKA
ITAFGQTKLPAGQTVLPTGTAAAETAADGAEPVPEEATVPEDITNFYDKMDNEEEEEEAN
LNTVSFEVNQEKIEVLQKRCIEIEFPLLAEYDFRNDTINADINIDLKPAAVLRPYQEKSL
RKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTA
DDSMICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVH
TIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGYIAR
VQCAEVWCPMAPEFYREYLIAKTSKKMLLYVMNPAKFRACQYLIRYHEKRGDKTIVFSDN
VFALKHYAIKMNKPYIYGPTSQNERIQILQNFKFNPKVNTIFVSKVADTSFDLPEANVLI
QISSHGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFLVNQG
YSYKVITHLAGMESDPDLFYKTREEQGQLLQQVLSATDMDCEDERMPGDGTGVPRPGGSK
RMGGLSSMAGADDAIYYEARKKSAHQHPLFKKFRC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgccgaaaaagtcctccaaaaaggataaaagtggttccgggtcgggcagtgcg
agcgggttcgtcgagaacaaatggaacaaaaagcgccggacggaggatgaagcgtacgcc
gccttcgcggacgatgacgacagcaacctgggcgagagcgatttcgtgccggatgcggcc
accaagaacgcggaaaagaatgacgacgccatccaggaggatgagtacggtgcgaaggac
tatcggtcgcagatggagctgaagccggacaatgaatcgcgaccgctgtgggttgcaccg
aacgggcacatcttcctggaatcgttctccccggtgtacaaacacgcgcatgactttctc
attgccatttcggaaccggtgtgtcgcccggaacacatacacgagtacaagctgaccgcg
tacagcttgtacgcggccgtatcggtcgggcttcagacgcacgacatcgtcgagtacttg
aagcgcctcagcaaaacaaccattccggagggtatcgtcgagtttatacggctctgcacg
ctgtcgtacggtaaggtgaagctggtgctcaagcacaacaagtactttgtggaaagtccg
cacccggaagtgctgcagaagctgctgaaagatccggtcattcagtcgtgccggttgcgc
cgtaccgaggaggaaggtggcgacgggttcattaagcaaacgcttgagaagggaaaagct
ataactgcgttcggacagacgaagctaccggccggacaaacggtgttgccaaccggtacg
gccgcggcagaaaccgctgccgacggtgcggaaccggtccccgaggaagccaccgtcccg
gaagacatcaccaacttctacgacaagatggacaacgaggaggaggaggaggaagcgaac
ctgaacaccgtttcgttcgaggtgaaccaggaaaagattgaagtgctgcagaagcgctgc
atcgagatcgagttcccactgctggccgagtacgactttcgcaacgatacgatcaacgcc
gatattaacatcgatcttaagccggcggccgtactgcgtccgtaccaggagaaaagcctt
cgtaaaatgtttggcaatgggcgggcccggtcgggcgtcattgtgttgccgtgcggggcg
ggcaaatcgctggtcggcgtgaccgcttgctgtacggtgcgcaagcgggcgctggtcctg
tgcaacagtggcgtgtcggtcgagcagtggaagcaacagttcaagatgtggtccaccgcg
gacgacagtatgatctgtcgctttacgtccgaggcgaaggataagccgatgggatgcggc
atcctcgtgacgacgtactcgatgataacgcacacccagaagcgttcgtgggaagcggaa
cagacgatgcgctggctgcaggagcaggagtggggcattatggtgctggacgaggtgcac
acgatcccggccaaaatgttccgtcgcgtgctgacgatcgtgcagtcgcactgcaagctc
ggcctgaccgcgacactgctccgcgaggatgacaagatcgcggatctgaatttcctcatc
ggtccaaagctgtacgaagcgaactggctcgagctgcagaagcgtggctacattgcgcgc
gtccagtgcgcggaggtgtggtgcccgatggcgccggaattctaccgcgagtatctgatc
gccaaaacgtcgaaaaagatgctgctgtacgtgatgaatccggccaagtttcgcgcctgc
cagtatttgatccgctaccacgagaagcgtggcgataagacgatcgtcttcagcgacaac
gtgtttgcgctgaagcattacgcgatcaagatgaacaaaccgtacatctacgggccaacg
tcgcagaacgagcggatacagattctgcagaactttaagttcaaccccaaggtgaacaca
atcttcgtgtcgaaggtggccgacactagcttcgatctgccggaggcgaacgtgctgata
cagatctcgtcgcacggtggctctcggcgccaggaagcgcaacgtttggggcgtattttg
cgcgcgaagaagggtgccatcgccgaggagtacaatgcgttcttctatacgctcgtgtcg
caggacacgctggagatgggatactcgcgcaagcggcaacggttcctggtgaaccagggc
tacagctacaaggtgattacgcatctggcgggcatggagagcgatccggatctgttctac
aagacgcgcgaggagcagggccagctgctgcagcaggtgctgtccgccaccgatatggac
tgtgaggatgagcggatgccgggcgatggtacgggtgtgccgagaccgggcggttccaag
cggatgggcgggctcagctcgatggctggggcggacgatgcgatctactacgaggcgcgc
aagaagtcggcccaccagcatccgctgtttaagaagttccgatgctag
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