Anopheles stephensi (Asian malaria mosquito): 118507161
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Entry
118507161 CDS
T08252
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118507161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aste03019
]
118507161
03041 Spliceosome [BR:
aste03041
]
118507161
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118507161
Spliceosome [BR:
aste03041
]
Complex B
Other components
Prp19-related factors
118507161
Complex C
118507161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_8
TPR_10
Mad3_BUB1_I
ARM_TT21_C
PPR
NRDE-2
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
118507161
NCBI-ProteinID:
XP_035901108
UniProt:
A0A182Y1K4
LinkDB
All DBs
Position
2:777356..787067
Genome browser
AA seq
868 aa
AA seq
DB search
MPIASEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDSEYEEVNNAFERALVFMHKMPRIWMDYCSFMTGQ
CKITRTRQVFDRALRALPITQHHRIWPLYLEFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMELLERNPNPTEDHEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVSEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLADARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRQKQYDEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLNRYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTTGEPPKDAMRALEVKAAETTARAIAAVGASG
GNIMFVRGETQGGAAKDDRVVNPDEIDIDDEDEDEEDDEDENGTEGNGGAGGVDISKKIP
IERQTIPAKVFGSLHREVEEKESNEMDE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcatcggaagttaaccttgcggaagttttcttcaacgaagaggacctcccg
tacgaagaggaaatccttcgcaatgcttactccgtgaagcactggatgcgctatgtcgag
cacaagcggaacgcaccacgattcgtcatcaacaccgtgtttgaacgagcgttgaaggag
cttcccggttcctataagctgtggtacaactacctgaaaacgctccggaagcaggtgaag
ggcaaatgcatcacggacagtgagtacgaggaggtgaacaatgcgtttgaacgtgcgctc
gtgttcatgcacaagatgccccggatctggatggattactgctcgtttatgacgggccag
tgcaagataacgcgtacccgccaagtattcgaccgagccctacgggcactcccaattacg
caacatcatcggatttggccactgtatctggagtttctgaagcgcttcgatattcccgaa
acggcggtccgagtgtggcgccgttacttgaagctctgccctgaggatgcggaagagtat
gtggagtttctgcaatcgatcggccacctagacgaagcagcacaacagcttgccagcata
gtggacaatgaaaacttcgtatcgaagcacggcaaatcgaatcaccagctgtggaacgag
ctttgtgagttgatttccaaaaatccggacaaagtgcactcgctcaacgtggacgggatt
atccggggtggactgcgacggtacaccgatcagttgggccatttgtggaattcgctcgct
gggtattatgtgcgcagtgggctgtttgatcgggcgcgggatatctacgaggaagccatc
caaacggtcactactgttcgtgatttcagccaagttttcgatgcgtatgcacagtttgag
gaattaagtctaagtaaagtgatggagctgctcgaacgcaacccaaatcccaccgaggat
catgagattgacgtggagctgcgaatggctcggttcgagtacctaatggaacgccggctg
ttgctgctgaacagtgtgcttttacgtcagaatccacataacgtttccgagtggcacaaa
cgggtcgagctgtacgaaggcaaaccgcacgaaatcatcaacacctacactgaagcggta
catacagtacaaccgaagctggccgtcggaaagctctacacgctgtgggtggcttttgca
aagttttacgaaacgaacaagcagctggcggatgctcggatcgtgttcgaaaaagcggtt
caggttgactatctgaaggtggacgagctggccagcgtttggtgcgagtgggccgagatg
gagattcggcagaagcagtacgacgaagcactacgcatcatgcagcgagccacagcaatg
ccgaagcgaaaggttgcctaccacgatgacacggagacggtgcagatgcgcgtgtacaaa
tcgctcaagctgtggtcgatgtacgcggatctggaggaaagcttcggtacgttcaagact
tgcaagcaggtgtacgatcgtatcatcgatttgaagatctgcacgccgcaaatcatcatc
aactatgggatgtttctggaggagcacaattacttcgaggaagctttcaaggcgtacgag
aagggaattgctttgttcaaatggccgaacgtgtacgacatctggaacacgtacctaacc
aagttcctgaaccggtatggtggtcagaagctagagcgagcccgtgacctgttcgagcag
tgcctggatggatgtccgccggagctggcgaaaaatctgtacctgctgtacgccaaactg
gaagagcagcacggtctggcacggcatgcaatggcggtgtacgagcgagcaaccaccgcc
gtcaaagaggaagaaatgtatgccatgttcaatctttacattaagaaggcggccgaaatc
tacggcattccacgcacgcgccaaatttacgagaaagcgatcgaagtgctgccggaagcg
gactcacgcaaaatgtgcgtcctgtttgccgaaatggaaacgaagctgggcgaaatcgat
cgcgctcgggccatctacgcacactgcagtcaaatgtgcgatccgcgcgtaacagccgac
ttctggcagacgtggaaagaattcgaaatccggcacggcaatgaggacacgatgagggag
atgctgcgtatcaagcgatcgatccaggcgacctacaacacgcagatcaacatgatgtcg
gcggcactgatcaacgctgccgtcacgaccggcgaaccgccgaaggatgctatgcgggcg
ttggaggtgaaggcagccgaaacaacggcacgtgcgatagcggccgttggtgcatctggc
ggcaacattatgttcgtgcgcggtgaaacgcaaggaggagctgcaaaggacgatcgcgtg
gttaatccggatgaaatcgacatcgacgatgaggatgaggatgaggaagacgacgaggac
gaaaacggcacggaaggcaatggcggggccggcggggttgatatcagcaaaaagattccc
atcgaacgtcagaccattccagcgaaagtgttcggtagtcttcatcgggaagttgaagag
aaagaatcgaacgaaatggacgagtaa
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