Anopheles stephensi (Asian malaria mosquito): 118508289
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Entry
118508289 CDS
T08252
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118508289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aste03019
]
118508289
Enzymes [BR:
aste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118508289
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118508289
mRNA degradation factors
3'-5' decay
Ski complex
118508289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
ResIII
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
Ski2_beta-barrel
ATPase_2
KOW
nSTAND3
LIF1_N
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
118508289
NCBI-ProteinID:
XP_035903826
LinkDB
All DBs
Position
2:48077175..48081861
Genome browser
AA seq
1216 aa
AA seq
DB search
MSFDPAWLSEPPPIIEDTEDLLRAFILEPKIPIHEPKPYFEPRHPSIDQLYDVPHAPIIT
RIVPDRCPETGKVLDFVETLVQNAGSTAKNSMSLQREPTESLDSARGSASYFPFWPGGFD
EPETMLADLVPSPMFEPGALKSCPPGFATGVEFEASGSVAERSEGIGDGGVIDLLSAIAH
EDGFDLLSDATTQREKNATPHEERKLPADIDEESLLSVESKQTADGQVLQISSVSNNATQ
SAEWAEMIDISKPVDDFYVKIPAMAHRFPFELDIFQKQAILKLEEHNHVFVAAHTSAGKT
VVAEYAIALSKKHMTKTIYTSPIKALSNQKYRDFKTTFQDVGLITGDIQIDPTASCLIMT
TEILRSMLYCGSDITRDLEYVIFDEVHYITDSDRGHVWEEVLILLPDHVCIVMLSATVPN
TIEFANWVGKTKKKRVWVVSTAKRPVPLEHYLYTGFGGKSKDDSFLIVNEHSQFLAQGYH
RAKESCEARQAKNATRRTGGPYSQRQEQTLWVGLIDHLQKKEKLPVVAFTLSRNRCDNNA
EALMSCDLTTAREKYAITSFFQQCLQRLIPPDRALPQVVQMQACLERGIGIHHSGILPIL
KEIVEMLFARGLVKILFATETFAMGVNMPARTVIFDSTRKFDGQAVRPLQPSEYTQMAGR
AGRRGLDKTGTVIILCKQHLPTDGELKTMILGKPIRLESQFRLTYAMMLYLLRVELVSVE
NMMLHSFREFGKRQQMPQSKLELSKMQEKMSSLTKLSDNLKPLCEFYEAAHEYIDLWREL
MPKQLCQPKAINELKVGRVVVVTDGHHYNKLGVLLSVSLQSHKDMKLVVLVLDHGQTQPK
PDPPHPEPLDRGTLWHQMLSLAYPYQTFLPEGVGGHCVLTLGPANLIEVTKHTIKCDASN
IIRSWENRLIPRFRDAPPSQATVEAVASLAELNAKVIEAGSVTGTLECVRFQRDLTNLEL
SEQLKIAQDRLSRWVPYTNIADFEHEFALVFDWKQLERKLDELKYQASYESMSLYPDYQR
KLQVLQELKYIDEMQQVAMKGRVACEMGQNELMITELVMRNILTDLQPAEIAALLSSLVF
QAKTDVQPKLTETLQKAEAQFREVENDIRLVERQYGVTDVCKKEELNFGLTEVVYEWARN
KPFAEIMVLTDIKEGIIVRCIQQLNETLCNVKDAARIIGDPVLHSKMEEASNAIKRDIVF
AASLYTSSTPIVIGEV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgatccggcctggctgtcggaacctccccccatcatcgaggacacggaagat
ctgctgcgtgcgttcattctcgaaccgaaaatcccgatacacgagccgaaaccgtacttt
gaaccacgtcacccatccatcgaccaattgtacgatgtgccgcacgcacccatcattacg
cgcatcgtgcccgaccggtgtccggaaaccggaaaggtgttggatttcgtcgaaacgctg
gtccagaatgcgggatcgacggccaaaaattccatgtcattacagcgcgaaccgaccgaa
tcgctggattcggcccgcggctctgcctcgtactttcccttctggcccggcggattcgat
gaaccggaaacgatgctcgcggacttggtgccgagcccgatgtttgaacctggcgctctg
aaatcgtgtccaccggggtttgcaaccggtgtagagtttgaagcgagtggcagcgtggca
gaacggagcgaaggtatcggtgacggaggggtgatcgatctgctgtcagcgatcgcgcac
gaggatggtttcgatctgctgtcggacgcgacgacacaacgcgaaaagaatgcaacaccg
cacgaggaacgcaagcttccggccgatatcgatgaggaaagtttgctgagcgtcgaaagc
aagcaaacagccgacgggcaggtgctgcaaatttccagcgttagcaacaacgcaacccag
tcggccgaatgggccgaaatgatcgacatttccaaaccggtggatgatttttacgtcaaa
atcccggcgatggcgcacaggtttccgttcgagctggacatcttccagaagcaggcgatc
ctaaagctggaggagcacaatcacgtgtttgtggcggcacacacgtccgcgggtaaaacg
gtggtggccgagtacgcgatagcactgtccaagaagcacatgacgaaaacgatctacacg
tcacccattaaggcactctccaatcagaagtaccgcgactttaagaccaccttccaggac
gtggggctgataaccggggacatacagatcgatccgaccgcgtcctgtctcatcatgacg
acggaaattctgcgctcgatgctgtactgtggcagcgatattacgcgcgacctcgagtac
gtcatcttcgacgaggtgcactacatcaccgactcagaccgggggcacgtgtgggaggag
gtgctcatcctgctgcccgaccacgtgtgcatcgtgatgctgagcgccaccgtaccgaac
acgatagagtttgcgaactgggtgggcaaaacgaagaagaagcgcgtgtgggtcgtaagc
accgccaagcgaccggttccactcgagcactacctgtacacgggattcggtggcaaatcg
aaggacgattcgttcctgatcgtgaacgagcacagccagttcctggcgcagggttaccac
cgggcaaaggaaagctgtgaagcgaggcaggcgaaaaacgcaacccgccgaacgggcggc
ccttatagccagcgccaggagcaaacgctctgggtcggtttgatcgatcatctgcaaaag
aaggagaagctgccggtggtggcgttcacgctgtcccgcaaccggtgcgacaacaatgcg
gaagcgctcatgtcctgcgatctgacgacggcacgggaaaagtacgccatcacctccttc
ttccagcagtgcctgcagcggctcatcccgcccgaccgtgcactgccgcaggtggtgcag
atgcaggcctgtctcgagcgcggcatcggcattcaccacagcggcatcctgcccatcctg
aaggagatcgttgagatgctgtttgcgcgcgggctcgtaaagattctgtttgccacggaa
acgttcgcgatgggcgtgaacatgcccgcccggacggttatcttcgacagtacgcgcaag
ttcgacgggcaggcggtccgtccactgcaaccgtccgaatacacccagatggcgggtcgg
gctggacggcgcgggctcgacaagaccggtacggtcattatcctctgcaagcagcatctg
cccaccgacggggagctgaaaacgatgatactgggcaaaccgatacggctcgaatcccag
ttccggctgacgtacgcgatgatgctgtacctgttgcgcgtcgagctggtgtcggtggag
aacatgatgctgcacagctttcgggagtttggaaagcggcagcagatgccccagagcaag
ctggagctgagcaagatgcaggagaagatgtcctcgctcaccaagctcagcgacaatctg
aaacctttatgcgagttttacgaagcagcgcacgagtacattgacctttggcgcgagctc
atgcccaagcaactgtgccaaccgaaagcaatcaacgagctgaaggtagggcgcgtggtg
gtagtgacggacggccatcactacaacaagctcggagtgttgctctccgtatcgctacaa
tcccacaaggacatgaagctggtcgtgctggtgctagaccacggacagacccagccaaag
ccggacccgccccacccggaaccgctcgaccggggaacgctctggcaccagatgctctcg
ctagcgtacccgtaccaaacgttcctgcccgaaggggtcggtggacactgtgtgcttacc
ctcggcccagcgaacctgatcgaggtgaccaagcacacgatcaagtgcgatgcaagcaac
atcatccgcagctgggaaaaccgtctcattccacgattccgcgatgcaccaccgtcgcaa
gccaccgtcgaagcggtcgcaagtttggccgaactgaatgcgaaggtaatcgaagccggt
tccgtgaccggtacgctcgagtgtgtgcgattccagcgtgatcttacgaacctggagctg
tcggagcagctgaagatcgcccaggaccggttgagtcgctgggtgccgtacacaaacatt
gccgactttgagcatgagtttgcgctcgtgtttgattggaagcagctggagcgaaagttg
gacgagctgaagtatcaggcgtcgtacgagagtatgtccctgtatccggactaccagcga
aagctgcaggtgctccaggagctgaagtacatcgacgagatgcagcaagtggccatgaag
ggacgagttgcgtgcgagatgggccagaacgagctgatgattacggagctggtgatgcgt
aacatactgaccgatctgcagccggccgaaattgctgccctgctgtcgagcttggtgttt
caagcaaaaacggacgtacagccaaagctgactgaaacactacagaaggccgaagcacag
ttccgcgaggttgagaacgacatccggctggtcgagcggcagtacggtgtgacggatgtg
tgcaaaaaggaggagctcaactttggcctcaccgaggtggtgtacgagtgggcccgcaac
aaaccgttcgccgagataatggtgctgacggacattaaggaaggcatcatcgtgcgctgc
atccagcagctaaacgaaacgctgtgcaacgtgaaggacgcggcccggatcattggcgac
ccggtgctgcacagcaagatggaggaagcgtcgaatgcgatcaagcgcgacatcgtgttt
gcggccagtttgtacacctcgagcacaccgatcgtcatcggggaggtgtaa
DBGET
integrated database retrieval system
