Anopheles stephensi (Asian malaria mosquito): 118508527
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Entry
118508527 CDS
T08252
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118508527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aste03021
]
118508527
03036 Chromosome and associated proteins [BR:
aste03036
]
118508527
Transcription machinery [BR:
aste03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118508527
Chromosome and associated proteins [BR:
aste03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118508527
PBAF complex
118508527
GBAF(ncBAF) complex
118508527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118508527
NCBI-ProteinID:
XP_035904293
LinkDB
All DBs
Position
2:complement(78713688..78719954)
Genome browser
AA seq
1393 aa
AA seq
DB search
MEMVSLGPKKDGNPNAEFFTAPETLQGFETVRLWLQKHFKKFLAPDPPTKESLAHLIIQF
IQYQEAKLGKNSQDPPTTRLPIRCFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKN
PMRKDPIGQMVLDIETALIEAECMRLPIVYIRPEVDRATANKITDIVTNHQGEITADEEE
ATHIIYPVIDPLPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNSFDLPENVPESPPSPA
ERWRVSASWVIDLDEYNEWMSEEDYEVDEVGRKKVHPHRLGVEDLMSSVGGGGGGSSEDK
VKKTPKVVNSKRKRSPSPAAGKGGKRKSYRSPAASAAASSFQKKPRADDEESEDLTKDMD
DPTPETNITEVKPNMGSSASGPATPQPKRDPDMMPMKYATVTDLDDEMERGVGASGAGGS
GSGSGGGSGGSGPGVGGDDSQAGKTSDSSNTQDFPVGGKDDLEDNVTEQTHHIIVPSYSA
WFDYNSIHVVEKRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLA
GDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTAQ
PSAAKNLLDLDKKNAGLGEKKDELVPGAGGPLGANGGTPGSLLGPDGIKVEQGAIPTADP
NGQFGLRLDQYAKKPAAMRNKTAASMTREWTEQETLLLLEGLEMYKDDWNKVCEHVGSRT
QDECILHFLRLPIEDPYLEDDSTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAAS
AAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPNAGLANSGIAGTGPDKDKEDE
AESKSASAAASGSSTAAASGAAAPSSTPATPSTTDVEMKDVSKKDDADKEKSSDETTTKS
PDSDVTATADASKATTDGAPGAATTTPSADKEKEGGTVAAVGPSTTATGGTPESGSTTAA
AAAAAASSTAAKENGSTDPKLFNEGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALL
VETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAH
QRFQLEQGQWQQQQAQAQAQAQAQAQQQQQQQQQQQQHGTAGAPGQLPTTGAAPPHHASQ
QPAGSQTMPGGQHHHLAANPGANTPKPPSIVGGPGMVPGAPGAVHAPSNHPPSVAAAAAA
AASSSTLPATASLPSVSQGPVHAPSATPSAAAAAAAVSPACSNGIPPITSTPSSTQPPST
NPTDGITPSSIMPTAPSPADPTAAVPTATAPGTAAVPMVPPPPSGGPQPPPSEQHHAPPP
PTGSIESPPATVDATGAAAAVTNQPSPSSESLGEPGQATAAEPAASGPAGPSEGQQSGAA
APGEGPAAVAPPS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgtcgctggggccgaaaaaggatggaaatcctaatgcggagttttttacc
gcaccggaaacactgcaagggttcgaaacggtgcggctgtggttgcagaaacacttcaaa
aagtttcttgcacccgatccaccaacgaaagaatctttggcacatctgatcattcagttc
atacagtatcaggaagcgaagcttggtaaaaactcccaagatccaccaacgacgcgactg
ccgatacgatgctttatggatttcaaaccgggcggtgcgctgtgccacattctgtccacc
atgtaccgctacaaggcggaacagcgctggcgaaagtttgacttcaccgtcaacaagaac
ccgatgcgcaaggatccgatcgggcagatggtgctggacattgagacggcgctgatcgaa
gcggagtgtatgcggctcccgatcgtgtacattcggccggaggtggaccgtgccacggct
aacaaaatcaccgacatcgtcacaaaccatcagggcgagatcacggccgatgaggaggag
gcgacgcacatcatctatcccgtcatcgatccgctgccggaagattacgcccggcctacg
ttccggcgcgataagcacgtcatgatccattggtactacttcccggagtcatacgacaca
tgggtaccgaactcgttcgatctgcccgaaaacgtacccgagagcccaccgtccccggcc
gaacgttggcgcgtgtccgcctcctgggtgatcgatctggacgagtacaacgagtggatg
tcggaggaagactacgaggtggacgaggtgggccggaagaaggtgcatccgcaccggctc
ggcgtggaagatctgatgtcgagcgttggcggtggcggcggcggcagttcggaagataag
gtgaagaaaacgcccaaagtggtcaactcgaagcgcaaacggtcgccctcgcccgccgcg
ggtaaagggggcaagcggaagagctaccgttcgccggcagcgtccgcggctgcatcgtcc
ttccagaaaaaaccgcgcgccgacgacgaagagtcggaagaccttacgaaagacatggac
gatccgacgccggagacgaacatcaccgaggtgaagccgaacatgggcagctccgcgtcg
ggtccggcaacaccgcagccgaagcgtgatcccgacatgatgcccatgaagtacgccacc
gtgacggatctggacgatgagatggagcgcggcgtaggtgcgtccggagccggtggcagt
ggttcgggctcaggtggcggtagcggaggttcggggcccggtgtcggcggggacgacagt
caggcgggaaagacgagcgacagcagcaacacgcaggacttcccggtcggcgggaaggac
gatctggaggacaatgtgacggagcaaacgcaccacatcatcgtgccgtcgtactcggcc
tggttcgattacaactcgatacacgtggtggagaaacgcgcgctgcccgagttctttaac
ggcaagaacaaatcgaagacgccggaaatctacatggcctaccggaacttcatgatcgac
acgtaccggttgaacccgaccgagtatctcaccagcacggcctgccgtcgcaatttggcc
ggcgacgtgtgtgcgatcatgcgcgtgcacgcgttcctggagcagtggggactgatcaac
taccagatcgatgcggactcgcgaccaacgcccatgggcccaccgcccacctcacacttc
cacgtgctgagcgacacaccgtccgggctgcagccgatcaatccgcccaaaacggcccaa
ccatcggcggctaagaatttgctcgacctggacaaaaagaatgccgggctgggggagaaa
aaggatgagctcgtccccggcgctggtggcccgttgggtgcgaatggtggcacgcccggc
agtttgctcggtcccgacggcattaaggtggagcagggtgcgattcccacggccgacccg
aacggacagttcgggttgcggttggaccagtacgcgaagaaaccagcggccatgcgcaac
aagacggcggccagcatgacgcgtgagtggaccgagcaggaaacgctgctgctgctggaa
gggctcgaaatgtacaaggacgactggaacaaggtgtgcgagcacgtcgggtcgcggacg
caggacgaatgcatcctgcacttcctgcggctcccgatcgaggacccgtacctggaggat
gacagcacgttcctcggtccgctgtcgtaccagccgatcccgttcagcaaggcgggcaac
ccgatcatgtcgaccgtcgcgtttctggcgtcggtggtcgatcctcgcattgcggccagc
gctgccaaggcggcgatggaggagtttgccgcaatcaaggatgaagtgccggcttccatg
atggacgcgcatctgaaaaatgtggaaaaatcgagctttggcggaaagtttgatccgaac
gctgggttggccaacagtggcatcgccggtaccggccccgacaaggacaaggaagatgag
gcggagagcaaatcggcgtcagcggccgctagtggcagcagtacggcagcagcttctggt
gctgctgcgccatcgtccacaccagccacgcccagcacaacggatgtggagatgaaggat
gtgtcgaagaaggatgatgccgataaggaaaaatcttccgatgaaactaccactaaatcg
cctgattccgatgtcacagcgacggcggacgccagcaaagcaacgacggatggcgcaccc
ggtgcagcgactaccactccctcggcggacaaggagaaggagggtggcactgtggcagcc
gtcggaccgtccaccacggcaaccggcggcacgcccgagagcggatcgaccacagcagca
gcagcagcagcagcagcgtcgtccaccgctgccaaagagaacggttccaccgatccgaag
ctgttcaacgaaggaaacctgcaggcggcggctgccgctgcactggccgcggccgccgtc
aaggcgaagcatctggccgcggtcgaggagcgcaagatcaagagtctggtggcgctgctc
gtcgagacgcagatgaagaagctggaaatcaagctgcgccacttcgaggagctcgagacg
accatggagcgggagcgcgagggtctcgagtaccagcgccagcagctgatacaggagcgt
cagcagttccatctggagcagctgaaggcggccgaattccgggcccgtcagcaagcccac
cagcggttccagctggagcagggccaatggcagcaacagcaggcccaagcgcaggcacaa
gcccaagcccaggcgcaacagcagcagcagcagcagcagcagcaacaacaacatggcacg
gctggagctccgggccagttgccgacgacaggagcagcaccaccgcaccacgcttcacag
caaccggccggttcacagacaatgccgggcggccagcatcatcatctcgccgccaatccg
ggagctaacacgccaaagccgccatctatcgttggtggcccagggatggtaccgggagcg
cctggagcagttcatgcccccagcaaccatccaccgtcggtcgcagcagcagcagcagca
gcagcatcttcgtcgaccctgccggcgacagcatccttaccatcggtcagccaaggaccg
gttcacgcaccatcggccacgccctcggcagcagcagcagcggcagcagtgtcgccagcg
tgctccaacggtatcccccctattacctccacccccagctcaacccaaccgccctctacg
aatcctaccgacggtattacgccaagtagcatcatgccaacggccccttcaccggccgac
ccgacagcggcagtcccgaccgcgaccgctcccggaaccgccgccgtcccgatggtgccg
ccgcccccgtctggcggaccgcaaccacctccgtcggaacagcatcacgcaccaccacct
ccgaccggctcgatcgaatcgcccccggcaacggtagacgcaacgggggcggcagcagca
gtgacgaaccaaccgtcgccatcctccgagtccctcggcgagccgggccaggcgacagca
gcggaaccagcagcgtcgggcccggccggaccgagtgaaggacagcagtcgggggcagca
gcacccggtgaagggccggcggccgtcgctccaccatcataa
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integrated database retrieval system
