Anopheles stephensi (Asian malaria mosquito): 118509818
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Entry
118509818 CDS
T08252
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aste04147
]
118509818
00535 Proteoglycans [BR:
aste00535
]
118509818
00536 Glycosaminoglycan binding proteins [BR:
aste00536
]
118509818
Exosome [BR:
aste04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118509818
Proteoglycans [BR:
aste00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
118509818
Glycosaminoglycan binding proteins [BR:
aste00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118509818
BRITE hierarchy
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
118509818
NCBI-ProteinID:
XP_035906863
LinkDB
All DBs
Position
3:15676985..15866710
Genome browser
AA seq
1161 aa
AA seq
DB search
MKWLYGTVVTLICIAHRVTSSELNIFGGQGIRDALAERDLMGAIQIPLQNGVKFVDGLDG
FPAFGVTSEADLKSPFKLILSDHLQDFAIIATVRPQSSSGGWVFSVVNSLDTVVQLGLLL
EPTATGDQWNATLYYTDAKKERHSQPLASFQVPYGKSWMKMIFKVLPDQVVFYYNCLEAG
VAAVKKEPRKLVFDSASTVYIGQAGPILKRKFEGTFLFLKIYGYPEIVKTHCNRTSLPID
DEFGSADEFGDDFNSEMVYDQSGDDDGFNEPPMISPPPPEYGYRMKGDKGERGAKGESIR
GPPGPPGPQGPPGPPGPPGAAGPKGGGYFDGDGSGDELKRFSQLYDTLPNRKHGGQCFCN
ASLIIEELKMDSKLREYLRGPQGMPGKEGKTGSPGLTGVTGPQGERGTSGPKGDKGDRGD
QGAAGPEGLQGSKGEPGLDGAPGVPGPAGPPGPPGLPENYDTNWNPSRMFKESMLGAPIQ
GMRGGSPGLKGEPGEKGEIGFPGEKGEHGTKGDRGDPGLTGAKGERGHQGAHGQPGPKGP
AGTPGIPGLPGQTGASGPKGDKGNTGESGPPGPPGPPGIVIHSEGARNGTQDQCQCQAGP
PGPPGLRGPPGYDGAPGLTGETGLPGHPGLPGDKGERGLPGPKGEKGPEFIINENAAFNS
SRANKGEKGERGQRGRRGKTGAPGPIGPPGKPGGMGETWPGRPGPKGDQGPKGEKGDSMA
LRGPKGDKGERGMNGRDGLPGPPGLPAASGDGGVQYIPMPGPPGPPGQPGPPGPPGLSIV
GEKGEPGMDSRSPFYSDSQHGFYGRTGGRSSLDELKALRELKHHKDYEDSTLGPPGPPGP
PGPAGRPLHDSDEISNSYGANVRIVPGAVTFQNAETMSKMSSTTPVGTLAYIIDEEALLV
RVNKGWQYIALGTLVPIATVPPPTTTIVPPQRADLQASNLIHNLPQPGDGSVFTATPEYE
SLRMAALNEPYPGDMQGIRGADFACYRQARRAGLLGTFRAFLSSRIQNLDSIVRIADREL
PVVNTRGDVLFNTWNGIFNGQGGFFSQAPRIYSFSGKNVLTDMGWPQKLVWHGSSAHGER
AIDTYCDAWHSPSPDKVGLASSLLGNKLLDQERYSCDNRFVVLCVEAVPQDRRRKRRDTS
SQHEFANEKEYSQYLQGISAL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctatacggaacggtcgtgacgttgatttgcatcgcacacagagtgacctca
tcggagctgaacatatttggcggtcagggcatcagagatgcactcgccgaacgcgatctg
atgggagcgatacagataccgctacagaacggggtcaagttcgtcgatggactggacggg
tttccggcgtttggcgtcaccagcgaggcggacctgaagtcaccgttcaagctgatcctc
tcggaccatctgcaggactttgccattatcgcaaccgtcagaccgcagtccagctccggt
ggttgggtgttctccgtcgtcaactcgctcgacaccgttgtccagctggggctgctgctc
gaaccgaccgctaccggcgaccagtggaacgccaccctctactatacggacgcgaaaaag
gaacggcacagccagccgctcgcatcgttccaggtgccgtacgggaagagctggatgaag
atgatatttaaagtgttgccggatcaggtcgtgttttactacaactgtttggaggcgggc
gttgccgcggtcaagaaggaaccacgtaagttagtgtttgatagcgcctcgacggtgtac
atagggcaggcgggaccgatactgaagcggaagtttgagggaacgtttctgttcctgaag
atctacggctatccggaaatcgtgaaaacgcactgtaaccgaacgtcgctaccaattgac
gatgagttcggttcggctgatgagttcggcgatgactttaattccgagatggtgtatgac
caaagtggtgacgacgatggattcaacgagccaccgatgatttcaccaccaccgcccgag
tatggctaccggatgaagggcgacaagggtgagcggggagcgaagggggagagcatacgg
gggccaccgggaccgccgggaccccagggaccaccgggtccaccgggaccaccgggtgcg
gcaggaccgaagggtggcggctacttcgacggcgatgggtctggtgatgagttgaaacgg
ttctcacagctctacgacacactgccaaacagaaagcacgggggacaatgcttttgcaat
gcgtccctcatcatcgaggagctcaaaatggacagtaaactgcgcgagtatctacgcggc
cctcagggcatgcccggcaaagagggaaagactggttctccgggtctaacgggcgtcact
ggtccgcagggtgaacgtggtacttccggcccgaagggcgacaagggagaccgcggtgac
cagggcgccgccggcccggagggcctccagggaagcaagggggaaccggggctggatggg
gcacccggtgtaccgggcccagccggacctcccggtcctccggggcttccagagaactac
gataccaattggaatccaagccggatgttcaaggaatctatgctcggtgcaccgatccaa
ggaatgcgtggcgggtcaccggggctaaagggtgaaccgggcgaaaagggcgaaatcggc
ttcccgggcgaaaagggcgaacacggtaccaaaggtgaccgcggtgatccgggtctgaca
ggtgccaaaggcgaaaggggccaccaaggagcgcacggacaaccgggaccgaaaggaccg
gccggcacgccgggcattcccggtctgcccggccaaaccggtgcatccggaccgaagggt
gacaagggcaacacgggcgaatcgggcccacccggtccacccggtccgcccggtatcgta
atccattccgagggcgcccgaaacggaacgcaagaccagtgccagtgtcaggcgggacca
cccggaccgccgggattgcgcggtccacccggatacgatggtgcgcccggacttacgggc
gaaaccggacttccgggacatccgggcctgccaggtgacaaaggcgaacggggacttccc
ggaccgaaaggcgagaaagggccggagttcatcatcaacgaaaacgcagcatttaactcc
tcgagggctaacaaaggtgagaaaggtgaacgtggccagcgaggacgccgggggaagacg
ggcgcaccgggaccgataggaccgcccgggaagcccggcggtatgggcgaaacgtggcca
ggccgaccaggaccgaaaggagaccaaggaccgaagggagaaaagggtgacagcatggcg
ttgcgtggacctaaaggcgataaaggtgaacgtggcatgaatgggcgcgatggactgccc
ggaccaccgggacttccagccgcatccggtgacggaggcgtacagtacatcccgatgcca
ggaccgccgggacctccgggacaaccgggtccacccggtccacccggcctgtccatcgtc
ggcgaaaagggtgaaccgggcatggattcgcgcagtcccttctacagtgactcgcagcac
ggattctacggacggacgggaggccggtccagtttggacgagctgaaggcgctacgggag
ctcaaacaccacaaggactacgaagacagcacgctcggaccgcccggaccgccaggacca
ccgggaccggccggacggccgctacacgacagtgacgagatttcgaacagctacggggcc
aacgttcgcatcgtgcccggagccgttaccttccagaatgcagaaacgatgtcaaagatg
tcttccacgactcccgtcggtacgctcgcttacataattgacgaggaagcacttctggtg
cgagtgaacaagggctggcagtacattgcacttggaacgctcgtgccaattgcaacggta
ccgccaccgaccaccaccatcgtaccaccgcagcgtgccgacctgcaggcatcgaatctc
atccacaatctcccgcagccgggcgatggctcagtgttcaccgccacgccggagtatgag
tcgttgcggatggcagcacttaacgaaccgtacccgggcgacatgcagggcatccgtggt
gccgacttcgcgtgctatcgacaagctcgccgtgccggtctcctgggaacgtttagagct
ttcctttcgtcgagaatacaaaatctagactcgatcgtgaggatagcggatcgcgagctg
ccggtcgtgaatacgcgcggtgacgtcctgttcaacacgtggaacggcatatttaacggg
cagggtggtttcttctcccaagcgccccggatatacagcttcagcgggaagaatgtgctc
accgatatgggatggccccagaagctggtgtggcacggttccagtgcgcacggtgagcgt
gcgatagacacgtactgcgatgcctggcactcgccgtccccggacaaggtcgggctggcc
agcagcttactcggcaacaagctgctcgaccaggaacggtactcctgtgataatcggttc
gtggtactctgcgtcgaggcggtcccgcaggaccgaagacggaagcgaagagacaccagc
agccaacacgagtttgccaacgagaaggagtacagccaatatttgcaaggaatcagtgca
ctgtaa
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integrated database retrieval system
