Anopheles stephensi (Asian malaria mosquito): 118510620
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Entry
118510620 CDS
T08252
Name
(RefSeq) collagen alpha-1(XI) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118510620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aste00536
]
118510620
Glycosaminoglycan binding proteins [BR:
aste00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118510620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
118510620
NCBI-ProteinID:
XP_035908540
LinkDB
All DBs
Position
3
Genome browser
AA seq
1891 aa
AA seq
DB search
MQQAHQYGVSFHRPRGRRKRHGMGGGSVGSAWGGVNPTIAVVVAMVVGGVIVYAAAEPRT
DGLVDMIDQFGMPSLPSGISPTTGMCNGTRNQYQPHPEPAYNLNQDTVLSIPTITSFPAG
FPIDFSLLVTLRASPNLERAPLFAVYSSDSDEILMLMVGRDVALYYYDGNPEDDEQDQYQ
NMISFGVSIDDGRWHRLGLSIKGNSVTLILDCSTQITRPLNRRDGVQLVTDGLILTGLQL
NEENGFFTGDLQLFMIANTPDEAYNICTRYAPDCPGGSGSATGSGSSSTVTRTVTIQSTR
TVSNGTAGGGGTVSRTQTSSSSSSSSGGRASSQAAGASIRDQVLRESVSVAGEASAGSSR
GRQAASASSSSGGRDFADLYGDGEGLEVIGDDDDYYNNLEFGGDLSRVAAGAETQPDGSS
RNRTEVEPGAYDQLRPGVLPLPDPEYDASAGGEPRPTGAGGPPTTRPRVNTANRTQTDPA
AGYGPEFEEDEERRVGFPAQSTVTIVGGVKTIRGPRGPPGDPGPKGEPGRDGLNGQSGPS
GPPGHVFMMPLTSAGNEKGPDSQAEALRQMLSQHMTAMRGADGPMGLTGVPGAVGPPGPE
GTKGEPGDVGEPGPIGPRGGVGAKGREGRRGRSGRDGERGATGLQGVKGEQGPIGLPGFP
GEKGERGRQGSVGEKGTQGHDGAQGEDGPPGLPGLPGELGPRGFSGPRGFPGPSGNPGLP
GSEGIPGSKGNPGPQGQPGAPGQTGSPGPVGPPGPQGNLGPPGIPGPHGKPGLPGLPGAD
GPPGRDGNPGIAGPKGDVGPQGVQGPIGFPGNRGPKGDDGERGTAGDKGEKGELGHDGDK
GDMGPPGERGHPGVTGAPGSEGPEGPKGFEGPRGETGMMGLTGDKGKQGVQGFPGYPGPP
GDKGDKGSFGMAGLPGEKGERGNTGLQGERGEVGPRGFRGPRGRRGADGTTGPKGDTGQP
GSPGAQGEIGMQGPEGPRGFIGLPGPQGNHGKDGPPGASGERGPPGENGNPGPIGAPGVV
GPQGPTGEPGPVGEPGIPGLPGLPGEPGVPGDTGKEGQSGPPGPPGKNGPQGGQGLPGFP
GERGMMGMPGLPGLKGELGLPGLPGPIGDKGQPGEPGKEGPPGAEGRPGPPGPPGPSGAK
GERGEQGLGGPVGRDGLPGQRGLAGPPGPVGPPGEDGDKGDMGPPGEKGFKGAQGESGPV
GSPGSQGSRGEPGAIGPPGEKGPPGEIGRTGPKGEDGPTGLPGSPGPAGPQGMPGPTGMK
GGRGDDGPPGSIGPAGPPGEAGRRGPRGAEGGPGAPGSPGPQGIAGEPGTQGPPGPIGPE
GKEGEKGSIGPKGEEGKSGPPGPPGKRGQPGLEGPKGVAGPPGFPGNPGEPGLVGPKGDI
GKDGDDGKQGEAGLPGEPGPPGPAGEIGPPGKIGPEGPAGLQGTTGLAGEKGDRGLPGPP
GNQGLTGPQGMPGPQGPTGLRGSPGPSGEIGPVGKPGDSGAPGKAGEVGAKGPKGDRGRR
GLKGHRGELGLVGLKGDSGEKGDKGVRGVPGPEGTKGEPGPVGPLGLKGNDGPQGPPGND
GPLGPKGTEGVAGLRGEPGPPGPPGPPGPPADAPLIPPELLFRMNEFTMTKGEDRQKREA
GDGTDMDEDLLEVDDFDEEILKVEPRKKTKKKKSKSKPSDLGPKFLDMYSSIYSMRQELD
RIRKPVGTRENPARTCRDLHHGHPQFKDGWYWIDPNLGMGDDAVYVFCNMTAAGETCVFP
DIHSSQMPTIPWRKENDKTDWYSNLRGGFRISYETVGTVQMTFLRLLSQEVYQNFTYACM
NSVAWYSTKDESYDNAIRFLGENEIDIGYENSKIKPTVLVDGCKTGRSKSETVFEVRTPK
LQYLPIIDFYPIDYGLPQQAFGFQVGPVCFK
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcgcatcagtacggcgtgtcctttcatcgtccccgggggcgaaggaagcgc
cacggaatgggtggtggtagcgtgggttcagcgtggggcggtgtgaatccgacgatcgcc
gtcgtcgtggcgatggtcgtcggtggggtgatcgtgtacgcagctgccgaaccgcggacg
gatggactcgttgacatgatcgaccagttcggtatgcctagcttaccgtccggcatctca
ccgaccaccggcatgtgcaatggcacgcgcaaccagtaccaaccccacccggaaccggcc
tacaatctcaaccaagacaccgtgctgagcataccgacgatcacgagctttccggcgggt
tttcctatcgatttttcactgctggtaacgcttcgcgctagcccaaaccttgagcgggca
ccactgtttgccgtctactcgagcgattcggacgagatactgatgctgatggtgggtcgt
gacgtggcgctgtactactacgatggtaatccggaggatgacgagcaggaccagtatcag
aacatgatcagcttcggtgtgagcatcgacgatgggcggtggcaccggttgggactgagc
atcaagggaaactcggtaacgctgatcttggactgtagtacacagatcacgcgtccactg
aacagacgggacggtgtgcagctggtgacggacggtttaatcttgaccggattgcagttg
aacgaggagaatggattctttacgggtgatcttcaactctttatgattgcaaacacaccg
gacgaggcgtacaacatctgcaccaggtatgctcccgactgtccaggtggatctggatct
gctaccggttcgggatcatcctctacggtaactcgcaccgttacgatacagagcacaaga
acggtgtcaaacggtactgcaggaggaggaggcaccgtcagccgaactcaaaccagtagc
agctcgagctctagttccggtggaagagcgtcctcgcaggcagctggcgctagcattcgt
gatcaggtgctgcgtgagtcggtgtccgttgccggtgaagctagcgccggcagttcccgt
ggaagacaggcagcttcggcaagctcgtccagcggtggaagagactttgccgatctgtac
ggtgatggagaaggcttggaggtgattggagacgacgacgattactacaacaatttggag
ttcggtggggatttgagtcgggtagctgctggtgcagaaacgcaaccagatgggagttcg
cgcaaccgtacggaagtagagccaggagcttacgatcaactgcgtcccggagttttgcct
ttgcctgatccggaatacgatgcgtcagccggtggagaaccaagaccgacgggagcagga
ggtcctccaactacgagaccgcgtgtaaatactgcgaaccgcacacaaacggatccggcc
gccggttatggtccagaatttgaagaagatgaggagcgaagagttggattcccggcacaa
tctaccgtaacgatcgttggcggagtgaagaccatacgaggacctcgtggaccaccggga
gatccaggtccgaagggagaacctggtcgtgacgggttgaacggacagtcgggaccttca
ggaccaccgggacacgtgttcatgatgccactcacctctgccggcaatgaaaagggacca
gactcacaggcggaagcattgcggcagatgctctcacagcacatgacagcgatgcgagga
gccgatggaccaatgggactgactggggttcctggtgctgtcggacctccggggcctgag
ggaacgaaaggagaaccgggagatgttggtgaaccgggacccattggacctcggggaggt
gttggcgctaaaggtcgcgagggtcgccgaggaagatcgggacgagatggcgaacgagga
gcgaccggtttgcaaggtgtgaaaggtgaacagggccccattggattgcctggcttcccc
ggagagaaaggagagcgcggacgacaaggatcagtcggtgagaagggtacccagggacat
gatggcgcacagggagaagatggtcctccaggactaccaggacttccgggtgagcttggg
ccgcgaggattctctggaccgcgaggctttcctggcccatcgggcaatccaggtctgccc
ggatctgagggcattcccggttccaagggaaaccctggaccacaaggtcagccgggagcg
ccaggccaaacgggatcgcccggtccggtaggaccaccaggtccgcaaggaaacctcggt
ccgccgggtattcctggtccacacggaaagccaggccttccgggtcttccgggagctgat
gggcctccggggcgggatggaaacccaggcatcgccggaccgaaaggtgatgtaggtccg
caaggtgtacagggccccatcggattccccggcaaccgaggacccaagggagacgacggt
gagcgaggtactgccggcgataagggtgaaaagggtgaactaggacacgatggtgataag
ggcgatatgggaccaccgggcgaacgtggacatccgggtgtaactggtgcgcccggatcg
gaaggacccgaaggaccgaaaggattcgaaggacctcggggagaaacgggcatgatgggg
ttgactggcgataagggcaagcaaggagtgcagggtttcccgggctacccaggaccgccg
ggcgataagggcgacaaaggatcgtttggcatggccggtttgccgggcgaaaagggcgaa
cgtggaaacactggacttcaaggagaacgtggtgaagtcggaccaagaggattccgagga
ccgcgtggtaggcgaggcgcagatggaactaccggaccgaaaggtgataccggccagccg
ggatctcccggagcacagggtgaaataggcatgcagggaccggaaggtcctcggggtttc
atcggacttccagggccacagggaaatcatggcaaagatggaccgccgggagcttctggc
gaacgtggacctccgggtgaaaacggaaatccaggccccattggtgctcccggtgttgtt
ggaccgcaaggaccaacgggcgaaccgggaccagtcggagaaccaggcataccaggactg
ccgggactgcctggagaaccaggcgtaccaggagacaccggtaaagaaggccagtcaggt
ccaccaggaccaccgggaaagaatggtccacaaggtggtcaaggtttgccaggattccca
ggtgaacgtggcatgatgggaatgcccggattgcccggtctcaagggagagcttggattg
cccggacttcctggaccaatcggtgacaaaggtcagccaggcgaaccaggcaaggaagga
ccaccaggagctgagggacgacctggacctcctgggccgcctggcccctccggagcaaag
ggcgaacggggagagcaaggtttaggcggaccagttggacgagacggtttaccgggacag
cgaggtctagctggaccaccaggacctgtgggacctccgggagaggatggcgacaagggc
gacatgggaccgccgggagagaagggtttcaagggcgctcaaggtgaatcaggacctgtg
ggatcgccaggatcacaaggaagtcgtggagaaccgggagctattggaccaccgggcgag
aaaggacctccgggagagattggccgtacagggccgaagggtgaagacgggccaaccggt
ctgcccggttcccccggaccagcaggacctcaaggaatgccaggtccaacgggaatgaaa
ggaggccgtggggacgatggtccaccgggatcaattggacctgctggaccaccaggagaa
gcgggtcgtcgtgggccacgcggagctgaaggtggccccggtgctccaggatctcccggt
ccgcagggaattgcgggagaacctggaacgcaaggaccacccggtccgattggacccgag
ggcaaggaaggcgaaaagggttccataggaccaaagggcgaggaaggaaagtcgggacca
cctgggccaccgggaaaacgagggcagccgggcttggaaggaccaaagggagttgctggt
ccaccaggattccctggcaatcctggtgagcctggactcgtcggaccgaagggggatatt
ggcaaggatggagacgatggaaaacagggtgaagctggcctccccggtgaaccaggtcca
ccgggaccggcgggtgagattggaccgccgggtaaaatcggaccagaaggaccggccggt
ctgcaaggaacgacgggattggctggcgaaaagggagaccggggattaccaggaccacca
ggaaatcaaggactcaccggaccgcaaggaatgccgggtccacagggacctactggactg
cgaggatctccgggaccttcgggcgaaattggtcccgtcggtaaaccgggcgatagtgga
gcacctggaaaagcgggagaggtaggtgccaagggtccgaaaggtgaccggggccgtcgt
gggctaaaaggacatcgaggtgagcttggtctggtcgggttgaagggtgactccggtgag
aagggtgacaaaggcgtccgaggagtcccaggccccgaagggaccaaaggagaacctggt
ccagtaggaccgctaggactcaagggtaacgatggtccgcaaggacctcctggaaacgat
ggcccgctaggaccgaaaggcacagagggtgttgctggtcttcgaggagagcctggaccg
cccggacctcctggaccacctggacctccagccgacgcaccgcttatcccaccggagctg
ctcttccgcatgaacgagttcaccatgacgaagggtgaggatcgacagaagcgtgaagcg
ggtgatggtacggacatggacgaagacctgctcgaggtggatgactttgatgaggagatc
ctgaaggtggaacctcgcaagaaaaccaagaagaagaaatccaagtcgaaaccgtccgat
cttggcccgaagttcctggatatgtacagctcgatctactcgatgcggcaggagctcgat
cggatacggaagccggttggtacgcgggaaaatcctgctcgaacgtgtcgggatttgcac
catggacatccacagttcaaggatggctggtactggatcgatcctaaccttggcatgggc
gatgacgcggtttacgtgttctgcaacatgacagctgctggcgagacgtgcgttttcccg
gacatccacagttcccagatgccaacgattccatggcgcaaggagaacgataaaacggat
tggtactcgaatctgcgcggtggtttcaggatatcctacgaaacagtcggtacggtccag
atgaccttcctgcgccttctatcgcaagaggtgtaccagaacttcacgtacgcctgcatg
aacagtgtcgcctggtacagtacgaaggacgaaagctacgacaacgcgatacgcttcctg
ggcgagaatgagatcgacatcgggtacgagaactccaagattaaaccgaccgtcctggtg
gacggatgcaaaacgggacgtagcaagagcgagacggtgtttgaagtgaggacacccaaa
cttcaatacctccccataatcgacttctatccgatcgattacggactgccacagcaagcg
ttcggttttcaggtgggcccagtttgcttcaagtaa
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