Anopheles stephensi (Asian malaria mosquito): 118511629
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Entry
118511629 CDS
T08252
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118511629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aste03019
]
118511629
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118511629
mRNA degradation factors
5'-3' decay
Decapping complex
118511629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
118511629
NCBI-ProteinID:
XP_035910833
LinkDB
All DBs
Position
3
Genome browser
AA seq
975 aa
AA seq
DB search
MDTFFGFNTKLPVELDDGEEDEEFARKFYSQTTTRRTGLRSPLHRRCTEDISDEEEYDAL
NDETFGAAVKGDWEDIHETLVRLERGRSASIPGDDDDDASSGDLLFDDYDFDLQLSKLTQ
CDDTNDESGRSSAVAQSIGDEFASKLRLDPSIWGTPFQEAPPPPLASSPQQPQYYDRKSS
VTPFAQSNAFYHATGEQNAARPTEVFPAMKIRSLEDIERNIIHNQHQQNQHQQSFHLLQK
QMAQQQQQQQLQQQRLMQPFLQSTAPAHGHQQPVVKPREHIIPTKEAKTIPSLPMHSSLG
VGPALMTPPPHLLAARNCALFPSGPPPQPPQPPVPPLLNHSNRLPLGLLPYNILTARPYS
APINNLAMHPAFPPHGPYGSPLQGFLHPPPPVKIGQPLPQRHPGLPGPPFLLQHNPTPHP
NNQFNQRLMQEIQQNHPILAFNRQLLNSFNACGNGMKMHVPQNLPRPALGTQLQYPPQQQ
QRSRQAAGTGIPPGAGPERERDEYANMMSNRDKQWLIGIQLSQLNSDVPYWNDYYFTVFK
QRLAEAKADVEENHIYVENKQSHPFSNTPTKKEHAHLLLLSMLTRNVKVAGMMNRERRSS
ESRPAAGGNDGKDGSTARPYTPFQFEKSLGKLQCGSVTAPRKLIDADVMGGDQLNGNGGI
TAAEQSLTQRKARHVLLLIETLYNLLLKLEDKLNPIAIATAKVLREKQLRDHANMVGTAY
SNGGCPGKLENFKANGVTNGCNNGLEPEESFDELCECLLGQLSQEKVTSILGVRKGRNLL
RRTLGVLHNRPSRWTLWNMIFTALPCLAKKDRDDADCLVLALYGEFERQLRHGTVEDLLL
VATSISSSRKVMQCIVGSKFLLSCIITIIFQMEMFCGKHPASLLTVSQANHQWVTFLLDV
NQVVKESAAGPRAGGSISINPDDNILRTLRVHFARFGTRVDGTDLLNFIIDYGNGQQKNR
TGRKQSLQETKIRTK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtttttcggatttaatacaaagctgccggtggagctcgatgacggcgaggag
gacgaggagtttgcccgcaaattctattcgcagacgacaacacgcagaaccggattgcgc
tccccgttgcaccggcgatgcaccgaagacatttcggacgaggaggaatatgacgccttg
aatgacgaaacgttcggtgcagcggtcaaaggcgactgggaggacattcacgaaactctg
gtccggctggaacgtggcagaagtgcttccatccccggggacgatgatgatgatgcgagc
agtggagatttgctgttcgacgattacgattttgatctgcaactttcgaagctaacgcag
tgcgacgataccaacgatgagagcggacggagcagtgcggttgcacagagcattggtgat
gagtttgcgagcaagttacggttggatccaagtatctggggaactccgtttcaggaagca
ccaccaccaccattagcatcatcaccacagcaaccgcaatactacgatcgcaaatcaagc
gtcacaccgttcgcccaatcgaatgcgttttatcatgctacgggtgaacagaatgctgca
cggcctaccgaggtgtttcccgcaatgaaaatacgttcgctggaggacatcgaacgaaac
atcatccacaatcagcaccagcaaaaccagcatcagcaatcgtttcacctgctgcaaaaa
caaatggcacagcaacaacaacaacaacaactgcaacaacagcgactgatgcaaccgttt
cttcaatcaacagcacctgctcatgggcatcagcaaccggtggtgaagcctcgcgagcat
attataccgaccaaggaggccaagactattccatcgttgcccatgcactcatcgctagga
gttgggcccgcattgatgacgccaccaccgcatctattggcagcgcgaaactgtgccctg
ttcccttctggaccgccaccgcaaccaccacaaccacctgtaccaccattgttgaatcat
tcgaatcgtcttccgctcggtctactgccgtacaacatactaaccgctcgtccgtactcg
gcaccgatcaacaacctcgcgatgcatcccgcttttccaccgcacggtccgtacggttcg
ccgcttcagggattcctgcatccaccaccgccggtaaagatcggccaaccattgcctcag
cgccacccgggactgccgggaccaccgtttctgttgcagcataacccaacaccgcacccg
aacaatcaattcaatcagcggcttatgcaggaaatacaacaaaatcatccgatccttgcg
ttcaacagacagctgctcaattcattcaatgcgtgcggtaacggaatgaagatgcatgtg
cctcaaaacctgccaaggccagctctcggcacgcagctgcaatatccgccgcaacagcag
caacgatcacggcaagcagcaggcaccggcataccaccgggtgccggtccggagagagaa
cgcgatgaatacgcaaacatgatgagcaaccgggacaagcagtggctgatcgggatacaa
ctttcgcagctcaactccgacgtaccctattggaacgattactacttcaccgtgtttaag
caaagactggcggaagcgaaagcagatgtggaggaaaaccatatctacgtggaaaacaag
caaagccatccattttccaatactcctaccaaaaaggagcatgcacacctgctactgcta
tcgatgctaacgcggaacgtcaaggtggccggcatgatgaaccgcgaacgtcggagttcc
gagtctaggcctgcggctggcggtaacgatggaaaagatggcagtacggctcgtccctac
acaccgtttcagtttgaaaagtctctcggaaagctgcagtgcggaagtgtaactgcgccg
cgcaagctgatcgatgccgatgtcatgggcggtgaccaactgaacggtaatggtggcata
acggcagccgagcaatctttaacgcagcgcaaagctcggcatgtgctgctgctgattgaa
acactgtacaatctgttgctgaagctggaagacaagcttaacccgatcgccatagcaacg
gccaaagtattgcgcgaaaagcaactacgcgaccatgcgaacatggttggcacagcctac
agcaatggcggttgccctgggaaactggaaaatttcaaagcaaatggcgttaccaacggg
tgcaataatgggttggagccggaagaatccttcgacgagctatgtgaatgtctgctgggt
cagctttcgcaagaaaaagtgacatccatactcggtgtgcggaagggccggaatttactt
cgacgtacgttgggcgtactccacaatcgaccatctcgctggacgctgtggaacatgatc
tttaccgctttgccctgcctggccaagaaggatcgcgacgatgcggattgcctcgtgctg
gcactttacggcgaatttgagcgtcagctacggcacggtacggtggaagatttgctgctg
gtggcgacgtcgatcagcagctcgcgcaaggtgatgcagtgcatcgtcggcagtaagttt
ctgctgtcctgcatcataacgatcatctttcagatggaaatgttttgcggcaagcatccg
gcctccctgctaaccgtttcccaggccaaccaccagtgggtaacgtttctgctggacgtg
aaccaggttgtgaaggagagtgctgccggaccgagagctggtgggagcatttcgatcaat
ccggatgacaatatcttacgcactttgcgcgttcacttcgcccggttcggtacacgggtc
gatgggacggatctgttgaactttattattgattatggcaacggccagcaaaaaaacagg
acaggtaggaaacaatcgctacaggaaacaaaaatcagaacaaagtga
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