Anopheles stephensi (Asian malaria mosquito): 118512556
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Entry
118512556 CDS
T08252
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste04382
Cornified envelope formation
aste04512
ECM-receptor interaction
aste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118512556
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118512556
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118512556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aste04147
]
118512556
00536 Glycosaminoglycan binding proteins [BR:
aste00536
]
118512556
Exosome [BR:
aste04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118512556
Glycosaminoglycan binding proteins [BR:
aste00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118512556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118512556
NCBI-ProteinID:
XP_035913035
LinkDB
All DBs
Position
3:70606401..70635330
Genome browser
AA seq
1818 aa
AA seq
DB search
MLRAADPTLPGGLETKGTVHRRRRCSVRSGTLCLVTLFLTCLLQLVQPSTAAVCNQTVCD
CKGLKGYQGQIGAHGVPGQSGDPGDIGPDGPPGQRGDIGNRGEMGTSGPKGYRGDAGERG
PMGVPGYAGLPGEPGYRGPFGIDGCNGTDGAMGPPGYPGIPGERGPQGPPGGIGPRGDSG
EGGINSKGTKGDRGVAGIPGVPGLPGWQGGRGADGFDGETGPPGNDGLPGLKGERGEPSD
DFCPGEPGDPGEPYHYWGGKNETVSRGMPGPKGDRGNDGMPGLPGMKGDSGMQGERGQKG
FKGEEGKFGDRGKQGKEGPPGAPGEKGEKGAPGYAGLDGMPGDKGPSGDDGRPGLPGVQG
PPGPKGEYRPELAPIVIGPQGPQGDIGPPGRPGNVGIPGNKGLRGPMGPPGPPGDPGLNG
RQGPKGISPPGQRGDDGESGPPGLVGSRGTPGNAGPKGQVGFPGRNLQGPKGEPGTNGLN
GEFGEKGDQGDAGEPGDKGLPGIGVNITGPQGPAGFPGRPGPPGDLGFNGYNGQKGDKGF
RGEDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLPGPRGYQGTPGKQGLRGLLGRKGE
RGDFGERGAPGEPGRPGVIRRAKDFVDLTPEFGDRGDRGQRGDQGLPGDLGDFGPVGYPG
RPGEPGEYGDDGDSGRPGQDGLPGMDGRDGMPGRNAYVNEYNIWSIRGTPGILGDKGAKG
ERGDQGDRGEPGAMSEMTYSIAGAKGIKGSMGDPGPKGEKGYKGEMGLHGLRGLDGPAGL
PGLSIQGPEGYKGYYGVIGDHGPAGITGEDGLPGPDGIPGLQGLRGQRGDPGRPILMGEK
GVEGEGGFYGEIGDKGFKGPEGIRGLSGDTGVKGERGDPGPFGAPGLRGNKGQMGDIIYG
DRGLPGLPGRDGLQAPYGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERG
LQGRMGDMGEEGELGERGFTGDQGHPGLTGARGLPGLRGPKGPSGDPGDMGFPGRDGAPG
RKGERGDFGDVGPRGRKGSASFSGMKGELGEPGMMGPPGYNARPGMMGRKGEEGDAGQVI
DGYQGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGP
RGPVGLRGEQGSRGETGDPGDDGPVGFVGMKGMRGDVGLVGPTGLPGMDGDPGLPGIPGN
VLQRSAQQGDQGDPAPEGPEGDQGPPGLKGQRGYPGRKGDQGLPGFVGQVGREGNDGPKG
QRGDPGMKGQPGELVSRPERGDQGEAGYDGLTGRPGLPGNKGAPGEYGAYGLPGPQGQPG
FVNSALKGRKGEIGFEGAPGQDGLPGLPGLDGVMGPPGPRGMAGSIGQIMPGFRGDMGDD
GLPGLEGMPGPPGFPGDRGLPGLPGLSGLPGPKGQQGDEGLEGYHGLVGLKGMKGEVGDL
PPLSNWRPTQPGDRGTPGARGEPGDEGDIGPPGYPGMRGPKGMQGLQGEEGATGEVGFKG
EMGIAGPPGRSGIEGLPGLPGLPGDPAAPPPPPKNLGFIFARHSQKVTIPECPINTFKLW
DGYSLVNVIASSRSSGQDLGTAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEP
MPMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTS
DNSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDDMQFNRPQQM
TLKAHQTSKVSRCIVCRRKAGIMRALHGGSSITASALRRPETATVTRPLYPPAPPPPAGS
RRRVSPGRQRNRNRNYQG
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgttgagggccgcggaccccacgctaccggggggtctggaaactaagggcaccgtccac
cggaggcgtcgatgttccgtacgctcgggaacactctgcttggtgacacttttcctgacc
tgtttgcttcagctagtacaaccatcaacggcagcggtctgcaaccagacagtatgtgac
tgcaaaggattgaagggttaccagggacagattggagcgcacggtgtacctggacagagc
ggagatcccggagacattggccccgatggtccacccggacagcgcggtgatataggaaat
cgtggcgaaatgggtacgagcggtccgaaaggatatcgaggtgatgctggcgagcgtgga
ccaatgggtgtgccgggatacgcggggcttcccggtgagcccggttaccgagggcctttc
ggtatcgatggttgcaacggtacggacggtgcaatgggaccgcccggctatccaggtatt
ccgggcgaacgtggaccgcagggtccacccggtggtatcggtccacggggagactccggt
gaaggtggcattaactcgaaaggcaccaagggtgatcgtggagtggccggtattcccggt
gtgccggggctgccgggctggcagggcggtcgtggtgccgatggatttgacggagaaacc
ggcccacctggaaacgatggactgccggggttgaaaggcgaacggggtgaaccgagcgat
gatttctgtcccggggaaccgggtgaccccggtgaaccgtaccactattggggtggtaaa
aacgaaacggtcagcagaggcatgccggggccgaagggtgaccgtggaaacgatggaatg
ccgggtttgcccggaatgaagggtgactcgggcatgcagggcgagcgtggtcagaaaggc
ttcaaaggtgaggagggcaagttcggagatcgtggcaagcagggcaaggaagggcccccg
ggtgcgccgggcgagaagggagagaaaggtgcgcccggatatgcaggactggatggaatg
ccgggcgataagggaccgtcaggagacgatgggcggccgggattgccgggagtgcaagga
ccaccaggaccgaagggtgaataccggcccgagctcgctccaatcgtaattggaccgcaa
ggaccgcagggagatattggaccgcccggtcggccgggcaacgtcggcattcccggcaac
aagggtctccgtggaccgatgggacctcccggacctcccggcgatccaggacttaatgga
cggcaaggtccgaaaggtatctcaccgcccggccagcgtggtgacgacggtgaatcaggt
ccaccgggcttggtaggctcgcgtggtacaccgggaaatgcgggaccgaagggtcaggta
ggtttcccgggccgaaatctgcagggaccgaagggcgaaccaggcacgaacggattgaac
ggagagtttggtgagaaaggtgatcagggcgatgctggtgagccgggagacaaaggtttg
cctggcatcggtgtgaacattaccggaccgcagggacctgccggttttcctggccggcct
ggaccgcccggcgatctgggcttcaacggatataatggccaaaaaggtgacaagggtttc
cgcggagaggattgcggcacttgcccaccgggcccgaaaggcgttaagggtgaggatggt
gacatcggacgccccggactcgatgggtacgatggtaaccggggtctgcctggtccacga
ggttaccagggcacaccgggcaagcaaggtctgaggggtttgttgggccgcaaaggtgag
cgcggagacttcggagaacgtggtgcaccgggagaaccgggacggcccggcgtaattcgg
cgagcgaaagactttgtcgatctgacgcccgaattcggcgaccgaggcgatagaggacag
cgtggtgaccagggtttgcccggtgatttgggtgactttggcccggttggatacccggga
cgacctggtgaaccgggcgagtacggtgacgatggtgattcgggacgcccgggacaggat
ggtctgccgggtatggatggccgcgatggcatgccgggacggaacgcctatgtgaacgag
tacaacatctggtctattcgtggcacgcctggtatactgggtgacaaaggtgccaaggga
gagcgcggtgaccagggcgatcgtggtgagccgggtgcaatgtccgagatgacgtacagc
atcgccggtgccaagggtataaagggaagcatgggagaccccggaccgaagggtgaaaag
ggctacaagggagagatgggcctgcatggattgcgtgggctggacggaccggccggtttg
ccgggtctcagcattcagggaccggaaggatacaagggttactacggtgtgattggtgac
catggaccggccggcataaccggtgaggatggactgcccggaccggatggtattcctgga
ctgcagggactgcgcggtcaacgaggtgacccgggacgaccgatcctgatgggcgaaaag
ggtgtggaaggcgaaggaggcttttacggcgagatcggagacaaaggattcaagggaccg
gaaggtattcgtggcctgtcaggtgatacgggagtgaagggcgagcggggcgatccggga
ccgttcggtgcacctggtctgcgcggcaacaagggtcagatgggagacatcatctatggt
gatcgaggattgcccggattgccgggacgcgatggtttgcaggccccgtacggtgacaag
ggtgaacgcggagagccgggcatggaaggattccccggaccgaagggcgagcgaggcgag
atcgggcgcgatggactacccggactgccgggcgacgatggattgccgggtgagcgaggc
ctacagggacgtatgggcgacatgggcgaggaaggcgaactgggagagcgtggttttact
ggtgaccaaggacatccgggtcttaccggcgctcgcggattgccgggattgcgtggaccg
aaaggaccgtcgggtgatccgggagatatgggattccccggtcgggatggtgccccgggt
cggaagggagagcgcggtgatttcggtgacgtaggaccacgtggccgcaagggtagcgca
tcgttcagcggcatgaagggcgagttgggagagccgggaatgatgggcccgcccggatac
aacgcacgacccggcatgatgggtcggaagggtgaggaaggagacgccggacaggtgatt
gatggttatcaaggtgtgaagggacagaagggtgcacccggtttccccggcattcctggt
cggccaggagcgaagggtgagcgtggcgatgttggtgtgtttgggccgaaaggaatctcg
ggcgacaaaggacgcgacggatatccgggcattgccggtcgtccgggacggccgggacct
cgcggaccggtcgggctacgtggtgagcaaggatcacgcggagaaaccggagatcctggt
gacgacggtccggtgggattcgtcggtatgaagggtatgcgtggagatgttggtctggtg
ggacctaccggattgcctggcatggatggtgatccaggtttgcccggcatacccggcaac
gttttgcagcgctcggcacagcaaggtgaccagggtgaccccgcacccgagggcccggaa
ggtgatcaaggacctcccggacttaagggacagcgaggctatccgggccggaagggtgac
cagggattgccaggattcgtcggtcaggttggcagggaaggaaacgacggaccgaaggga
cagcgcggagatccaggtatgaagggacagcccggcgagctagtgtcgcggcccgaacgc
ggtgatcagggagaggccggttacgatggtttgacgggacgcccgggacttcctggcaat
aagggagcaccgggtgagtatggtgcctacggactgccaggtccgcaaggtcagccaggc
ttcgtgaacagtgcactgaaaggaaggaagggtgagattggattcgaaggagcaccggga
caggatggattgccagggttgccaggattggatggtgtgatgggacctccgggaccacga
ggcatggccggaagcatcggtcagattatgcccggtttccggggcgatatgggcgacgat
ggcttgccagggctggaaggtatgcccggcccgccgggcttcccgggcgatcgaggatta
ccgggcctgcctgggctgagtggcctgcccggaccaaagggacagcagggagatgaaggc
ctcgaaggttatcacggtttggttgggctgaagggtatgaagggagaggtgggcgatctg
cctccactttcgaattggcgcccaacacagcccggcgatcgaggtacgcccggtgcacgt
ggtgaacctggcgacgaaggtgacattggaccgccaggctatccgggaatgcgtggcccg
aagggtatgcaaggcctgcagggagaggagggcgctactggcgaggtcggtttcaaggga
gagatgggtatcgccggtccaccgggacgcagcggtatcgaaggactgcccggattgcca
ggactacctggcgatccggccgcacctcctccgccgccaaagaacttgggattcatcttt
gcccgtcactcgcagaaggttacgattcctgagtgtcccatcaatacgttcaagctgtgg
gatggttactccctggtcaatgtcatcgctagcagtcgctccagcggacaggatctcggt
actgccggctcgtgtctgcggcggttcagcacaatgccgttcatgttctgtgatattaac
aacgtgtgcaattacgcctcgaacaatgacgacacaatatggttggccacacccgagccg
atgccgatgtcgatggcaccgattccggcggaccaggtcgaacggtacatctcgcgttgc
agcgtctgcgagtccaacacgcgcgtgatggcactgcacagccagtccatgagcattccg
gactgtcccgaaggctgggaagagttgtggcttggatacagttatgcgatgcacacgtcg
gataattccggaggtttcggacaggactttgtgtcgcccggatcatgcatggaagagttc
cgcccacaaccggttatcgaatgccacggacatggtacctgcaacttctacgacggtatt
tcctccttctggttaacgatcatcgacgatgacatgcagttcaacaggccgcagcagatg
accctcaaagcacatcaaaccagcaaagtgagccgatgcatcgtatgtcgtcgaaaggcg
ggcattatgcgcgcactgcacggaggcagttcgataactgcctcggctctgcgcagacca
gagacggccactgtgacacgccctctgtatccgccagcacctcctccaccagcgggttcc
aggagacgagtgtcaccgggcagacaacgtaaccgcaaccgcaactaccagggctag
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integrated database retrieval system
