Anopheles stephensi (Asian malaria mosquito): 118514524
Help
Entry
118514524 CDS
T08252
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118514524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aste03019
]
118514524
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118514524
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118514524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
118514524
NCBI-ProteinID:
XP_035917391
LinkDB
All DBs
Position
3:50781059..50791869
Genome browser
AA seq
964 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQRE
KEEISTWLTSSITSLQIQIDQFECEIESLLAGKKKKLDKDKQDKMDELKGKLERHKFHVT
KLETLLRMLDNDGVEVEQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDDVEISGIP
VSTGTDSNNSNETAGSPSSLISGTSPAQSPVLNYSASTLHNHSSDLSADNNNLNEKRSKS
DGTKITPVKPTAIRASKVDPSVTAVSNAVNNNGSSNSTSNSSSTTISNNNTSKAGLISST
PSKNHTNAAPALPNMLVLPQPPNSIAIIGPAFAAVAKQHPKNGSILQPSTPTTGTGASPS
SASGPLQTQPPNASNVFSSLSQIINTSQTKLSQQLPPQQQQQPPNSLPSAAAVVAAANSS
SVPSSTQSSASSQQQQQTQQQAQPPQQQQSQQIPPGQNSMLLHSALSSASSTESNNHVMS
TSSASTISSSGANVINNCVSPSNSAVSSRASPSLMSPPQQQQQQQQQQLLNGPTTLAQEV
INRTGGVLETGPSSNPNALMQQQQQQSQQQQPNPQGASAVATAATTAAQQQAAAVAAAAA
AAAAAQAAAVAAVAGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQPQPQPADSRQAG
PVPSNQTPQTQPVGGPGSFMVDASGVPTGAANAGNLLPTSSATAITNGPNAIINTNSSIS
NAANVNSGPGGVMKPSAGTHEACIPPLLGVAPLGTSKLQKEHQIQFQLMEAAYYHLPTPS
DSERLRPYLQRQPVQTPPHFPQQQLPHSETVEFFQRLSPETLFFVFYYMEGTKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLED
RDLN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaatcgatcggtgcctgaagaaagtcactgag
ggtgtagaaacgttcgaagatatttggcagaaagttcacaatgctacaaatagcaatcaa
aaagaaaagtatgaagcggatctcaagaaggaaattaaaaagctgcagcgattgcgcgat
caaatcaaatcatggatcgcttccggcgagatcaaggataaaagcgctctgctggaaaac
cgtcggctcatagaaacccaaatggagcggtttaaggtggtcgaacgggaaacgaaaacg
aaagcatactcgaaggagggccttggtgcggcccagaagatggatccggcgcagcgggaa
aaggaagagattagcacgtggctaacgtcgtcgattacctcgctgcagatacagatcgat
cagttcgagtgtgagatcgagtcactgttggcggggaagaagaagaaactcgataaggat
aagcaggacaagatggacgagctgaagggcaagctcgagaggcacaagttccatgtcacg
aagctggagacgctgttgcgaatgctcgataacgacggggtcgaggtggagcagataaag
aagatcaaggaggacgtggagtactacatcgattcctcgcaggagcccgactttgaggag
aacgaatacatctacgatgatatcattgggttggatgatgtggaaatctctggtatcccg
gtgtcgaccggtacggatagcaataacagcaatgagacagcaggctcgcccagcagtcta
atatctggaactagtccggcgcagtcaccggtgctaaactacagtgccagcacgttacac
aatcacagtagcgatctgtccgccgataacaacaatctgaatgagaagcgttcgaagagc
gatggcacgaagattacgccggtgaaaccgaccgcaatccgcgctagtaaggtggacccg
tccgtcaccgctgtcagtaatgccgtcaacaacaacggcagcagtaatagcaccagtaac
agtagcagcactactatcagcaacaacaatacgtccaaggccgggctgatcagctcgacg
cccagcaaaaatcatacgaatgctgccccggcgttaccgaacatgttggtgctaccgcag
ccgcccaacagtatagccatcattggacccgcttttgctgctgtcgcgaaacaacatcct
aaaaatggttctatactccagcccagcacgcccaccacgggaacgggcgcgtcaccatcg
tcagcaagtggcccactgcaaactcagcccccgaatgcatcgaatgtctttagcagcctc
agtcagataattaatacatctcaaactaagcttagtcagcagctgccaccgcagcagcaa
cagcaaccgccgaacagcttaccgagtgctgccgccgttgttgccgcggcgaatagcagc
agcgtgccgtcgtcgacacagtcgagcgcatcgtcgcagcagcagcagcaaacgcagcag
caggcacagccaccgcaacagcaacaatcccagcagattcctcccggtcagaattccatg
ctacttcacagtgccctgtcgtcggcatcgagtacggagagcaacaatcatgtaatgagt
acatcgtccgcgtctaccatcagtagtagcggggcgaacgttattaataactgtgtctct
cccagcaattccgcagtcagtagcagagcgtcacccagtttgatgtcaccaccgcaacag
cagcagcagcagcagcagcaacagttgttgaacggtcccacaacactcgcgcaagaagtg
ataaatagaacaggaggagtgctcgaaactggtccaagctccaatccaaacgcgctaatg
cagcagcagcagcagcagagccaacagcaacaaccgaatccccagggtgcatcagcagtg
gcgacggcagctaccactgctgcccagcagcaagccgctgcagtagcggcggcggcagcg
gcagcagcagctgctcaagcagcagcagttgccgcggtggccggccagcagcaacagcag
cagcagcagcaacagcaacagcaacagcaacagcagcagcagcagcagcagcagcaacag
cagcagcaacagcagcaaccacaaccacaaccacagccagcagattcgagacaggctggg
ccagttccttcgaatcaaacgccccaaacacagccggttggtggcccgggctcgttcatg
gtcgatgcgagcggtgtaccgacgggggccgccaacgcgggcaacctactaccaacgtcg
tcagctactgccattacgaatgggccgaacgcgatcatcaacacaaactctagtatttcg
aacgccgccaacgtgaacagtggcccgggaggcgtgatgaaaccttcggccggtacgcac
gaagcctgcataccgccactgcttggcgtcgcaccgttgggcacgtccaaactacagaag
gagcatcagatacaattccaactcatggaagccgcctactatcatctgccaacaccaagc
gattcagagaggctaaggccgtacttgcaacgtcaacctgtccaaactccaccgcacttt
ccacagcaacaacttccacattctgaaacggtcgagtttttccagcgtctatcacccgaa
acgctcttcttcgtgttttactacatggagggaacgaaggctcaatatctagccgcgaag
gcgctgaaaaagcagagctggagatttcatacgaaatatatgatgtggttccagcgccac
gaagaaccgaaagtgatcaacgaagagtacgagcagggaacctacatctattttgactat
gaaaaatggggccagcgtaaaaaggaagggtttacgtttgaatacaagtacttagaagac
agggacctgaattga
DBGET
integrated database retrieval system
