Asticcacaulis sp. ZE23SCel15: Q1W73_02030
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Entry
Q1W73_02030 CDS
T09907
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
asti
Asticcacaulis sp. ZE23SCel15
Pathway
asti02020
Two-component system
asti02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asti00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q1W73_02030
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q1W73_02030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
asti02022
]
Q1W73_02030
02035 Bacterial motility proteins [BR:
asti02035
]
Q1W73_02030
Two-component system [BR:
asti02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Q1W73_02030
Bacterial motility proteins [BR:
asti02035
]
Flagellar system
Flagellar assembly proteins
Others
Q1W73_02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_3
AAA_16
AAA_18
AAA_2
AAA
Response_reg
MCM
Mg_chelatase
AAA_19
AAA_22
nSTAND3
AAA_7
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WKL57784
LinkDB
All DBs
Position
complement(443127..444497)
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AA seq
456 aa
AA seq
DB search
MRLLVVGKLSGQMSVAVKMVMDTGAKVSHVEGCQQALDALRKGQGADLLMVDYELDIAGL
IASCDLEHIHITVVACGVNPDPRKAAQAITAGAKEFIPLPPDAELIAAVLAAVADDRRPL
VTQDPAMQQVLKLADQVAGSDASILITGKSGVGKEVMARYLHEKSKRAQKPFISVNCAAI
PDNLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDARLQAKLLRALQERV
IDRVGGAKPVPVNIRVLATSNRNLSVAVKEGTFREDLLYRLNVINLALPPLRERPADIMA
LSEFFAKKYSEANGIALKPLSNEARRRLQAHNWPGNVRELENAMHRAVLLSAGSEIDAEA
IRLPDGKPLNVEAPIGLDYVGRAAQAAESAARTFVGSTVAQVEQVLILDTLSHCLGNRTH
AANILGISIRTLRNKLKEYSDAGVPVPAPQSGANAA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagactattagtagtcggaaaattaagcggtcagatgtcggtcgcggtcaagatggtg
atggatacgggggccaaggtgtcccatgtcgagggctgccagcaggcgctggatgccctg
cgtaaaggtcagggcgctgacctgctgatggtcgattatgagctggatattgcggggctt
attgcgtcgtgtgatctggaacacatccacatcacggtcgtggcctgtggcgtcaatccc
gatccgcgtaaggccgcgcaagccataaccgccggggccaaggagttcattccgctgccg
cccgatgccgaactgattgccgccgtgctggccgcagtggccgatgatcggcgcccttta
gtgacgcaagatccagccatgcagcaggtgctgaaactggccgaccaggtcgcaggctcc
gatgcctcgatcctcatcaccggtaagtccggcgtcggtaaagaggtcatggcccgctac
ctgcacgaaaaatctaagcgcgcccaaaaaccgttcatctcggtcaactgcgcggccatc
cctgataacctgctggaatcggaactgttcggccacgagaaaggcgcgttcaccggcgct
atggcccgtcgcatcggtaagttcgaagaagccgatggcggcacgttgctgctcgatgaa
atctcggaaatggatgcccgtttgcaggccaagctgttgcgcgcgttgcaggagcgggtc
atcgaccgcgttggcggggccaagcctgtgccggtcaatatccgcgtgctggcgacctcc
aaccgcaatcttagcgtcgcggttaaggaaggcactttccgcgaagatttgctctaccgc
ctgaacgtcatcaatctggcactaccgccgcttcgggaacgtccggccgatatcatggcc
ctgtcggaattcttcgctaagaaatactcagaggccaacggcattgcccttaagcccctg
tcgaatgaggcccgtcgccgccttcaggcccataactggccaggcaatgtccgtgaactg
gaaaatgccatgcaccgcgcggtgctgttgtcggcaggctctgagattgatgccgaggct
attcgcctacccgacggtaagccgctcaatgtcgaggccccgattggccttgattatgtg
ggtcgtgccgcgcaagccgccgagagtgccgcgcgcacctttgtggggtcaacggtggcg
caggtcgagcaggttttgattctggataccctgtcgcactgtctgggcaaccgcacccat
gcggctaatattttagggatttcgatccgcaccctgcgcaataagctgaaagaatattcc
gacgccggtgtgcccgtgcccgcgccacagtccggtgccaacgcggcgtaa
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