Asticcacaulis sp. ZE23SCel15: Q1W73_03735
Help
Entry
Q1W73_03735 CDS
T09907
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
asti
Asticcacaulis sp. ZE23SCel15
Brite
KEGG Orthology (KO) [BR:
asti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asti03016
]
Q1W73_03735
Enzymes [BR:
asti01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Q1W73_03735
Transfer RNA biogenesis [BR:
asti03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Q1W73_03735
Prokaryotic type
tRNA splicing ligases
Q1W73_03735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WKL58101
LinkDB
All DBs
Position
complement(826269..827495)
Genome browser
AA seq
408 aa
AA seq
DB search
MQVFEGARGGLIKAWIDGVAIEDAARKQLDNIAAMPFIHKHVAIMPDVHWGMGATIGSVI
PTKGAIIPAAVGVDLGCGMMAIRTTLKAADLPDNLSGLRTAIEQRIPHGRTDNGGVNDRG
AWGEAPKAAQEAFAGLSVELNKITAKHPKINQAASRAHNHLGTLGTGNHFVEVCLDESDA
VWIMLHSGSRGIGNRIGMYFIERAKHEMKRWFVNLPDEDLAYLPEGSELFGDYMGAVSWA
QRFARMNRELMMTAALEALSVSVPKAFTCDCEAVNCHHNYVAHERHFGSDVLVTRKGAVR
ITPETLGIIPGSMGAKSFIVRGIDGKAAAEALCSCSHGAGRAMSRAEAKRRFTLEDHARA
TAGVECRKDADVIDETPAAYKDIDAVMKAQADHVEIVYTLKQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagtgtttgaaggggcgcggggtgggctgattaaggcctggatcgatggcgttgcc
attgaggatgccgcgcgtaagcagttggataatatcgcggccatgccgttcatccataag
catgttgccattatgccggacgtgcattggggcatgggtgctaccattgggtcggtgatc
ccgaccaagggcgcgatcattccggcagcggttggggttgatctggggtgcggcatgatg
gcgatccgcacaacgcttaaggctgccgatctgccggacaatctgtcggggttgcggacg
gctattgagcagcgcattccgcatggacggaccgataacggaggcgtcaatgaccgcggt
gcctggggggaagctcccaaggcggcgcaggaggcctttgccggtttatcggtggaactt
aacaagatcaccgccaagcacccgaagatcaatcaggcggcgtcacgtgcccataatcat
ctggggacgctgggtactggcaaccactttgtcgaggtctgccttgatgaaagcgatgcc
gtatggatcatgctgcattcgggttcgcgtggcattggtaaccggattggcatgtacttt
atcgaacgcgccaagcacgagatgaagcgctggttcgtcaatttgcctgacgaagacctt
gcctacttgcccgaaggctctgagcttttcggcgactatatgggtgcggtgtcttgggcg
cagcggtttgcccgcatgaaccgtgaattgatgatgacggcggcgcttgaggcgttatct
gtatcggttcccaaggcgttcacctgtgactgtgaggcggttaactgccaccacaactat
gtcgcccatgaacgtcatttcggctcagacgtactggtgacccgtaagggggctgtgcgt
atcacgccggaaacgctgggcattattccgggttcgatgggggctaagtccttcatagtg
cgcggtatcgacggtaaggcggccgccgaagccttgtgttcgtgttcgcacggcgcgggt
cgggctatgtcgcgggccgaagccaagcgccggttcactctggaagaccatgcccgtgca
actgcgggtgtggaatgtcgtaaggacgcggacgtgatcgatgagacgcccgcagcctat
aaggatatcgacgcggttatgaaagctcaggccgaccacgttgaaatcgtttacaccctc
aagcaggttgtctgtgtgaaggggtag
DBGET
integrated database retrieval system
