Asticcacaulis sp. ZE23SCel15: Q1W73_04080
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Entry
Q1W73_04080 CDS
T09907
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asti
Asticcacaulis sp. ZE23SCel15
Pathway
asti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q1W73_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asti03019
]
Q1W73_04080
03400 DNA repair and recombination proteins [BR:
asti03400
]
Q1W73_04080
Enzymes [BR:
asti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q1W73_04080
Messenger RNA biogenesis [BR:
asti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q1W73_04080
DNA repair and recombination proteins [BR:
asti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q1W73_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
DUF4269
Motif
Other DBs
NCBI-ProteinID:
WKL58167
LinkDB
All DBs
Position
complement(897462..899036)
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AA seq
524 aa
AA seq
DB search
MSQALRQLPDASAPADMAAAVKCLRDTFGYERFRGQQAPVIEAILRGDDVLAILPTGGGK
SLCYQIPALIRPGFGLVISPLIALMSDQVQALEAKGVRAARMDSSLNSAERARLWDAARD
GDLDLLYLSPEGLVQPYVLDRLAQLDVNLIAIDEAHCVSQWGHDFRPEYRALGQLKGLFP
NVPTLALTATADAHTRQDIKAALRITHATEVIGSFDRPNLSLRFVRRKGPVIKHILEVLK
KQPKAGGIIYSGSRDGTEKLARQLVDQGYRAEAYHAGLSAVEREDRLTRFLSGYTPIMVA
TIAFGMGIDKADVRFVIHADPPASLEAYWQEVGRAGRDGKPAAGVCFYTSTDLGWALRRQ
NLRERDGAPAQSHTQEKALSFHRFMMEPGCRQDMVRQYFGEGAGKPCGHCDNCLSRTKPA
DLTEAAQMLMSALYRFNGPRGRKKLIDHVLGKESGPKDFSTRMKTFGVAKGYDADDLALV
LDYCEALGIAAEEMFDGNKPIVGLKDADLLKQLFRGEIRVELRA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggccttacggcaattaccagacgcatccgcgcccgctgatatggcggcggcg
gtaaagtgcctgcgtgatacctttggctatgagcggtttcgcgggcaacaggctccggtc
attgaggcgatcctgcgcggcgatgatgtgctggccattctgccgaccggcggtggtaag
agcctgtgctatcagatccccgccttgatccggccggggttcggtctggtgatttcgccg
ctgattgccctgatgagcgatcaggtgcaggcccttgaggccaagggcgtgcgcgcggca
cgcatggattcgtcgctgaattccgctgagcgtgcccgtctgtgggatgcggcccgcgac
ggtgatcttgatctgttgtacctgtcgcccgaagggctggtgcagccctatgtgctggac
cggctggcgcagcttgacgttaatctgattgcgatcgatgaagcccactgcgtctctcag
tggggccatgattttcggccggaataccgcgctcttgggcaactcaagggactgtttccc
aatgtgccaaccttggccctgaccgctaccgccgatgcccatactcgtcaggatatcaag
gcggccctgcgtatcactcacgcgactgaggttattggcagctttgaccggcccaacctg
tcgttgcggttcgtgcgccgcaaagggccggtgatcaaacacatccttgaggtgctgaaa
aagcagcccaaggccgggggtatcatctattcagggtcacgcgatggcaccgaaaagctg
gcgcggcaactggtcgatcagggttatcgcgccgaagcctatcatgcgggcctctccgcc
gtagagcgcgaagaccggctgacgcggtttttgagcggctacaccccgatcatggtggcg
accatcgcgttcggcatgggcatcgataaggccgatgtccgctttgtgatccatgccgat
ccgcccgcgtcactggaggcctactggcaggaagtcggtcgggctggccgcgatggcaaa
ccggcggcgggcgtgtgtttctatacctcgaccgacctcggctgggccctgcgccgtcag
aatttgcgcgaacgcgatggcgcccccgcccaaagccacacgcaggaaaaggccctcagc
tttcaccgcttcatgatggagcctggctgccgtcaggatatggtgcggcaatacttcggt
gaaggggcgggcaagccgtgcgggcactgcgataactgcctgtcgcgcacgaaaccggct
gatttgaccgaggcggcgcagatgctgatgtcagcgctgtaccgtttcaatggtccccgt
ggccgtaaaaagctgattgatcatgtgctgggtaaagaatctgggccgaaggatttcagc
acgcgcatgaaaacctttggggtggctaagggctatgatgccgatgacctggcgctggtg
ctggattactgcgaagcgctcggcatcgcggccgaggaaatgttcgatggcaataagccg
attgtgggtctaaaggacgcggatttgctcaagcaattgttccgcggcgaaatccgggtc
gaattgcgcgcctaa
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