Asticcacaulis sp. ZE23SCel15: Q1W73_05780
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Entry
Q1W73_05780 CDS
T09907
Name
(GenBank) TIGR03915 family putative DNA repair protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
asti
Asticcacaulis sp. ZE23SCel15
Pathway
asti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q1W73_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asti03400
]
Q1W73_05780
Enzymes [BR:
asti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Q1W73_05780
DNA repair and recombination proteins [BR:
asti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q1W73_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
Sipho_tail
Motif
Other DBs
NCBI-ProteinID:
WKL58495
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All DBs
Position
1274263..1275087
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AA seq
274 aa
AA seq
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MRIVIDRRGDFEEWRDSARYLLSAGIRPDAVEWLDRAALGDDLFGMDKAIAETKAALTVP
RAFVECAQVVVCHADLAGYGVLYRLLWRLQTERHLLRITTDPDVVRAHQMAKSVGRDSHK
MKAFVRFKELPAVEGRARRQFLAWFEPDHYIVGRTAGFFQRRFTDMDWVIATPKGSASWD
GDALTVSAHPACNPELVDDTDDLWRTYFANIFNPARLKVKMMQTEMPKKYWKNLPEADLI
PDLIAGAEERVRAMAAKPATTAPKFHYRIHKIKG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgttatcgaccggcgcggggattttgaagaatggcgcgattctgcccgctat
ctgctcagtgcgggcattcggcctgacgcggtggaatggctggacagggcagcgttgggc
gacgatctttttggcatggataaggcgatcgctgaaaccaaggccgctttaacggtaccg
cgcgcctttgtcgaatgtgcgcaggtggtggtctgtcatgccgatttggccggttatggc
gtactgtacagactcctctggcgtttgcaaactgagcgtcatctgctgagaatcacgacc
gatcctgatgtcgtccgcgcccatcagatggccaagtcggtcgggcgcgacagccataag
atgaaagcctttgtgcgctttaaggaattacccgcggttgaggggcgggcccggcggcag
tttctggcctggtttgagccggatcattatatcgtcggccgtacggccggtttctttcaa
cgacgctttaccgatatggattgggtgatcgcgaccccgaaaggatcagcaagctgggat
ggcgacgcgctgacggtctctgcgcaccctgcctgtaatccggaactcgtcgatgatacc
gacgatctatggcggacctattttgccaatatcttcaatccggcacgcctcaaggttaag
atgatgcagaccgaaatgccgaaaaaatactggaagaacctgcccgaagccgatctgatc
cctgacctgatcgccggtgccgaagagcgtgttcgggccatggcggcaaagcctgcgacc
acggccccgaaatttcactaccgcatccataaaataaaagggtga
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