Asticcacaulis sp. ZE23SCel15: Q1W73_14070
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Entry
Q1W73_14070 CDS
T09907
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asti
Asticcacaulis sp. ZE23SCel15
Pathway
asti03030
DNA replication
asti03430
Mismatch repair
asti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q1W73_14070 (dnaE)
03430 Mismatch repair
Q1W73_14070 (dnaE)
03440 Homologous recombination
Q1W73_14070 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asti03032
]
Q1W73_14070 (dnaE)
03400 DNA repair and recombination proteins [BR:
asti03400
]
Q1W73_14070 (dnaE)
Enzymes [BR:
asti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q1W73_14070 (dnaE)
DNA replication proteins [BR:
asti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q1W73_14070 (dnaE)
DNA repair and recombination proteins [BR:
asti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q1W73_14070 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WKL56786
LinkDB
All DBs
Position
complement(3079816..3083259)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSETGFIHLRVRSAYSLLEGAIKAYDMGKLAQNLSMPAIAITDRCNLYGALEFSQTCKDI
GVQPIVGCALPVKGIGGGLTEKWARIPTVVLLAQDERGYLNLCHLSSIAYVESDGIEEPH
VTWDKIAAYNQGLILLSGGPDGPVDPLFRQNKPDEACVALKAMHEIFGDRFYIELQRHDT
GYGMGGVERGMAEAGLVEYGYGHDIPLVATNDAYFGSADLYKAHEALLCISDSTFMGVSD
RRKVTKDHWLRPASEMREAFKDLPEACDNTLEIAKRCAFLVAKRDPILPRFDTGDGRNEA
EELAFQAREGLKMRLQEVKPAFPEQDYWDRLEREIGVIQNMGFPGYFLIVSDFIKWGKTH
GVPVGPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEV
ITYVQNKYGRDRVAQIITFGTLQARAVLRDVGRVMQLPLGQVDRLAKMIPANPANPVTLA
QALDLEPRLRQAAKDDEPVKKLLDTALRLEGLYRNASTHAAGIVIGDRPLTELVPLYRDP
RSDIPATQFNMKWVESAGLVKFDFLGLKTLTVLDRAMKYLRKRGVEINFSTLPLDDGPTY
ELLASGQSIGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMDNIDTYVDRKFGRA
DIDMLHSSLEPVLKETYGVIIYQEQVMQIAQILSGYSLGEADLLRRAMGKKKKEEMDLQK
ARFISGASEKGVDPRQSDSIFELVNKFAGYGFNKSHAAAYAFISYQTGYLKANHPVEFFA
ATLSLDIANTDKLAVFYQDARRFGVKICPPDINRSMADFDVENGEVLYALGAIRNVGFEA
MQTVVQARQEGGKFKDLFDFLERIDPKAVNKRAIENLAKAGAFDLIHPNRTQIVQAADIL
MAYAQSVAAERASSQVTLFGATEAARPRLPKVASNSGPDSLDDELAAVGFYLSGHPLGDM
LDVFKRRSVTLYAEAVGLASEGQEAFRMVGVVRRRQERASAQSGEKFAFVTLSDPTGEYE
VMFQPEALRRCREVLDPGKSIVVKVRCKGGREGEMRMFGDEAALMADTLKMDDIGLRLHV
SSRGLDIVTLKEFLDKSKAPSGGEISLLTELGSDREVEIKLPDRYRLDGHLRGALKSMAG
VLYYEDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccggatttattcatctgagggttcgttcagcctattcactgcttgaaggg
gccataaaggcctatgatatgggcaagctggcgcaaaatctttcgatgccggcgattgcg
attaccgatcgctgtaacctgtacggtgcgcttgaattttcccaaacgtgtaaagatatt
ggggttcaaccaattgtaggttgcgccctgcctgtcaaaggtattggcggtggtttgacc
gagaagtgggcgcgtattcccacggttgttctgctggctcaagatgagcgagggtatctc
aatctgtgtcatttatcttcgattgcctatgtcgagtcagatggtatcgaagaacctcat
gttacatgggataaaattgcggcctataatcaagggcttatacttttatcgggcggccct
gatggcccggtcgatccattattcaggcaaaataaacccgatgaagcgtgcgtcgccctt
aaagctatgcatgagattttcggtgaccgattttatattgagttacagcggcatgatact
ggttatggtatgggcggtgttgagcgcggcatggctgaggctgggcttgttgaatacggc
tatggccacgacattccgttggttgcgactaatgatgcctattttggcagcgcagatctc
tacaaggctcacgaagccttattgtgcatatctgatagcacgttcatgggggtatctgac
aggcgtaaggtaaccaaagatcactggttgcgtcccgcaagtgaaatgcgtgaggcgttt
aaagacctgccagaagcatgtgataacacgcttgagattgctaagagatgcgcatttctg
gtggctaaacgtgatccgatcttgccaagatttgacacaggtgacggccgtaacgaggct
gaagaactggcatttcaggcacgggaagggcttaaaatgcgccttcaggaagttaagcct
gcttttccggaacaggattattgggatcgtttagagcgtgaaatcggcgttatccagaat
atgggatttccgggttactttctgatcgtttcggactttatcaagtggggcaagacgcac
ggtgtgccggtcgggccgggccgggggtcgggggctggttcgcttgtggcttgggcactg
accattaccgatcttgatcctctgcggtttggattgctttttgagcgcttccttaatcct
gaacgcgtttcaatgcccgacttcgatatcgatttttgtcaggagcgacgcgaagaagtt
atcacctatgttcagaataagtacggccgtgatcgtgtggcgcagatcattactttcggt
acgctgcaggcacgcgctgttttgcgcgacgtcgggcgggtcatgcagttgccattaggg
caggtcgatcgccttgctaagatgatccccgctaacccggccaaccctgtgacgctggcg
caggcgcttgatcttgaacctcggttgcgacaagccgccaaggatgatgagccggtcaaa
aagctgctggatacagccttaaggctagagggattataccgtaacgcatcgacccacgcg
gccgggatcgttattggtgatcgccctttaacggaattagtgcccctttatcgagatccg
cgttcagatattcccgcgacccagttcaatatgaaatgggtggaaagtgctggtcttgtt
aaattcgattttttggggctgaaaaccctaaccgtacttgatcgtgcgatgaagtatttg
cgtaaacgtggcgtggagattaatttctcgacgctgccattggatgatggcccgacctat
gaacttttagcgtcaggtcagtctatcggcgtgttccagcttgaaagtcagggcatgcgt
gacaccctgcgcaaaatgcgctgcggttcgattgaagaaatcacggccttgatatcgctc
tatcggcctggaccaatggataacatcgatacctatgttgatcgtaagttcggtcgtgcc
gatatcgacatgctgcactctagccttgagccggtactgaaagaaacttacggcgttatc
atctatcaggagcaggtgatgcagatcgcccagatcctgtcaggttacagtcttggcgaa
gccgatcttctgcgtcgggctatgggtaagaagaaaaaagaagaaatggacttgcagaaa
gcaaggtttatttccggcgcgagtgaaaagggcgttgaccccaggcagtcggactcaatt
tttgagcttgtgaataaatttgcgggctacggctttaacaaatcgcacgcagccgcctat
gcgttcatctcgtatcaaaccggctacctaaaggccaatcatccggtcgagttttttgcg
gcaacgcttagtctcgatatcgccaataccgataaactggccgtattttatcaggatgca
cgccgtttcggtgtgaagatttgcccgccggatattaatcgatccatggcggatttcgat
gtcgaaaatggcgaagtgttgtacgcgcttggagccatccgaaatgttggctttgaagct
atgcagaccgtggttcaggcgcgtcaagagggcggcaagttcaaagatttgttcgatttt
cttgaacgtatcgatccgaaagccgtcaacaaacgtgcgattgaaaatctcgcgaaagct
ggcgcctttgatttaatccatcctaaccgtacccaaatcgtgcaggccgcggatattttg
atggcttatgcccaaagtgttgcggcggaacgggcatcttctcaggttactttgtttggg
gccacagaggcggcgcgtccacgtctaccaaaagtagcgagcaattccggtccggacagc
ctggatgatgaattggcggcggttgggttttatctgtctggccatcctttgggtgatatg
ctggatgttttcaagcgtcgaagtgtcacgctttacgctgaggctgtcgggctggcatct
gaggggcaagaagcctttcggatggtaggggttgtgcggcggcggcaagagcgtgcctcg
gcgcaatctggtgaaaaatttgcctttgtgaccttgtctgatccgactggggaatatgag
gttatgtttcagcctgaagccttgcgccgttgccgcgaagtgctcgatcctgggaaatca
atagttgtgaaggttcggtgtaagggcgggcgtgaaggtgaaatgcgcatgtttggagac
gaagcggcactcatggctgacacgctcaaaatggatgatatcggcctgcgattacatgtc
tcgtcacgaggattggatattgtgactcttaaagagtttttggataagtctaaggcgcca
tccggaggtgaaattagccttttgacggaactgggctctgaccgggaagtcgaaattaaa
ttgccggatcgttaccggcttgatggccatctgcgtggggccttgaaatcaatggcgggc
gttttatattacgaagacatatag
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