Asticcacaulis sp. MM231: MMA231_00138
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Entry
MMA231_00138 CDS
T10530
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
astm Asticcacaulis sp. MM231
Brite
KEGG Orthology (KO) [BR:
astm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astm03400
]
MMA231_00138 (recB)
Enzymes [BR:
astm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMA231_00138 (recB)
DNA repair and recombination proteins [BR:
astm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MMA231_00138 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF3638
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAL4865901
LinkDB
All DBs
Position
MM231:137701..141201
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AA seq
1166 aa
AA seq
DB search
MNAQNIAADPKASSFLTANAGSGKTSTLVNRVARLLLGGAKPERILCVTYTKAAAAEMQG
RLFERLGGWAVAADDELARDLASIDEAVHDLPRARALFAKALETPGGLKIQTLHGFCEKL
LRRFPLEAGLSPAFQMLDDLIGGQLSEKASAGLLTLDTPELAEVMAARDRLIRKLKVMGF
ERLLQQFIHQHDDIKAHFDALQAKGDWAHDLFVSLGLEGVCTTHACLEAYENRLEWQLIR
DLAAGLMAGSTSTNQKAGAAFLTLIEAQMAGKPLDFDVLKTVFFTQKDEPRKSPYTKETS
AADALLMDRLAVDVADLMQRLKAAEIAENTLDGLRLFAIFSAIYQTQKRQEGALDFQDLI
NKTKALLSDHLMSVWVLFKLDGGLEHILVDEAQDTSQDQWAIVKALSAEFFSGRGQSDLA
RTVFAVGDEKQSIYGFQGAQPDKFLDAGQYFDAQVRAAEQKFVAPDLVESWRTLPEILGF
VDAVFPAPDLSHALNFTGNTIVHKAQRNAHKGLVELWPLVRPIEAPEVMADDADIAPVDA
PSHEPPSKRLARQLAATIKAEIEAGRSVYTKKTESPRPLHAGDILILVRKRDHLFEHIIR
ELKIAGVPVSGADRLKLGDHIAFQDLRALMRFCLQPNDSLSLACVLRSPLCDLSEDDLYS
LAQGREGPLWGALLDHPDTDDRFAEARVLLLWAHRAAHQLTAFDFLARVLNRRDDAGRSI
KQRFLTRLGDECEDVLEETLALALKGEGVGDSGLSACLDLFEFKAAQIKREQEEGGRSVR
VMTVHGSKGLEAPWVILPIGPQHTSANKDDLLLRGESGDLYLCVGGRKWDTANISAIRAA
KALKDEQEGLRLLYVALTRARDRLTLCGYAGKKATGKNNAFAPWYDLLSDAFARLPETTL
EPMALKAPFDDEEQIKEAVVTLYGARSPLLSAEAAVLAPQVILPDFVTALVAQADVDSER
GKERWAAISQMGDEDREEDERAPSPLESHNGLGRYRRGILIHKLFEILPDIATDKRPEVA
ARYLERQADLTDDQRGEMAQAVMTVLNDARFAEAFGPQSRPEIALAGGIGRTGRGDEIML
SGRIDRLVVTDSRVVIIDYKSNRPAPETAEGAAIAYQRQMAGYVALLRQIYPNHQVEAAL
LWTDGPRLTPLSEALVNLRLGEILSR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcaaaatatagcggccgatccgaaagcctcgtctttcctgaccgccaatgcc
ggttcgggtaagacctcgaccctcgtcaaccgcgtggcgcgcctgttgctgggcggcgcc
aagccggagcgcattctgtgcgtcacttataccaaggcggcggcggccgaaatgcaaggc
cgtctgttcgagcgcctaggcggctgggccgtggcggccgatgacgagctggcgcgtgac
ctggccagcatcgatgaggcggtacacgatctgccgcgcgcccgcgccctgttcgccaag
gcgttggaaacgccgggcgggctgaaaatccagaccctgcatggtttctgcgaaaagctg
ctgcgccgtttcccgctcgaagccgggctatcacccgcctttcagatgctggacgatctg
atcggcgggcagttgtcggaaaaggccagcgccggtctgctaacgctcgatacgccggaa
ctggctgaggtgatggcggcgcgcgaccgactgatccgcaagctcaaggttatgggcttc
gagcggttattacagcagttcatacatcaacacgatgacatcaaagcacattttgacgcg
cttcaggccaaaggcgactgggcgcatgacctgtttgtcagtctggggctggagggtgtc
tgcacgacacatgcttgccttgaggcctatgaaaaccgtctggagtggcaactgatccgt
gatctcgccgccggactgatggcgggcagcaccagcaccaatcagaaggcgggggcggcc
ttcctgacgctgatcgaggcgcagatggccggtaagccgctcgatttcgacgtgctcaag
acggtgttcttcacgcaaaaggacgagccgcgcaaaagcccctacaccaaggagaccagc
gccgccgacgccctgctgatggaccggctggcggtcgatgtcgctgatctgatgcaacgc
ctgaaggcggcggaaatcgccgaaaacacgctggatggcctgcgcctcttcgccattttc
agcgccatctaccagacgcagaaacgtcaggaaggcgccctcgatttccaggacctgatc
aataagaccaaggccctgctgtctgatcacctgatgtcggtctgggtgttgttcaaactc
gatggcgggctggagcatattctggtcgatgaggcgcaggatacctcgcaggatcagtgg
gctatcgtaaaggctttgtcggcggaatttttctccgggcgcggccagtcggatctggcg
cgcaccgtcttcgccgtaggtgatgagaaacaatccatctatggttttcagggcgcgcag
ccggataagttccttgatgccggccagtatttcgacgctcaggtgcgcgccgctgagcaa
aaattcgtcgcccccgatctggtcgaaagttggcgcaccctgccggagattctcggcttc
gtcgacgccgtcttcccggcgccggatctgtctcatgcgctcaatttcaccggcaatacg
attgtgcacaaggcgcagcgaaacgctcacaagggtctggtcgagctatggccgctggtg
cgcccgatcgaggcaccggaggtaatggcggatgacgccgatatcgcgccggtcgatgcc
ccgtcgcacgaaccgccgtcgaaacggttggcgcggcaactggcggccaccatcaaggcc
gaaatcgaggctggccgcagcgtctataccaagaaaaccgagtcgccgcgtccgctccat
gcgggcgatatcctcattctggtgcgcaagcgcgaccatctgtttgaacatatcatccgt
gaactgaagatagccggtgtgccggtttccggcgctgaccggctgaaactgggcgaccac
atcgcctttcaggacctgcgcgccctgatgcgcttctgtctgcagcccaatgacagcttg
tcactggcctgcgttttgcgcagtccgctatgcgatctcagtgaggacgacctttacagt
ctggcgcagggccgcgaaggccctctgtggggcgcgctgctcgatcatcccgatacggac
gaccgtttcgccgaagcgcgcgtgcttctgctatgggcacatcgcgcggcgcaccagttg
accgcctttgattttctggcgcgggtgctcaatcgccgcgatgacgccggacgctcgatc
aagcagcgtttcctgacccgccttggtgatgaatgcgaggatgtgctggaagaaaccctg
gccctggcgctgaaaggcgaaggcgtgggcgatagcggcctctccgcctgtcttgatctg
ttcgagttcaaggcggcgcagatcaagcgtgagcaggaagagggcggccgttcggtgcgc
gtcatgaccgttcacggctcgaaggggctggaagcgccttgggtcatcctgccgatcggg
ccgcagcacaccagcgccaacaaggacgatcttctgctgcggggtgagagtggtgacctt
tatctatgcgtaggcggacgaaagtgggatacagccaatatcagcgccatccgggcggcc
aaggcgctgaaggacgagcaggaaggcctgcgcctgctctacgtggccctgacccgcgcc
cgcgaccgcctgacgctgtgcggctatgccggcaagaaagcgaccggcaagaacaacgcc
ttcgccccatggtacgacctgctgagcgatgcctttgcgcgtctgccggagaccacgctg
gaaccgatggccctgaaagcgccgttcgatgatgaggaacaaatcaaagaggcggtggtg
acgctgtacggtgcccgttcgcctctgctgagcgccgaggcggcggtgctggcgccccag
gtcatcctgccggacttcgtgaccgcgcttgtggcgcaggccgatgtcgatagcgaacgc
ggcaaggagcgctgggcagcgatttcgcagatgggcgacgaagaccgcgaagaggacgaa
cgcgcgccgtcgccgctcgaatcgcataatggccttggccgttatcgccgcggcatcctg
atccacaagctgtttgaaattctgcccgatatcgcgacggacaagcgccctgaggtggcg
gcgcgctatctggagcgccaggccgatctcaccgacgatcagcgcggcgaaatggcacag
gcggtgatgacggtcctcaacgatgcgcgttttgccgaggcttttggtccgcaatcgcgc
ccggaaatagcgctggccggtggcattggcagaaccgggcgcggcgacgagatcatgctg
tcgggccggatcgaccggcttgtggtgaccgatagccgcgtggtcattatcgattacaaa
tcgaaccgcccggcgccggagacggcggaaggcgccgccatcgcctaccagcgccagatg
gccggctatgtcgccttgctgcggcagatctatccgaaccaccaggtcgaggcggcgctt
ttgtggacggatggaccaagattgacgcccttaagcgaggctttagtaaatctcaggctt
ggcgaaattttgagtcgttga
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