Asticcacaulis sp. MM231: MMA231_01690
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Entry
MMA231_01690 CDS
T10530
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
astm Asticcacaulis sp. MM231
Brite
KEGG Orthology (KO) [BR:
astm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
astm03009
]
MMA231_01690 (rlmD)
Enzymes [BR:
astm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MMA231_01690 (rlmD)
Ribosome biogenesis [BR:
astm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MMA231_01690 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
zf-C3HC4_3
Methyltransf_12
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CAL4867435
UniProt:
A0AAT9IVQ0
LinkDB
All DBs
Position
MM231:1687140..1688378
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AA seq
412 aa
AA seq
DB search
MAEFEALIEKVGFQGDGITSGGLIVPLTLPGERVVVREGKDRLELVEVLEASPDRVTPPC
RHFSACGGCSLQHWDMTAYSDWKQAMVEVFLQRAGLETEVAPIVTTPAESRRRVGLHARK
NGKHIELGFKARKSWNLVAIQECPVSEPTIVKALPKLKELAGYLFEHPKSAPILHITLSM
TGLDIDITGVERMKSGGLSADARMNIAMCAGEADFARVSMGEDMLYMARTPKVRFGKAMV
GLPISPFLQASASSEIDMAKLVVVGIGDAKKVADLFCGAGTFTFPLAEKAAVYAIDGSAP
AIHALKTGIASAPGLKTITAEARDLFRRPMLAEDMKGFEAIVFDPPRAGAEAQSAEIARS
QVPRVVAVSCNPSTFVRDAKILVNAGFSLDRVTPIDQFLWSGHVELVGVFSR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttgaggctctaattgaaaaagtgggttttcagggcgatggcatcacctct
ggcggcctgatcgtacccctgaccctgccgggtgagcgcgttgttgtgcgcgaaggtaaa
gaccggctggaattggttgaggtgctggaggccagccccgatcgcgttacgccgccttgc
aggcatttttcggcctgtggcggatgcagcctgcaacattgggatatgaccgcctacagc
gactggaaacaggcgatggtcgaagtcttcctgcaaagagcggggcttgagaccgaggtg
gcgccgatcgtgaccacaccggcggaaagtcgtcgtcgcgtcggcctgcatgctcgcaag
aatggtaagcatatcgaactgggcttcaaggcgcgcaagtcatggaacctggtagccatc
caggaatgcccggtctcggaaccgaccattgtcaaggctctgcccaagctgaaagaactg
gctggctatctgttcgagcatccgaagtccgcgccgatcctgcatattaccctgtcgatg
accggactcgatatcgatatcaccggcgtagagcgcatgaagtcaggcggcctttcggcc
gacgcgcgcatgaacatcgccatgtgtgccggcgaggccgatttcgcccgtgtttccatg
ggcgaggatatgctctatatggcccgcacgcccaaggtgcgttttggcaaggccatggtt
ggcttgccgatctcgcccttcctgcaagccagcgcgtcctcggaaatcgatatggcgaaa
ctggtggtggttggcattggtgatgcgaaaaaggtcgcagatcttttctgtggcgccggc
accttcacctttccgctggcggaaaaggccgcggtctacgccatcgatggctctgcgccg
gccatccacgccctgaaaaccggcatagcgtctgcgccagggctgaaaaccatcaccgcc
gaagcgcgcgacctgttccgccggcccatgctggctgaagatatgaagggttttgaagcg
attgtcttcgatccgccgcgcgctggcgccgaggcacaatcggccgagatcgcgcgctca
caagtgccgcgtgttgttgccgtgagctgcaatccgtccaccttcgtgcgcgatgctaaa
atccttgtgaacgctggcttttcgctggacagggtgacgccgatcgatcagttcttgtgg
tctggccacgttgagctggtaggagtattttcgcgttga
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