Entry |
|
Name |
(RefSeq) transcription initiation factor TFIID subunit 4-like
|
KO |
K03129 | transcription initiation factor TFIID subunit 4 |
|
Organism |
astr Antennarius striatus (striated frogfish)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:astr00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137587714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:astr03021]
137587714
03036 Chromosome and associated proteins [BR:astr03036]
137587714
Transcription machinery [BR:astr03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137587714
Coactivators
SAGA/TFTC/STAGA complex
137587714
Chromosome and associated proteins [BR:astr03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137587714
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(3301680..3312037)
|
AA seq |
885 aa
MRIGEWVDSPPCSCVSAGGVISSPGSHALSMDGTASAAAAAAPSLTAAQSQSKLGAGSGV
APVPPDGATGAGKTGTTGAETFNGSTAGMDGPVPADSNGDVPLVDNGAGAGPGKRDGASG
TIVRTSSGVHTAVISSPVSGKTLPTVTLVRPPMQTPSRTSPVLTPPAPSGTAGSHLQTGG
QVVVSAVATGATTTPRTPSLVQNVRASVPATTAAASGGIRAITPQVLAPRLPQPQPGSPN
IQNIHLPPGMVLVRSESGQLLMIHQQALAQMQAQTQSQSAMTPRPAAPTTTTTPPVQITS
LQAPSASLLPRPITPTTIIKQASAVQTTVTATTTLQRPPVLQNAIVLGGAVTAPGQTLGA
PATTQPGPATAAQRVGPLATTGAPVTAAAITTETLENVKKCQNFLSTLIKLASSGKRSSE
TTANVKELVKSLLEAKLEPEDFTSKLYKELNSSPQPCLVPFLKRSIPALRQMTPDSEAFI
QQSLQPPAGAGAAAGASTTLKAVMLQPPLSTAAAAAATATSITTTKATVISLSQLPHSKP
GMIVPQQQGATSRTQVTLTQPPMITLRGQPHSRIIVGQPQVVKQLQSGVIPAAKHIFTPG
AKGVQVISQTALTAAQKNKLKEAGGGTFRDDDDINDVASMAGVNLSEESANILATNSELV
GAVTRSCKDESFLSTFSLSRRVLEIGKRFGVGELGTDVVNFISHATQQRLQNLLEKVSQV
AQMKNMNFKEDDQYQLIGDVRAQLKFFEQLDQAEKQRKEEVEREILLKAAKSRSRQEDPE
QLRLKQKAKEMQQQELAQIRQREANLTALAAIGPRKKRRTDSPLWGNGAEGSGSGSSQPG
GSGGAGSRHFIRQRITRVNLRDLLFCLENERGTSRSKLLYRGFLK |
NT seq |
2658 nt +upstreamnt +downstreamnt
atgcgcatcggagagtgggtcgactcccctccgtgttcatgtgtctccgccgggggtgtt
attagcagcccggggtcccacgctctcagcatggacgggaccgcatcggcggcggcggcg
gcggctccgagtctgacagccgcgcaaagtcagtccaaactgggggcaggtagcggtgtc
gccccggtgccgccggatggagcgactggcgcggggaaaacaggaaccaccggtgcggaa
acttttaacggaagcaccgcggggatggacggtcctgttcccgctgacagcaacggagac
gtcccgctggtcgacaacggagccggagccggaccggggaaaagagacggcgcgtccggc
accatcgtgcggacttcttccggtgttcacactgccgtgatttcatctccagtctctggg
aaaactctccccaccgtcacgctggtcaggccgcctatgcaaaccccgtcgaggacgtcc
ccggtgttgacacccccggctccgagcggcaccgccggttctcatctgcagaccgggggg
caggttgtggtttccgctgttgctacaggggcgacaaccacccccaggaccccgtctctg
gtgcagaatgtccgggcttcagtcccggcaacgaccgctgcagcttccggaggaatccga
gcgatcactccacaggtgttggccccccgactcccccagcctcagcccggctcccccaac
atccagaacatccacctccccccaggcatggtcctggttcgcagcgagagcggccagctg
ctgatgattcaccagcaggccttggctcagatgcaggctcagacgcagtcccaaagcgcc
atgacaccccgacctgccgcccccaccaccaccaccactccaccggtccagatcacgtcg
ctgcaggctcccagcgcgtcgctgctgcctcgtcccatcacccccaccaccattataaaa
caagcttctgcggtccagaccaccgtgacggccaccaccacgttgcagaggcctcctgtg
ctgcagaacgccatcgtgctgggaggagctgtcaccgcgccgggacagacgctgggggcc
ccggctacgacacagcctggacctgcaaccgcggcacagagggttgggcctctggcgacc
accggggcccctgtcactgcagcagctatcacaactgaaacactggaaaatgtgaaaaag
tgtcagaactttttgtccacgttaatcaaactggcttccagtggaaaacgttcctctgag
accacggccaacgtcaaggagctggtcaagagcctgctggaagccaagttagagcctgaa
gatttcaccagtaagttatacaaggagctcaactcttcaccacagccgtgccttgtgcct
ttcctgaagagaagcatccccgctctgcgtcagatgaccccggactcggaggccttcatc
cagcagagcctgcagcctccggctggcgccggagcagcggcgggggcctccactaccctc
aaagccgtcatgctgcaacctcctctctccaccgccgccgccgccgccgccacggcaacc
agcatcaccacaaccaaagccacagtcatcagcctctctcagctgccacacagcaagccg
ggaatgattgttccccagcagcagggggcgacatccaggacacaggtgacgctgactcag
cctcccatgatcacactcagagggcagcctcatagtcgcatcattgtgggccagccacag
gtggtcaaacagctgcagtcaggtgtgattccagcagcgaagcacatatttactccggga
gccaaaggagttcaggttatcagccagaccgccctcaccgccgctcagaagaacaaactg
aaagaagcaggaggaggaacgttcagggacgacgacgacatcaatgacgtggcgtccatg
gcgggggtcaacctgtcggaggagagcgccaacatcttagctaccaactccgagctggtc
ggcgcggtgacccgttcctgtaaggacgagagcttcctgtccaccttctcactcagccgg
agagttctggagatcggcaagaggtttggcgttggagagttgggcacggatgtggtcaac
ttcatctctcacgctacgcagcagcgactgcaaaaccttctggagaaagtatcgcaagtc
gcccagatgaaaaacatgaacttcaaggaggacgatcagtaccagcttatcggcgatgtg
agagcccagcttaagttcttcgagcagctggatcaggcggagaagcaaaggaaggaagag
gtggagagagagattctcctgaaggccgccaagtctcgctcgcggcaagaggaccccgag
cagctccggcttaaacagaaggccaaagagatgcagcagcaggagctggctcagatcagg
cagagggaagccaacctgacggcgctggcagcgatcggcccgaggaagaaacggaggacg
gactctcctctctggggaaacggcgccgagggctcggggtcgggctcgtcccagccgggg
gggtcaggcggagcaggctccagacactttatacgacagcgcatcaccagagtcaacctc
agggacctgctcttctgcctggagaacgaacgggggaccagtcgctccaaactgctctac
agaggcttcctcaaatag |