Antennarius striatus (striated frogfish): 137587993
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Entry
137587993 CDS
T10427
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
astr Antennarius striatus (striated frogfish)
Brite
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137587993 (tnrc6ba)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137587993 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
137587993
NCBI-ProteinID:
XP_068160780
LinkDB
All DBs
Position
21:5951503..5972021
Genome browser
AA seq
2121 aa
AA seq
DB search
MEDKKRKKDDKRKREASQKVAEQKNKVPDSTKPASAQSPATQSSSASPSPGPTPSASPSP
ATLGPGSAATPSQGGNNAKRLAVANGQPTSTNISSSSVGGPGAAGNSGASSGAQAPQQQP
RYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGGDGPNANMAAVSDSGAASSSLA
LTSSSVAASTTTSNYANTMWGMSSSSQTSSQGREKVIVDGNDLEEWPSIAGSDGGGASFT
GVGGGSGSNNNSMPGNSISGSGNQSSPTSSFSLSNECMQSSNSVAWGMSASQGHLGGGSA
AAAVGPLLQQPSSLSKASTVPGGHDASGPANGSSGIPGANFNPNANPSAWPALVQQDGPA
AAAGEGNPSSFHHQGPGGSLSANNSACLGLGGGAVGVLASHPPLSVNQSSTHQRQLHQMQ
SRDRDIGGGKWDSESMGPKTAGGDGIVGGMDRGVGGGEIGVGDHSLNSSWRGHPSYSAAN
SKIGASRTDGWEGGGGGVGGFGAAEGDNGTSSWGYPSSAGGVNAWDSAGTGANGSQTSGL
SQGGWGSSGVGGERGGSGGDWSGSSTGVGGANPGGEAMGGACSSNSSSSGGSTAGNPPAS
TSSSSTVTTVTRAWDNQKGEGETGEWDGIGEGRGGSSSSGGNSRSGSGPSSGHSRSHHSA
PNAEAALQNLLSRSDLDPRVLSNTGWGQTQIRQNTSWVLEEHGVKSKSGSSATSKQSSSL
SGSSQYSGGPRTQVADAVGLGANSALIPSTGSSAEGWESSSNSSSSGASLSGRTPLPSGT
NVRNLGVSQSGAVTTTGSGMGSGVIPGHSQQGKATGWGGGGMDSQEAKGWGSEEWGERSR
GGNGGGWGDHGQQGDPGSGGWGGSQEEKGTGGLKDMERGNGGSGWALGQKVGAGRDWGEQ
QSKGNSGWDDGRMNGGNSGGDSGGGGWGSWDDGAPRRTWGAGGGGGGGGGVGAMGSKPNQ
SWSSGNKTHQMPNSLPGSIAGPQAQLQQQQSQPRNQHPQRQQVSDQGAMQGGVGRKSVSQ
AQNQNQSSGWTSGPIPGGSGGGGGGSEPSGWEEPSPQSISRKNEIDDGTSAWGDPTHYNY
KPVNLWDKNSAPAGQQPHDHSQVQQQQQQQQQQQGPPIQQQPCRQAAGPNRDFSTGHGPG
KTPAMGPSGWGGTSPSSPPVDNGTSAWGKPSDAPTGWGDPDDTGGKTAGWGNPAPNLIKS
GSKSMQDDWGDKEVSVTASRHSSWEDEEEGGGIWNSTGSQGSGSSWGQGSNGGWGQSTAG
KKPSNKGPLKTGGGDSWMSPVNRQFSNMGLMNDDPSGPNIDLALQEKKMDMEKRGMGMSD
YNGDMRKGGRGGGVAYRPPISKEAATAEAHSFYDKTLPLTNQDWCLGEEGPCSLYSPPTV
YKPHPLFNHTIPFRQGSHSIFGSGGGMAQSRHQQTVPPINQSPGIRAQVPHQFLSPQVPG
SMLKQVPPPSGSVGGVAGLGGGVFPPQLSPQHIAMLSSIYPPHVQFQLACQLLLQQQPQQ
QQQQQQQQQQQQQQQQQQQQLLQNQRKFAPNVRQQTDPQQLARIMAVLRQQQQQVGGLGG
SSKLSPSHHGGVGGGGPKLPGTDPVPHPGLAGSVTDMHQKNLGPYSGFSSGVNLPGMDLG
GSVVGGPGGMKDLGGQQSRFKWMMEGHSSPDTTSLENAFHKNGPVTPMKMPGASPYSQYD
MMVGDGLGDNWHRTPGNKMGVKPPTTPSWPPEFHPGVPWKGIDRADPESDPDMTPGSMMG
NAVSPNLNDTEHQLLQDNPDSTPPLNTLLPSPGAWPYRASDSPLSNAHNSAKYTEYKTSW
PPEPIGHKSWKASRSNSSQNQLSRPPPGLASQKQPLPSPWSGGGPRLAGRGWTSGSSTAG
STWSDGSSRESCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGTALIRYSSKQEA
AKAQSALHMCVLGNTTILAEFVSEEDVTRYIAHSQAGGAGSGGTTASSAGSGPTAASAVG
ANNANGGSCERAGAASSGGGGGRGGGDGGSTAGGVGSGANANSNSGWQSLDSTGSSSDQS
VIQGPGLGIFTQWSNNGANVGGAGGVEAGRHGLWGGMGSMSGAGYPSSSLWGTPALEERH
QMGSPASLLPGDLLGGGADSI
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaagacgacaaaaggaaaagggaagcctctcagaaggta
gcagaacaaaaaaacaaagtgccagactcgaccaagccagcgtctgcccagtctcctgcc
actcagagcagctctgcctcccccagccctggacccaccccctctgcctccccatcccca
gccaccttgggccctggcagtgctgccaccccatcacagggcggcaacaatgccaagcgc
ctggcggtggccaacggacagcccacctctaccaacatttcttcctcttccgttggtggc
cccggtgctgctggaaacagcggcgcgagtagcggagcccaggcgcctcagcagcaaccg
cgctacatgccgagagaagtgccgcctcgattccgctgccagcaggaccataaagtgcta
ctgaagagaggtcagccgccactgtcctccatgctgctgggaggcggaggaggaggagat
ggccccaatgcaaacatggctgctgtctcagattcgggtgcagctagctcctcactggcc
ctcacctcatcatcagttgctgcttctactactacttctaattatgcaaataccatgtgg
gggatgagctcgagcagccagacctcctctcagggcagggagaaggtaatcgtcgatggc
aacgacctggaggagtggcctagcattgccggtagtgatggaggaggagcttctttcact
ggggtcggagggggtagcggcagcaacaacaacagcatgcctgggaacagcatcagtggc
tccggcaaccagtcgtcacccacttcctcgttctctttgtccaatgaatgtatgcagtcg
tccaacagcgtggcatgggggatgtctgcctcccagggtcatcttggaggagggagtgca
gcggcagcagtcgggcctctgctacaacaaccctcctcactttccaaagcctctactgtg
ccggggggccacgacgccagtggccccgcgaacggcagcagtgggattccaggtgccaat
ttcaatccaaatgccaacccttcggcctggcctgccctggtgcagcaggatgggcctgct
gctgctgcaggggaaggaaacccatcgtccttccatcaccagggccccggagggtctttg
tctgccaacaactctgcttgcctggggctgggaggcggggcagtcggggtgctcgcgagt
cacccacctttatctgtgaatcaatcaagcacccatcagcgccaacttcaccaaatgcaa
tcaagagacagagacattggaggggggaagtgggacagcgaatcaatgggaccaaaaact
gcagggggggacgggattgtcggtggtatggaccgtggtgttggaggaggtgaaatagga
gtgggagaccacagcctcaactcctcctggagaggccatccctcttactctgcagctaat
tccaaaattggtgcctcaaggactgacgggtgggagggtggaggagggggcgtgggggga
tttggagctgctgaaggagataatggaacctcaagttggggttacccaagttccgctggt
ggagtaaatgcttgggacagtgctggaactggggcaaacggtagtcaaacctccgggtta
tctcagggagggtgggggtcatcaggagtaggaggggaaagagggggttccggtggcgat
tggagtgggagctctacgggtgtgggtggagctaatccaggaggtgaggcaatgggtggg
gcctgcagcagcaacagcagcagtagtggaggcagcacagccggtaacccccccgcctcc
acctcctcttcctcaacagtcactaccgtgacgagagcttgggacaatcagaagggagag
ggggaaactggggagtgggatgggataggagaaggacgtggggggtcctcttccagcggt
ggaaattccagaagtgggagtgggcccagcagcggtcacagtcgttctcatcactcggca
cccaacgctgaagctgccttacagaacctgctaagccgatctgatctggaccctcgagtc
ttgtccaacacggggtggggccaaacgcagattcgacaaaacacatcctgggtcttagaa
gagcacggagtgaaaagtaaaagcggatcttctgctacatcgaaacagtcatcttctctt
agtggttcttctcagtattccggtggaccgaggacccaggtagctgacgcggttggactc
ggggccaattcggccctgattccatcaactgggtcctccgcagagggctgggagagtagc
agtaacagtagcagcagtggggcgtctctgtctgggagaaccccgctaccttcaggcacc
aacgtgaggaacctgggcgtatcacaatctggggcagtgaccacaacaggatctggtatg
gggtcgggggtcataccaggacatagccagcaagggaaggctactggctggggtggggga
gggatggatagccaggaagccaaaggttggggaagtgaggaatggggagagaggagtaga
ggaggaaatggaggaggatggggtgatcatggacaacagggtgacccagggagtggaggg
tggggaggaagtcaggaggagaaagggacgggggggttgaaagatatggaaaggggaaat
ggaggaagtgggtgggcattaggacaaaaggtgggggcaggtagagactggggagagcag
cagtccaaaggaaatagcggatgggatgatgggaggatgaacggaggaaactcaggtggg
gattcaggcgggggtggttgggggagctgggacgatggtgctcccaggagaacctgggga
gcagggggaggggggggtggagggggaggggtaggggccatggggtccaaacccaatcag
agttggagcagcggaaataaaacacaccagatgccaaacagcctgccgggttccatcgcc
ggcccgcaggcacaactacaacagcaacaatcacagccccgcaatcagcatccgcagcgg
cagcaagtatcggaccaaggggctatgcaagggggcgtggggaggaaatccgtctctcaa
gcccagaatcagaaccaaagctcaggctggacctcagggcccatccctggtggctccgga
ggaggaggaggtggatctgaaccgagtgggtgggaagaaccttcaccgcaatctattagc
aggaagaacgaaatcgatgatggaacatcagcatggggagacccaactcattacaactac
aagccagtcaacctgtgggataagaacagcgcccccgccggacagcagccacatgaccac
agtcaagttcaacagcagcagcagcagcagcagcagcaacagggacctccgatacagcaa
cagccttgcaggcaagctgcagggccgaacagagatttcagcactggtcatggacctgga
aaaacaccagctatgggaccatcagggtggggtggtacttctccaagcagccctccagta
gacaatggaacatcagcttggggaaagcctagtgatgctcctactggctggggagaccct
gatgatactgggggaaagacagcgggttggggaaaccctgctccaaacctcatcaagtct
ggctcaaagtctatgcaagatgactggggggacaaggaggtctctgtgacagcatcacgt
cactcaagctgggaagatgaggaggagggaggcggcatatggaacagcactggctcccag
ggaagcggctcatcctggggacagggaagcaacggaggctgggggcagagcactgcaggg
aagaagcccagcaacaagggtccactgaagacgggtggaggagattcatggatgagcccc
gtcaacagacagttctctaacatggggctgatgaacgacgatcccagtggcccaaacatc
gacctggccctccaggagaagaagatggacatggagaagagaggcatgggcatgagcgat
tacaatggcgatatgaggaagggggggagaggagggggtgtggcgtatcgcccacctatt
tccaaagaggcagccactgcggaggctcattcattctatgataagaccttgccgttgacc
aatcaggattggtgccttggggaggagggtccttgctctctgtactcaccacccactgtc
tacaagccccatcccctcttcaaccacactatcccctttagacaaggcagtcacagtatt
tttggcagcggtggagggatggctcagtcaagacatcagcaaactgtcccacccataaac
cagtccccagggatacgagcgcaagtgcctcatcagttcctgtctcctcaggtgccaggt
tccatgctgaagcaggtgccccctcccagcgggagcgtgggaggagtggcaggactaggg
ggaggtgttttccctccacagctgtccccccaacatattgccatgctcagcagcatctac
ccacctcacgttcaatttcaactggcttgtcagctcctcctccagcagcagccgcagcag
cagcagcagcaacaacaacaacaacaacaacaacaacagcaacaacagcaacaacagcag
ctgctgcaaaaccagaggaagtttgcacccaacgtgcgacagcagactgacccccaacag
ctggccaggatcatggcggttctccgacagcaacagcagcaggttgggggtttaggtggt
agctccaaactttcaccctcccaccatggaggagttggtggtggaggtccaaagctgcct
gggactgatcctgtgcctcatccaggccttgcaggatctgtgactgacatgcaccagaag
aatctggggccgtactctggctttagctctggtgtgaacctacctggcatggacctgggt
ggctctgtggtggggggacctgggggcatgaaggacctggggggtcagcagtcccgcttc
aaatggatgatggaaggacactcttctccagacaccacctcacttgaaaatgcgttccac
aaaaatggtcctgtcacccctatgaagatgccaggggcctcgccctactcccaatatgac
atgatggttggagatggactgggtgataattggcaccgcactcctggcaacaagatgggt
gtaaagcctcccaccacccccagctggccccctgagttccatcctggtgtgccctggaag
ggcattgaccgtgctgaccctgaatctgaccctgatatgacaccagggagcatgatggga
aacgcggtgtcccccaacctcaatgatactgagcaccagttgttacaagataatcctgat
tccacccctcccctcaacaccttgctgccttcacctggtgcctggccctaccgtgcctct
gacagtcccctaagcaacgcacacaactcagcaaagtacacagaatacaagaccagctgg
cccccagagcccattggacacaagtcttggaaagccagccgcagcaacagcagccagaac
cagctgtcccgcccacccccaggactagctagtcaaaagcagccattgccttctccttgg
tccggaggaggccctcgactggctggccggggttggaccagtggctccagcaccgctggc
tcaacttggagtgatggcagctctcgggaaagctgctggttggtgctcagtaacctcaca
ccacagattgatggctccactctgagaacgatctgcatgcagcatggacctctgctgacc
tttcaccttggcctgacccagggaactgctctgattcgctacagctccaaacaggaggcg
gccaaggcgcagagtgcactccacatgtgtgttttgggtaacaccaccatcttggcggag
tttgtaagcgaggaggatgtgactcgctatatcgcacattcccaagcaggaggggcagga
agcggcggaaccacagccagctctgcaggctctgggcccacagcagcctctgctgtgggg
gccaacaacgctaacggaggtagctgtgagagagctggagcagcaagcagtggtggtggg
gggggaagaggaggaggagatggaggttccaccgctggaggagtgggaagtggtgcgaat
gctaattccaactctggatggcagagtctggacagcacaggcagctcatcggaccagtcc
gtcatccaggggcccgggctcggcatcttcacccagtggagcaacaacggcgccaatgtg
ggtggggctggaggagtggaggctggacggcatggcctttggggggggatgggttcaatg
agcggtgctgggtaccccagcagtagcctctggggtaccccggcactggaggaacgtcac
cagatgggcagcccagcttcactgctcccaggagacctgctaggtgggggggccgactcc
atctga
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integrated database retrieval system
