Antennarius striatus (striated frogfish): 137588418
Help
Entry
137588418 CDS
T10427
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137588418
Spliceosome [BR:
astr03041
]
Complex C
Other components
Step II factors
137588418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137588418
NCBI-ProteinID:
XP_068161602
LinkDB
All DBs
Position
21:13321977..13331267
Genome browser
AA seq
1218 aa
AA seq
DB search
MADVGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVIDLAEKQPTFDGFKDLLLQN
GAEFTDSLISNLLRLIQTMRPPSKASTSKVSEDLVKPKSEKDQLKELFPALCRPNDPAPR
KLLDEDDVKVAADAMKELEMFMPSVSGTDSKPSKSRSEKSRRVSRSRSRSRERDRHRDRD
RDRDRERDRRRRHRSRSRSRSRSRDRDRYRERDRERDRGKRREKSSRWNDRSPSPRKDQD
RDSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRRE
GRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGGEEIY
MRNPDRPSNLNQVHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDE
TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQNAL
SKERRELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHA
FGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYL
AEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMT
DGMLLRECLIDSELGQYSIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDA
VKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTG
QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA
ETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRL
YTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLY
TLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPK
DKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM
LGIMDRHKLDVVSCAKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALF
NRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLY
NRYEEPNAWRISRAFRRR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttggagttgacgagctgtcgcagcttgaatatttgtctctggtgtctaaa
gtctgtacggagctcgacaaccatctgggaataagcgacaaagacttagctgaatttgtt
atagaccttgctgaaaaacaaccgacgtttgatggattcaaagatcttttgctccaaaat
ggagccgaatttacagactctctcatcagtaatttgctcaggctcattcagaccatgcgg
cctccttccaaggcatcaaccagtaaagtttctgaagatttggtcaaacccaagtcagaa
aaggatcaattgaaggagctgttccctgcactctgcagaccaaatgatccagcaccaagg
aagctacttgatgaagatgatgtgaaagttgcagctgatgccatgaaagaattggagatg
tttatgcccagcgtcagtggaacagactccaaacccagcaagagcaggtcagaaaagagc
agacgagtcagtcgcagtaggagtagaagcagagaaagagatcgacacagggacagagac
agagacagagaccgggaaagggaccggaggaggcgccatcgttctcgctccaggtccaga
tctcgctctagagatcgtgacagatacagagagagagacagggaaagagatcgtggcaaa
agaagagaaaaatcttctcgctggaatgatcgctcaccgagccccagaaaagaccaagac
agagactctgaccgttggaaggacaaacatgtggaccgtcctcctccagaagagccttct
gttggtgacatctataatggcaaagttaccagtatcatgcagtttggatgctttgttcag
ttggaagggttgaggaaacgatgggaagggttggttcacatttctgaactgcgtagagag
ggccgcgtggccaacgtagctgatgttgtcagcaaaggtcaaagagtcaaagtcaaggtg
ctctccttcacgggctccaagaccagccttagcatgaaggatgtggaccaggagacagga
gaagatttgaatcccaacaggaggagaaatgtaggcccagacggaggggaagagatctac
atgaggaatcctgaccgaccgagcaacctaaatcaggtccacgcccctgagctggagcag
gatgacaccctggagcgcaagagactcactaaaatctctgacccagagaagtgggagatc
aaacagatgattgctgctaatgtcttgtctaaagaagagttccctgattttgatgatgag
acaggaatcctccctaaagttgatgatgaagaagatgaagacttggagatcgagcttgtg
gaagaagaacctccattcctgaggggacacacaaaacaaagcatggacatgagccctgtc
aagattgtcaagaatccagatggctccctgtctcaagcggccatgatgcagaatgccctg
tctaaggagagacgagagctgaaacaggctgcgcgagaggcggagatggactccatcccc
atggggctgaataagcactgggtcgacccgctgccagacgctgacggtaggcagattgca
gccaacatgaggggcattggcatgatgcctaatgacatcccagagtggaagaagcatgcc
tttggaggcaacaaggcctcctatggaaagaagacacagctctccatcctggagcagagg
gagagcctgccaatctacaagctgaaggagcagctaattcaggctgttcacgacaaccag
atccttattgtgatcggagagaccgggtctggtaagaccactcagatcactcagtacctg
gcagaggcaggctacaccaccagggggaagataggctgtacgcagccccgtcgtgtcgcc
gccatgtcggtggccaagagagtctcggaggagtacggttgctgtttgggacaagaggtg
ggttacaccatccgttttgaggactgcaccagccctgagacggtgatcaagtacatgaca
gacggcatgttgttgagagaatgcctgatcgactctgaactgggccagtactcgattatc
atgttggacgaagctcacgagaggacaatccacactgatgttctctttggtttgctgaag
aagactgtacagaaacgcaccgacatgaaactgatcgtaacttcagccacgctggatgct
gtgaagttctctcagtatttctatgaagctcccatcttcaccatcccaggaagaacgtat
ccggttgaggttctctacaccaaagaacctgagacggactacctggatgccagtctcatc
acagtcatgcaaatccacctgactgaacctcctggtgacatcctggtgtttctgacagga
caggaagagatcgacacagcttgtgagatcttgtatgagcgaatgaagtctctggggcct
gatgtccctgaactgatcattctgccagtttattctgctcttcccagtgaaatgcagacc
cggatctttgaccctgcaccgccaggcagcagaaaggtggtgattgccacgaacatcgca
gaaacttctctgaccatcgatggaatctattatgttgtggatcctgggtttgtcaagcag
aaagtgtacaactctaagactggcattgaccagctggtggtgacgcccatctcacaggcc
caggccaagcagagggcaggtcgagccggcaggaccggcccagggaagtgttacaggctc
tacactgagagagcctacagggacgagatgctgaccaccaacgtccccgagatccagaga
accaacttggccagcaccgtgttgtctctgaaggctatgggcatcaatgacctcctgtct
tttgacttcatggatgctcctcctatggagacgctgatcacagccatggagcagctctac
acgctgggggctctggacgacgagggcttgctcacccgactggggagaaggatggccgag
ttccccctggagccgatgctgtgtaagatgttgatcatgtccgtccatctgggctgcagc
gaagagatgctgaccatcgtctccatgttgtctgtccagaacgtcttctacaggcctaaa
gataagcaggccttggccgaccaaaagaaggccaagtttcaccagcctgagggggatcac
ctgaccctgctggccgtctacaactcctggaagaacaacaagttctccaacccctggtgt
tacgagaactttatccaggctcgctccctgcgccgagctcaggacatccgcaaacagatg
ctggggatcatggacagacataaacttgacgtggtatcttgcgctaaagccacagtccgg
gtccagaaagccatctgcagtggcttcttcaggaatgcagccaaaaaggatcctcaggag
ggctaccgcacccttatagaccagcaggtggtgtacatccacccctccagtgctctgttc
aatcggcagcctgagtgggttgtctaccatgagctggtgctgaccacaaaggagtacatg
cgggaggtgaccaccatcgaccctcgctggctggtggagtttgcgcctgccttcttcaaa
gtgtccgatcctacgcgtctcagtaagcagaagaagcagcagcgccttgagcctctgtac
aaccgttacgaggagcccaacgcctggagaatctcccgcgccttcagacgacgttga
DBGET
integrated database retrieval system
