Antennarius striatus (striated frogfish): 137589164
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Entry
137589164 CDS
T10427
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03015
mRNA surveillance pathway
astr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137589164 (cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137589164 (cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137589164 (cpsf6)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137589164 (cpsf6)
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GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137589164
NCBI-ProteinID:
XP_068162806
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Position
22:complement(4310645..4324590)
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AA seq
585 aa
AA seq
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MADGVDHIDIYADVEEEFREEADYPVHEQIDLYDDVISPSANNGDAPEDRDYLDALPSPG
GTEGGKSAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAIRSIGITDVLEIKFFENRAN
GQSKGFALVCVGSEASSRKLMELLSKRELHGQNPIVTPCNKQSLSQFEMQSRKSTQSGQM
SGEGKAGPPGTGPRGGFPMGRGRGRFPGPPGPGGDRFPGPVGPGGPPPHFPGSGMRPDLI
RHQDGPLMDMSFNPFPPGGRNGSWRGRGGMQGPPRPPPGPPGPPGPPGPPPPGQGLPPPL
AGPPNRGDRPPPPVLFPGQFGQPPMGPMPPGPPPPGYGPPPGPPPPQQGPPPPGPFPPRP
PGPIGPPMALAPPPHMPGPPPGGPPPAPHVNPAFFPPPGNNNMPPNDSRGPPGPSDPYGR
PPPYERGDYGPGGRDMEASRTPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIE
TLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSASRRERSRERDHSRSREKS
RRHKSRSRDRHEDYYRERSRERDRHRERDRDRDRERERDREYRHR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggatcatatcgacatctatgccgacgtagaggaggaatttcgagag
gaagctgactatccagtccatgagcagattgacctgtatgacgacgttatatccccgtca
gccaacaatggtgatgctccagaagaccgtgactatctggatgcactaccttcaccggga
ggcacagaaggggggaaaagtgctccgcccaatgtggtgtacacatacacaggaaaaagg
attgccttatacatagggaacctcacgtggtggacgacagatgaggatctgacagaagcc
atccggtcgataggcatcacagatgtgctagagatcaagttctttgaaaacagggccaat
ggccagtcaaaagggtttgcgctggtgtgtgtgggctctgaggcatcatccaggaagcta
atggagctgctatcaaaaagggaactgcatggtcaaaatccaattgtcacaccatgcaac
aaacagtccctcagccaatttgagatgcagtcacgcaaaagtacgcagtcaggccagatg
tctggggaaggcaaagctggtccccctggcacaggccctcgtggaggttttcccatgggt
cgaggcagaggcagatttcctgggccacccggccctggaggagaccgctttcctggtcct
gttggacctggcgggcccccgccacactttcctggctctgggatgagaccagatctgatt
aggcaccaagatggccctctgatggatatgagtttcaatcccttcccgccgggaggcagg
aacgggagctggcgtggcagaggtgggatgcaaggtcccccgcgtccgcctcctggtcca
cctggcccccccggccctccaggtcctccccctcctggtcaaggccttcctcctccctta
gctggtcctccaaatcgcggcgacagaccccctcctcctgttcttttccctggtcagttc
ggccagcctccaatgggacccatgcctccaggcccacctcctccaggttatggaccaccc
cctgggccaccaccacctcagcagggcccaccacccccaggacctttccctcctcgtccc
ccaggccccatcgggcctcccatggctttggctccacctcctcacatgccgggtccccca
ccaggtggtccaccaccagcccctcatgtcaaccctgcattctttcccccacccggcaac
aacaacatgccccccaatgatagccgagggccccctggaccaagcgacccatacggacgt
ccgccaccgtatgaaagaggagattacggcccaggaggccgggatatggaggcatcccgg
acgcctctgagtgaggccgagtttgaggagatcatgaacaggaacagagccatctcctcc
agcgccatatctagagcggtgtctgatgccagtgcagctgactacggcagcgcaatagag
accttggtgacagccatcagtctgattaaacagtccaaagtctcagcagatgaccgctgt
aaggtcctcatcagttccctacaggactgtctccatggcattgagtcaaaaagttacggt
tctgcctccaggcgagagcgttctagggaacgagaccacagccgctcaagagaaaagagc
cgccgtcacaagtcccgcagtcgcgaccgccatgaggactattaccgggaacgcagtcgg
gagcgagaccgccatcgtgagagggatcgcgacagggaccgtgagagagagagagaccgg
gagtaccgacatcgctag
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