KEGG   Antennarius striatus (striated frogfish): 137590318
Entry
137590318         CDS       T10427                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
astr  Antennarius striatus (striated frogfish)
Pathway
astr04382  Cornified envelope formation
astr04510  Focal adhesion
astr04512  ECM-receptor interaction
astr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:astr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137590318 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137590318 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137590318 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137590318 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:astr04147]
    137590318 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:astr00536]
    137590318 (col4a5)
Exosome [BR:astr04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137590318 (col4a5)
Glycosaminoglycan binding proteins [BR:astr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137590318 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137590318
NCBI-ProteinID: XP_068163962
LinkDB
Position
23:complement(3851896..3885433)
AA seq 1681 aa
MRKDLSLRQLAVPLLFFTLWVAVQPSDSAACHGCVGSKCDCSGVKGAKGERGFPGLTGQP
GVPGFPGPEGPIGPRGEKGSDGPGGPIGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGPR
GVAGCNGTKGERGYPGTSGNPGLQGELGQPGFPGQKGEPGDVISTNRFGEKGAVGLPGLP
GVPGTPGGPGLQGPLGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGDPGLPGPPG
PPGQVGEQKRPPETEIQRGDKGDPGLPGSRGDPGFPGPPGPSGGAKGEKGEAGEAGKRGK
PGKDGDPGTPGFPGSKGEPGLPGPPGRDGERGLKGDRGFPGPPGVVTGRQTGSTVGPKGE
AGYPGSPGIKGDRGPPGLTGPQGVPGIPGSGGGGQPGAPGFPGERGQKGDTGAPGLSLPG
PPGRPGSSGSPGSPGLPGPPGFSSGGQNCVAGEPGRPGLQGERGYPGENGQKGEKGDTCV
NCFGGTTGLPGQQGPPGQPGYPGAPGSTGAKGDRGFPGTPGTVGPPGSSGPPGASGFPGE
KGDPGDAVTVSGVRGEKGDTGFPGSPGLPGLEGRPGRDGIPGSPGPKGAPGALHGKGERG
SPGESGVPGIPGDRGPPGPPGFGPQGPSGEKGVQGVSGRPGSPGVPGAKGEPGLSVAEKG
SSGPRGQDGEPGLPGSPGSPGQPGQPGFPGIPGGKGEPGLPGIGLPGPPGGKGFPGIPGQ
PGNPGGSGRPGVDGLPGQPGLPGLKGEPGFGLPGPAGLPGVPGNKGFSGPKGDPGFPGTP
GSPGRYGFDGAPGAKGEPGTPGIPGARGPPGSPTIGSLGPPGPSGPPGPMGPPGFPGSNG
GKGDPGPPGLDIPGLPGERGSPGFPGSPGPVGTPGPPGGPGRDGLPGLQGLKGDMGPMGP
PGPSGGPGGPGGPGGPGQKGEAGFPGRDGLPGGSGVKGERGDPGVQGPPGASLPPSVTKG
TKGEPGLPGNPGLSGQKGVPGLSGDPGLPGSDGRPGLPGPSGLKGEPGIPGAPGGPGGPG
SKGNMGEMGFPGPSGQKGLSGQPGRNGAPGQPGGPGFPGAKGEPGSAGVGPPGLAGPKGE
PGQPGFPGSPGLKGGPGSPGLPGLPGGPGQKGDPGLPGFQGSPGIPGPKGLDGGPGAPGL
SGAPGRPGEPGRSGPPGLPGEKGQAGRDGIPGPAGIKGEPGLPGYGGPGAAGLPGLPGAK
GDPGLPGPSGTPGFPGTKGEAGFPGTPGPAGNPGPPGPLGQALQGPKGLQGPPGPPGRAG
PPGPQGVRGPAGSGGVKGEKGIPGAPGQPGFAGQKGDPGVPGFPGSPGLSGVPGIKGDIG
LPGVPGFPGSKGDSGIPGGNGLPGDPGDIGPSGPPGDPGVPPTPIVVKGERGPPGPQGQP
GSRGNPGGPGREGLPGQGGEPGEPGPEGPPGFSGPPGRKGDNGPAGQPGQRGYPGPPGSD
GPQGPPGITGSASASHGFLITRHSQGQDVPFCPDRTNLIYDGYSLLYVQGNERAHGQDLG
SAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIKPFISRC
AVCEAPAMVIAVHSQTIQIPTCPSNWEALWIGYSFMMHTSAGAEGSGQALASPGSCLEEF
RSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQSETLKAGNLRTRVSRCVVCMKR
T
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgaggaaagacttgagcctgcgacagctcgccgtccctctgctcttcttcacattgtgg
gtcgcggtgcagccatctgactccgcggcttgccatggatgtgttggatccaaatgtgac
tgcagtggagtgaaaggagccaagggagagcggggttttcccggtctgaccggacagcca
ggagtaccaggattccccggaccggaagggccgatcggacccagaggagagaagggcagt
gatggacctggtggaccaattggtccaaaaggaattagagggccttctggattaccagga
tttccaggaactccaggacttccaggtctgcccggacaagatggacctccagggccaaga
ggagtggctggttgcaacggtacaaagggtgagaggggttatccaggaacttcagggaac
cctggactgcagggagagctgggtcaacctggttttccgggacaaaagggagagccaggt
gatgtgatctcaacaaaccgctttggagagaaaggagccgtcgggttaccaggattacca
ggagttcctggaactcctggaggtcctggattgcaaggtccactcggcccccctggaccc
agaggctatgagggtcgtccaggtcctcctggtcctcccggaccaaagggaaacatggga
ttgaacttccaaggacccaaaggagagaagggtgatccaggtctgccaggacctcctggt
cctccgggccaagtcggagaacagaaaagaccgcctgagacggagattcaaagaggagac
aagggagacccaggacttccaggctcccgaggcgatccaggctttccaggacctcctggt
ccatcaggtggcgccaaaggagaaaagggagaagcaggagaagcaggcaaacgaggcaaa
ccaggaaaagatggtgaccccggtactccaggcttccctggaagcaaaggagaaccaggc
cttccaggtcctcctggcagggatggcgagagaggactaaaaggcgatcgtggattcccg
ggcccaccaggagtggtaactggaagacagacaggaagtacggttggtcctaaaggtgaa
gccgggtaccccggatcacctggaatcaaaggagacagaggaccaccaggtttaacagga
cctcaaggagtaccaggaattccaggttctggtggcggcggtcagccaggagcaccaggc
ttcccaggagagaggggtcagaagggagacacaggtgctcctgggttgtccctgccaggt
cctccagggcgtccagggtcaagtggttccccgggttcaccaggtctcccaggaccacca
gggttttcctcaggaggacagaactgtgttgctggagagccaggtcgtcctggtctccag
ggagagagaggatacccaggagagaacggccagaaaggtgagaagggtgacacttgtgtg
aactgctttggtggtaccactggtctccctggacaacaaggacctccaggacagcccgga
taccctggagctcctgggtcaacaggtgccaaaggggaccgaggatttccaggaacacct
ggtaccgttggccccccaggttcctctggtcccccgggggcctcaggattccctggagag
aagggtgatcctggtgatgccgtgacagtgagcggtgtcaggggagaaaagggagacacc
ggcttccccgggtcccccggtctgcccggtttggagggtcgtcccggtcgtgatggaata
ccaggttctccagggcccaaaggagctcctggcgctctacatggcaaaggagaacgaggg
tcccctggtgagtcaggtgttcctggcattccaggagataggggtcctccagggccccct
ggctttggacctcaggggccttcaggagagaaaggagttcagggtgtctcaggaagacct
ggatctccaggtgtacctggtgctaaaggggagccaggcctgtcagtggcagagaagggc
tcatcaggacccagaggacaggatggtgaaccaggactccctggctcaccaggtagtcca
ggtcagcctggacaacctggtttccctggtataccaggaggcaagggtgaacctggactc
ccaggtattggactccctggacccccaggtggtaaaggattcccaggtatccctggccag
ccgggaaatcctggaggatcaggaagaccaggagtagacggacttcccggccagccagga
ttgcctggactcaagggtgagcctggctttggtcttcccggccccgcaggtttaccagga
gtacctggaaacaaagggttctctggaccaaagggagatcctggtttccctggcacccca
ggatcacctggtcgatatggatttgatggtgctccgggggctaaaggtgagcccggaaca
cctggtatacctggagctcgtggtcctcctggatcccccaccatcggctcattggggccc
cctggtccatctggtccccctggcccaatgggaccaccaggattccctggatcaaatggt
ggaaagggagaccccggtccacctggactagacatcccaggtctgcctggagaaagagga
agtcctggtttcccaggttccccaggaccagttggaaccccaggacctcctggaggacct
ggtcgggatggcttgcctggactgcaaggtctgaaaggagacatgggtcccatgggacca
cctggaccttctggaggaccaggaggcccaggagggcccggtggccctggacagaaaggt
gaagctgggttcccaggaagagacggcttacctggtggttctggcgttaagggagagaga
ggtgaccctggtgtccagggacctccaggagccagcctgccaccatcggtcacaaaggga
accaaaggagagccaggattaccaggtaatccaggtctttcaggccaaaaaggtgttcct
ggtctctctggtgatcctggactgccaggatcagatggacgccctggactaccaggacca
tcaggtcttaagggagaacctggcatcccaggagcccctggcggtcctggagggccagga
tcaaaaggaaacatgggagaaatgggattcccagggccatcgggacagaagggtttatca
ggtcagccaggaagaaatggagcaccaggacaaccagggggaccgggtttccctggagcc
aaaggagaacctggctctgctggagttgggccacctggactagctggacccaagggtgaa
ccaggccagccaggattcccaggaagtccaggactgaaaggaggtccaggatcacccggt
ctcccaggtttaccaggaggaccaggccaaaaaggcgaccctggactgcctggattccaa
gggtctcctggtatccctggtccaaagggtctcgacggtggaccgggcgcccctggtctc
tcaggagcccctggtagaccaggagaacctggccgttcaggaccaccagggttgccagga
gagaaaggacaagcaggtcgtgatgggatcccaggaccagcaggaatcaaaggagagcca
gggcttcctggttatggtggacccggtgcagcagggcttccagggttgccaggtgcaaag
ggtgatccaggtcttcccggcccatctggcactcccggtttccctggcactaaaggagag
gctggtttccctggcactcctggccctgcaggtaacccaggccctcctgggcctttggga
caagctttgcaaggccccaaaggactccaaggtccacctggacctcctggaagagcaggt
ccacctggcccacagggtgtccgtgggcccgccggaagtggtggcgtgaaaggagaaaag
ggtattcctggcgctcctggccagccgggcttcgctggacagaaaggagatcctggtgtt
cctggattccctggttctcctggtctttctggtgttcctggaattaagggagatattggt
ctgcctggtgttccaggattccctggatcaaagggagattcaggaattcctggtggaaat
ggtcttcctggtgatcctggagatatcggaccaagtggccctcctggtgaccctggtgtc
cctccaactcccattgtggtgaagggagagcgcggacccccaggtccacagggccagcct
ggcagtcggggtaaccctggtggccccggccgcgagggtcttccaggtcagggtggtgaa
cctggagaacctggtccagaaggtcctcctggctttagtggcccacctggcaggaaggga
gacaacggacccgctggtcagcctggtcagcgtggttaccctggtccccctggttcagac
ggaccacagggtcctcctggtattacaggatcagcatctgcatcccatggattcctcatc
acccggcacagccagggtcaagacgtccccttctgtcccgacagaactaatctcatctac
gacggatactccctgctgtacgtgcagggaaatgagcgggcgcacggacaggaccttggc
tcggccggcagctgcctgcgcaggttcagcaccatgcccttcatgttctgcaacatcaac
aacgtctgcaactttgcctcccgcaacgactactcctactggctgtccacacccgagccc
atgcccatgtccatggccccgatcaccggagagagcatcaagcctttcatcagcagatgt
gcagtgtgtgaagctccagccatggtgatcgcagtccacagtcagaccatccagattccc
acttgcccttcaaattgggaagctctatggataggatattctttcatgatgcacactagc
gcgggtgcagagggctccggtcaggctctggcctcccccggctcctgtctggaggagttc
cgcagcgctcccttcatagagtgccacggcagagggacgtgcaactattatggcaactcc
tacagcttctggttagccactgtagagcccagtgagatgttcaggaagccccagtctgag
actctgaaggcgggtaacctacggacgcgcgtcagccgctgcgtagtctgcatgaagagg
acgtaa

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