Antennarius striatus (striated frogfish): 137590318
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Entry
137590318 CDS
T10427
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
astr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137590318 (col4a5)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137590318 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137590318
NCBI-ProteinID:
XP_068163962
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Position
23:complement(3851896..3885433)
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AA seq
1681 aa
AA seq
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MRKDLSLRQLAVPLLFFTLWVAVQPSDSAACHGCVGSKCDCSGVKGAKGERGFPGLTGQP
GVPGFPGPEGPIGPRGEKGSDGPGGPIGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGPR
GVAGCNGTKGERGYPGTSGNPGLQGELGQPGFPGQKGEPGDVISTNRFGEKGAVGLPGLP
GVPGTPGGPGLQGPLGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGDPGLPGPPG
PPGQVGEQKRPPETEIQRGDKGDPGLPGSRGDPGFPGPPGPSGGAKGEKGEAGEAGKRGK
PGKDGDPGTPGFPGSKGEPGLPGPPGRDGERGLKGDRGFPGPPGVVTGRQTGSTVGPKGE
AGYPGSPGIKGDRGPPGLTGPQGVPGIPGSGGGGQPGAPGFPGERGQKGDTGAPGLSLPG
PPGRPGSSGSPGSPGLPGPPGFSSGGQNCVAGEPGRPGLQGERGYPGENGQKGEKGDTCV
NCFGGTTGLPGQQGPPGQPGYPGAPGSTGAKGDRGFPGTPGTVGPPGSSGPPGASGFPGE
KGDPGDAVTVSGVRGEKGDTGFPGSPGLPGLEGRPGRDGIPGSPGPKGAPGALHGKGERG
SPGESGVPGIPGDRGPPGPPGFGPQGPSGEKGVQGVSGRPGSPGVPGAKGEPGLSVAEKG
SSGPRGQDGEPGLPGSPGSPGQPGQPGFPGIPGGKGEPGLPGIGLPGPPGGKGFPGIPGQ
PGNPGGSGRPGVDGLPGQPGLPGLKGEPGFGLPGPAGLPGVPGNKGFSGPKGDPGFPGTP
GSPGRYGFDGAPGAKGEPGTPGIPGARGPPGSPTIGSLGPPGPSGPPGPMGPPGFPGSNG
GKGDPGPPGLDIPGLPGERGSPGFPGSPGPVGTPGPPGGPGRDGLPGLQGLKGDMGPMGP
PGPSGGPGGPGGPGGPGQKGEAGFPGRDGLPGGSGVKGERGDPGVQGPPGASLPPSVTKG
TKGEPGLPGNPGLSGQKGVPGLSGDPGLPGSDGRPGLPGPSGLKGEPGIPGAPGGPGGPG
SKGNMGEMGFPGPSGQKGLSGQPGRNGAPGQPGGPGFPGAKGEPGSAGVGPPGLAGPKGE
PGQPGFPGSPGLKGGPGSPGLPGLPGGPGQKGDPGLPGFQGSPGIPGPKGLDGGPGAPGL
SGAPGRPGEPGRSGPPGLPGEKGQAGRDGIPGPAGIKGEPGLPGYGGPGAAGLPGLPGAK
GDPGLPGPSGTPGFPGTKGEAGFPGTPGPAGNPGPPGPLGQALQGPKGLQGPPGPPGRAG
PPGPQGVRGPAGSGGVKGEKGIPGAPGQPGFAGQKGDPGVPGFPGSPGLSGVPGIKGDIG
LPGVPGFPGSKGDSGIPGGNGLPGDPGDIGPSGPPGDPGVPPTPIVVKGERGPPGPQGQP
GSRGNPGGPGREGLPGQGGEPGEPGPEGPPGFSGPPGRKGDNGPAGQPGQRGYPGPPGSD
GPQGPPGITGSASASHGFLITRHSQGQDVPFCPDRTNLIYDGYSLLYVQGNERAHGQDLG
SAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIKPFISRC
AVCEAPAMVIAVHSQTIQIPTCPSNWEALWIGYSFMMHTSAGAEGSGQALASPGSCLEEF
RSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQSETLKAGNLRTRVSRCVVCMKR
T
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagacttgagcctgcgacagctcgccgtccctctgctcttcttcacattgtgg
gtcgcggtgcagccatctgactccgcggcttgccatggatgtgttggatccaaatgtgac
tgcagtggagtgaaaggagccaagggagagcggggttttcccggtctgaccggacagcca
ggagtaccaggattccccggaccggaagggccgatcggacccagaggagagaagggcagt
gatggacctggtggaccaattggtccaaaaggaattagagggccttctggattaccagga
tttccaggaactccaggacttccaggtctgcccggacaagatggacctccagggccaaga
ggagtggctggttgcaacggtacaaagggtgagaggggttatccaggaacttcagggaac
cctggactgcagggagagctgggtcaacctggttttccgggacaaaagggagagccaggt
gatgtgatctcaacaaaccgctttggagagaaaggagccgtcgggttaccaggattacca
ggagttcctggaactcctggaggtcctggattgcaaggtccactcggcccccctggaccc
agaggctatgagggtcgtccaggtcctcctggtcctcccggaccaaagggaaacatggga
ttgaacttccaaggacccaaaggagagaagggtgatccaggtctgccaggacctcctggt
cctccgggccaagtcggagaacagaaaagaccgcctgagacggagattcaaagaggagac
aagggagacccaggacttccaggctcccgaggcgatccaggctttccaggacctcctggt
ccatcaggtggcgccaaaggagaaaagggagaagcaggagaagcaggcaaacgaggcaaa
ccaggaaaagatggtgaccccggtactccaggcttccctggaagcaaaggagaaccaggc
cttccaggtcctcctggcagggatggcgagagaggactaaaaggcgatcgtggattcccg
ggcccaccaggagtggtaactggaagacagacaggaagtacggttggtcctaaaggtgaa
gccgggtaccccggatcacctggaatcaaaggagacagaggaccaccaggtttaacagga
cctcaaggagtaccaggaattccaggttctggtggcggcggtcagccaggagcaccaggc
ttcccaggagagaggggtcagaagggagacacaggtgctcctgggttgtccctgccaggt
cctccagggcgtccagggtcaagtggttccccgggttcaccaggtctcccaggaccacca
gggttttcctcaggaggacagaactgtgttgctggagagccaggtcgtcctggtctccag
ggagagagaggatacccaggagagaacggccagaaaggtgagaagggtgacacttgtgtg
aactgctttggtggtaccactggtctccctggacaacaaggacctccaggacagcccgga
taccctggagctcctgggtcaacaggtgccaaaggggaccgaggatttccaggaacacct
ggtaccgttggccccccaggttcctctggtcccccgggggcctcaggattccctggagag
aagggtgatcctggtgatgccgtgacagtgagcggtgtcaggggagaaaagggagacacc
ggcttccccgggtcccccggtctgcccggtttggagggtcgtcccggtcgtgatggaata
ccaggttctccagggcccaaaggagctcctggcgctctacatggcaaaggagaacgaggg
tcccctggtgagtcaggtgttcctggcattccaggagataggggtcctccagggccccct
ggctttggacctcaggggccttcaggagagaaaggagttcagggtgtctcaggaagacct
ggatctccaggtgtacctggtgctaaaggggagccaggcctgtcagtggcagagaagggc
tcatcaggacccagaggacaggatggtgaaccaggactccctggctcaccaggtagtcca
ggtcagcctggacaacctggtttccctggtataccaggaggcaagggtgaacctggactc
ccaggtattggactccctggacccccaggtggtaaaggattcccaggtatccctggccag
ccgggaaatcctggaggatcaggaagaccaggagtagacggacttcccggccagccagga
ttgcctggactcaagggtgagcctggctttggtcttcccggccccgcaggtttaccagga
gtacctggaaacaaagggttctctggaccaaagggagatcctggtttccctggcacccca
ggatcacctggtcgatatggatttgatggtgctccgggggctaaaggtgagcccggaaca
cctggtatacctggagctcgtggtcctcctggatcccccaccatcggctcattggggccc
cctggtccatctggtccccctggcccaatgggaccaccaggattccctggatcaaatggt
ggaaagggagaccccggtccacctggactagacatcccaggtctgcctggagaaagagga
agtcctggtttcccaggttccccaggaccagttggaaccccaggacctcctggaggacct
ggtcgggatggcttgcctggactgcaaggtctgaaaggagacatgggtcccatgggacca
cctggaccttctggaggaccaggaggcccaggagggcccggtggccctggacagaaaggt
gaagctgggttcccaggaagagacggcttacctggtggttctggcgttaagggagagaga
ggtgaccctggtgtccagggacctccaggagccagcctgccaccatcggtcacaaaggga
accaaaggagagccaggattaccaggtaatccaggtctttcaggccaaaaaggtgttcct
ggtctctctggtgatcctggactgccaggatcagatggacgccctggactaccaggacca
tcaggtcttaagggagaacctggcatcccaggagcccctggcggtcctggagggccagga
tcaaaaggaaacatgggagaaatgggattcccagggccatcgggacagaagggtttatca
ggtcagccaggaagaaatggagcaccaggacaaccagggggaccgggtttccctggagcc
aaaggagaacctggctctgctggagttgggccacctggactagctggacccaagggtgaa
ccaggccagccaggattcccaggaagtccaggactgaaaggaggtccaggatcacccggt
ctcccaggtttaccaggaggaccaggccaaaaaggcgaccctggactgcctggattccaa
gggtctcctggtatccctggtccaaagggtctcgacggtggaccgggcgcccctggtctc
tcaggagcccctggtagaccaggagaacctggccgttcaggaccaccagggttgccagga
gagaaaggacaagcaggtcgtgatgggatcccaggaccagcaggaatcaaaggagagcca
gggcttcctggttatggtggacccggtgcagcagggcttccagggttgccaggtgcaaag
ggtgatccaggtcttcccggcccatctggcactcccggtttccctggcactaaaggagag
gctggtttccctggcactcctggccctgcaggtaacccaggccctcctgggcctttggga
caagctttgcaaggccccaaaggactccaaggtccacctggacctcctggaagagcaggt
ccacctggcccacagggtgtccgtgggcccgccggaagtggtggcgtgaaaggagaaaag
ggtattcctggcgctcctggccagccgggcttcgctggacagaaaggagatcctggtgtt
cctggattccctggttctcctggtctttctggtgttcctggaattaagggagatattggt
ctgcctggtgttccaggattccctggatcaaagggagattcaggaattcctggtggaaat
ggtcttcctggtgatcctggagatatcggaccaagtggccctcctggtgaccctggtgtc
cctccaactcccattgtggtgaagggagagcgcggacccccaggtccacagggccagcct
ggcagtcggggtaaccctggtggccccggccgcgagggtcttccaggtcagggtggtgaa
cctggagaacctggtccagaaggtcctcctggctttagtggcccacctggcaggaaggga
gacaacggacccgctggtcagcctggtcagcgtggttaccctggtccccctggttcagac
ggaccacagggtcctcctggtattacaggatcagcatctgcatcccatggattcctcatc
acccggcacagccagggtcaagacgtccccttctgtcccgacagaactaatctcatctac
gacggatactccctgctgtacgtgcagggaaatgagcgggcgcacggacaggaccttggc
tcggccggcagctgcctgcgcaggttcagcaccatgcccttcatgttctgcaacatcaac
aacgtctgcaactttgcctcccgcaacgactactcctactggctgtccacacccgagccc
atgcccatgtccatggccccgatcaccggagagagcatcaagcctttcatcagcagatgt
gcagtgtgtgaagctccagccatggtgatcgcagtccacagtcagaccatccagattccc
acttgcccttcaaattgggaagctctatggataggatattctttcatgatgcacactagc
gcgggtgcagagggctccggtcaggctctggcctcccccggctcctgtctggaggagttc
cgcagcgctcccttcatagagtgccacggcagagggacgtgcaactattatggcaactcc
tacagcttctggttagccactgtagagcccagtgagatgttcaggaagccccagtctgag
actctgaaggcgggtaacctacggacgcgcgtcagccgctgcgtagtctgcatgaagagg
acgtaa
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