Antennarius striatus (striated frogfish): 137590879
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Entry
137590879 CDS
T10427
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03013
Nucleocytoplasmic transport
astr03015
mRNA surveillance pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137590879 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
137590879 (acin1b)
03015 mRNA surveillance pathway
137590879 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137590879 (acin1b)
03041 Spliceosome [BR:
astr03041
]
137590879 (acin1b)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137590879 (acin1b)
Spliceosome [BR:
astr03041
]
Complex C
Other components
EJC/TREX
137590879 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
137590879
NCBI-ProteinID:
XP_068164812
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All DBs
Position
23:1893733..1909398
Genome browser
AA seq
1209 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNALISRLKGALMLENLQRAPPSHS
GLQPNSQIGEEMSQNSFIQQYLAKQQELLRQRLEREAQQDEEADDSPAVQEEDEDLSEDN
DGSPYVHDKHRSIHSQPSMTKAADKRGDTVMGDGRMERGPDVDAGPPLHPQESLNAPGTM
MQRSIFHQGLKEPPAPSPPRAVASLSVRVLDQPNRQGLPPAIPPAQEKEGTAPSEPGSAH
PVLHLSRSARVFAGGHAQDDDEDDDEDDSDDEESEDDDDWGPGPGGARKGNKAPHQPQQM
PPSVPSTFARSRRKRQPPQHIPPPQVHHNPLQLRHPTPPPSPPPDLFPLPDTPKQSPPDS
NNREAEGGPGTAQGPRVVPFPPPTLQRQDSDSSSRSSSPEPPSKHRPGPLSLLIHKMESE
SADEASSAAAMSGATANSTAGPSCSSKSLKLEGNEKRDMEEVKRPKEENEREQRKMQEKE
KESRHPEEEKEDKRKHQEQEEKLHQKEEQEKERTLQERERHDKNKRKEVQLQEQKAQDSD
SSSDSDSKSDSSSNSSQSSSSSTGDKPRFAKKLKRSDEGQKVEEKKTDLPKGAEKQFLSK
REVSETNAATATEMEQDSESSVAEHPPSEAGPENECRLGESAIPKAFAARKISLSSSKVS
PAAVEVGGGGDGDAGNAAGRKRRWGSSASVTAKKPSISITTDSLKSLIPDIKVNQEAVVE
LHPEELQLSGDEENQDASRGDQDKGLKIRRTVTQVVQGDGQENGQTNEEEEGEKAEEEKQ
HRTSRDKRQNSVCEEAVETQPPVTQEGEAVKVTPNDSVVRRSISQQKSGVSITIDDPVHT
TRQPSPPHGKISNIIHVTNLVRPFTLGQLKELLNRTGQVVEEGFWIDKIKSHCYVTYTTT
EEAVATRAALHRVKWPQSNPKVLSVDFCEQDELDFHKGIIKPEKEKEHAAPPAGPQIRLP
PLMPEPERDRDRERDRERDRERDRDRDRDRERDRECDRGMGGVRDLWAEREREMQRRERA
RGEREWDRDKIREFARPGDDGRRSRSRDRERRRRERVKSKERKTEKKEKGDEPPAKLLDD
LFLKTKAAPCIYWLPHTEEQAAQRLLDRSERQKERERRHKEQKEEEVKKREEEKKERLKG
REKEDASAPSGGGAAAAAVRGAEGDRERGRDREGERKRDGGHRPRRPSEEAGGGGRRPRS
RSNPRDRRR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagttgcggat
ttgaaggccgccctggagcaaagaaacctcccaaagagtggacagaaaaatgctctaatc
agccgactgaagggggctctaatgctggaaaatctccagagggcacccccgtctcacagt
gggctgcagcccaactcacagattggtgaggagatgagccagaatagcttcattcagcaa
tacttggccaaacagcaggaactccttcgccagaggctggagagagaagcccagcaagat
gaagaggcagacgacagtccagcggtccaggaggaggatgaagacttgtcggaggacaat
gatggctccccttatgttcacgacaagcatcgctctatacactcccagccctcaatgact
aaggcggcggataaaagaggagatacagtgatgggtgatgggagaatggaacgtgggccc
gatgtggacgctggtcctcctcttcacccacaggagtcccttaatgctccaggaactatg
atgcagcgatccatctttcatcaaggactgaaggagccgcctgcaccctctcctccccgg
gcggtagcctccctgtcagtgcgtgttctggaccagcccaaccggcaggggcttcctccc
gccatacccccggcccaggagaaggaaggcactgcaccaagtgaaccaggctcagctcat
cccgttctccacctgagccgctctgccagagtcttcgcaggaggtcacgcgcaagacgac
gacgaagacgacgacgaagatgacagcgatgatgaggaaagcgaggatgatgacgactgg
gggcccggtcctggcggggcaagaaagggcaacaaagcacctcaccagccgcagcagatg
ccacccagcgtcccgtcgacgttcgcgagatccagacgcaagcgtcagcctccgcagcac
atcccgcccccgcaggttcaccacaacccgctgcagctgcgccaccccactcctcctccc
tctccaccccccgacttgtttccgctgcccgacacccccaaacagagcccaccagactcc
aacaaccgggaggcagagggcggccctgggacggcacaagggccgagggtggtgcctttc
ccacctcccactttgcagaggcaggactccgactccagctctcgctccagcagcccagag
cccccttcgaaacacagacccgggcctctttctctgctgatacacaagatggagtcagag
agtgcagatgaggcctcctctgctgcagcgatgtcaggagcgaccgcaaactccactgct
gggccttcctgttccagcaaatcccttaaactggagggaaatgagaagagagatatggaa
gaagtgaagcgacccaaggaggagaatgaaagagagcaaaggaagatgcaagaaaaagaa
aaagagagtcggcacccggaggaagagaaggaggacaagaggaaacaccaggaacaggag
gagaaactccaccagaaagaggagcaagaaaaagagcggacactccaggaaagggaacgt
catgacaagaacaagaggaaagaagtgcagctgcaagagcagaaagcccaagattcagat
tcttcttcagattctgactccaaatcagattcctcgtcaaattcatcccaatcatcttcc
tcgtccactggagataaaccccgctttgctaagaagctgaagaggtcagatgaagggcaa
aaagtagaagagaaaaagaccgacctgcccaaaggagcagagaaacaattcctctcaaaa
agagaagtgtctgagaccaacgcagccaccgctactgagatggaacaagactcagaaagc
tctgtggctgagcatccgccctccgaggccggtccggagaacgagtgtcggctgggggag
agcgccattccgaaggcttttgccgctcgcaagatctccctgagcagcagtaaagtctct
ccggctgctgtggaagtaggaggcgggggggatggagatgcaggaaacgcagcggggagg
aagaggcgatggggctccagcgcatcggtcactgcgaagaaaccatcgatcagcatcacc
accgactcgctgaagtcgttgatcccagacatcaaggtgaaccaggaggcggtggtggag
ttacacccagaggagctgcagctgtccggggacgaggagaaccaggacgccagccggggc
gaccaggataaaggcctgaagatccgacgcaccgtcacacaggtcgttcagggcgacggc
caggaaaacggacagacgaacgaagaggaagaaggagagaaagcggaggaagagaaacaa
cacaggacgtccagggacaagaggcagaacagcgtttgtgaggaagccgtggaaactcag
cctcctgtcacgcaggagggagaagcggtgaaagttaccccgaacgacagcgtggtgcgt
cgctccatcagccagcagaagtccggtgtttccatcaccatcgacgatcctgtccacaca
accaggcagccttcgcctcctcacggcaaaatctcaaacatcatccacgtgaccaacttg
gtccgacctttcactctgggtcagctcaaagagctgctgaacaggacgggccaggtggtg
gaagagggcttctggatcgacaagatcaagtcccactgctatgtcacgtacaccaccaca
gaggaggcggtcgccaccagagccgccctccatcgggtcaaatggccccagagcaacccc
aaggtcctcagtgtggacttctgcgagcaggacgagctggattttcacaagggcatcatc
aaaccggaaaaagaaaaggagcacgccgcccccccagctggtcctcagatccgactgccg
cctctgatgcccgaaccagaaagggatagagatagagagagggacagggaaagggaccgg
gaacgagaccgggacagagacagggacagggagcgagaccgagaatgtgaccgtggcatg
gggggagtccgggacctgtgggcggagcgggagagagagatgcagcgccgggaacgcgcc
cgaggcgagcgggagtgggatcgggataaaattcgcgaattcgcccgaccgggagacgac
ggacggcgatcccggtccagagacagggagcgcaggaggagggagagggtcaagagcaag
gagaggaagactgagaagaaagagaaaggagacgaacctccggccaaactgctcgacgac
ttgttcctgaagaccaaagcggctccgtgtatatactggcttccccacaccgaggagcag
gcggcgcagcggctcctggaccgctccgagcggcagaaagagcgcgagcgacggcacaag
gagcagaaggaggaggaagtcaagaagcgagaggaggagaagaaggagcggctgaagggg
cgggagaaggaggacgcgtcggcgccaagtggagggggggcggcggcggcggcggtacga
ggggccgaaggcgaccgggaacgcggccgagacagagagggggagaggaagagggacggc
ggccaccggcccagacgaccctccgaggaagccggcggcggaggacgccgccctcgtagc
cgtagcaaccccagggatagacgccgctga
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