Entry |
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Symbol |
pcdh7b
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Name |
(RefSeq) protocadherin-7b isoform X1
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KO |
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Organism |
astr Antennarius striatus (striated frogfish)
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Pathway |
astr03273 | Virion - Lassa virus and SFTS virus |
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Brite |
KEGG Orthology (KO) [BR:astr00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137590913 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:astr01009]
137590913 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:astr04515]
137590913 (pcdh7b)
Protein phosphatases and associated proteins [BR:astr01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137590913 (pcdh7b)
Cell adhesion molecules [BR:astr04515]
Cadherins
Protocadherins
137590913 (pcdh7b)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
23:complement(999862..1096599)
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AA seq |
1160 aa
MIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGT
LYLLPTATDRDFGRNGIERYELIQDNGENSRRLGSSGDPYSGKRRFDDGASRSSVFELQV
ADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRF
EKSVYEADLPENSSPGSPILQLKATDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLS
VLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDG
IANVAEDVVVDTPIALVQVSDKDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLH
TSAPLDYEATQEYNVVIVAVDSGSPSLTSNNSLIVKVGDTNDNPPIFSQNVVEVSFPENN
APGERVTTVTAIDADSGKNAEIAYSLDSSVSGIFSIDADSGDIRVNTILDREQTERYEFK
VIAKDKGINTLQGSATVVVLVADKNDNQPKFMQDVFTFYVKENLEPNSPVGMVTVIDADK
GQNAEMSLFVKEEEDIFSIENDTGTIFSTLSFDREQKTTYTFLVKAVDGGDPPRSATATV
SLFVMDENDNAPTVTFPINSSYTLLPPSSNIRTVVRTVIATDSDTGINADLNYSIIGGNP
FKLFEIDGGTGVISLVGKLEQKHYGLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTV
VEAQVAKSLSTSLNTNIAGDPNYDLSKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKN
KNGYEAGKKDHEDFFTPQQHDKSKKPKKDKRKQKSKQPLYSSIVTVEASKPNGQRYDGVN
EKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPAN
TFVGTGDNISLGSDHCSEYSSQTINKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGL
DESETPSSKSSSGPRLGALPLPEDSYERTTPDGSVGEAEHMENDARPLPDVAMTGKCTRE
CDEYGHSDSCWMPVRTSPERRPSKSTTTPQQPKLSTFMSGNGSGSSSADQPGSQETLAMA
AMANGDPTAAHMMGDRNRNLLNKKMASSSSNYDAFGSPSYDSPGSGEEVLGHPTEEIPLA
PTGEYKPTSCGTLTRREVYL |
NT seq |
3483 nt +upstreamnt +downstreamnt
atgatatttgatgagaatgagtgcttcatcgattttgaagtgtcagtgatcggaccggct
cagagctgggtcgacctgttcgaggggaaagtcatcatattagatataaacgataacacc
ccgtccttcccttcccctgtcctgacactgtctgtggaggagaacagacccattggaacc
ctttatctgctgcccacagccacagacagagattttggtagaaatggaatagagagatac
gagctcatccaagacaacggggagaactcgaggcgcctgggctcttctggggatccgtac
tccgggaagaggaggtttgacgacggtgcgagcaggagcagcgtctttgaactgcaagtt
gctgacaccaccgatggggagaagcagcctcagctcatcattaagggggccctcgatcgg
gagcagagagactcctacgagctcaccctgcgagtcagggacggaggtgacccccctcgc
tcttcgcaggccatcctcagggtgatgatcaccgacgtgaacgacaacaacccacgcttc
gagaagagcgtctacgaggccgatctaccggaaaacagctcgcccggttcccccatcctg
cagctcaaagcgacggatgctgacgtcggggtcaacggtcaaatcgagtacgtgttcggg
gcggccacggagtcggtacggaggctgctgaggttggatgagagcacagggtggctgagt
gtcttgcaccgcatcgaccgtgaagaagtcagccagctgaggttcacagtaatggcccgt
gaccgaggccagccgcccaaaatggacaaggccaccgtggtgttgaacatcaaggatgag
aacgacaacgttcccgccatcgagatacgcaagattggacgcattttcttgaaagatggg
attgccaacgtggcggaggatgtcgtggtggacacgcccatcgctttagttcaggtgtca
gataaagaccagggggaaaatgggattgtgacctgcacggtggtgggggatgttcccttc
cagctcaaaccagccagcgagatggagggcgagcagaataaaaagaaatatttcctccat
acatctgccccgctggattacgaggccacacaggaatacaacgtggtcatagtggctgtg
gattctggaagccccagtctgaccagtaataactctctgattgtcaaagtgggagacacg
aacgataaccctcccatcttcagccagaacgtcgtggaggtgtcgtttccggaaaacaac
gcccctggcgagagggtgacgacagtgacggccatcgacgcagatagtgggaagaacgct
gagatcgcttattccctcgattcgtccgtgagtgggattttctccatcgacgccgacagt
ggagacatacgagtgaacaccattctggatagagagcaaacggagcgctacgagttcaaa
gtgatcgccaaagataagggcatcaacacccttcagggctcggcgacggtggtcgtcctg
gtggccgataagaatgacaaccaaccaaagttcatgcaggatgtgttcaccttctacgtc
aaggagaacctggagccaaacagcccggttggaatggtgacggtcatcgacgccgataaa
ggccagaacgcggagatgagtctcttcgtgaaggaagaggaggacattttctcaatcgaa
aacgacaccgggactattttctccactctgtcgttcgatcgggagcagaaaacgacgtac
acgttcctggtcaaagccgtggacgggggtgaccctcctagatccgccaccgccacggtt
tcccttttcgtcatggatgaaaacgacaacgccccaaccgtcacattcccaattaacagc
tcctacaccctcctcccaccctccagtaacatcagaacggtggtcagaaccgtcatcgcc
accgattcagacaccggcatcaacgcagacctgaactacagcatcattggggggaatccc
ttcaagttgtttgagatcgatgggggtacgggggtcatttcactggtggggaagctggag
cagaagcattacggcctccacagactggtggtgcaggtgaacgatagtggccagccttcc
cagagcaccaccaccctggtgcacgtgtatgttaatgagacgctctccaattccacagtg
gtggaggcccaggtggctaagagccttagcacgtctctcaacaccaacattgccggcgac
cccaactacgatctcagcaaacagaggctcagcattgtaatcggagtagtttcgggcatc
atgacagtcatcctcatcattctggtggtcgttatggcccgctactgccgccccaagaac
aagaacggctacgaagctggcaagaaggaccacgaggacttcttcaccccgcagcagcac
gataagtccaagaagcccaaaaaggataagaggaaacagaagtccaagcagccgctctac
agcagcatcgtcaccgtggaggcctccaaacccaacgggcaacgctacgacggcgtcaac
gagaagctgtcggacagtcccgggatgggccgctaccgctccgtcaacggtgggccgggc
agcccggatctggcccgacactacaagtccagttcgcctcttcccacagtgcagcttcac
cctcaatcgcccacggctggtaaaaagcaccaggcagttcaggacctgccccctgccaac
accttcgttggcaccggagataacatttcccttggatctgaccactgctctgaatacagc
agtcaaaccatcaacaagtacaacaaacagccgtttcgccgagtgaccttctctgtggtg
agccagccccaggaccctcaccagcagggatcgctgcagagctgctacgacagcggtctg
gatgagtcggagacgcccagcagcaagagctcgtcaggcccccggctgggcgcccttccc
cttcctgaggacagctacgagaggacaacgccggatggcagtgtcggtgaggcagagcac
atggaaaatgacgcccggccgttgcctgacgtagccatgactggcaagtgcacccgggaa
tgtgacgagtacggccactcggactcctgctggatgcctgtgcgcacgtcgcccgagcga
cggccttccaagtccaccaccactccacaacaaccaaagctttccactttcatgagcggc
aacggcagcggcagcagcagcgcagaccagcccggcagccaagagaccctcgccatggcc
gccatggccaacggagacccaacggctgctcacatgatgggcgaccgcaaccgtaacctt
ctgaacaagaagatggcttcctcctcctccaactacgatgccttcggatcaccttcttac
gactcgccgggaagcggggaggaggtgctgggtcaccccactgaggagatccctcttgca
cctactggggagtacaaacccacttcctgtggtactctgacacggcgagaggtctacctg
tga |