Antennarius striatus (striated frogfish): 137591299
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Entry
137591299 CDS
T10427
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04140
Autophagy - animal
astr04148
Efferocytosis
astr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137591299 (vps16)
04148 Efferocytosis
137591299 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137591299 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137591299 (vps16)
Membrane trafficking [BR:
astr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137591299 (vps16)
Hops complex
137591299 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
137591299
NCBI-ProteinID:
XP_068165309
LinkDB
All DBs
Position
24:complement(8631904..8638098)
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AA seq
834 aa
AA seq
DB search
MAFITATWNPLGEAFYRKTELYEMHWTMKDALRDCLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVAVTSFPWKSGPVVHLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELYILDNTSCTAVFPPGLSPQSGGIVHMCVSFSYKYLALFTDTGQL
WTGTSNLQEKLSEVDTNMLTPPKQMVWCRRPKSQQPSVVLLWDRLLMVAGVCCDTIQFPV
EDQCVLVGELDGVRVISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNIQKSLLRAASFGKCFLTDFSPDPFVTICR
ELRVLNAIRDSSVGLPLTHTQFKHMTLQVLIDRLVYRQFYPLAMEICRYLKIPEYQGISR
VLKHWASCKVQQKDLSDEAIARAVCLKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSHLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQDTLKDLYNQDDDHQELANYYVAASYREQRLESRLSVLQTAVDEYNKAKNE
FAAKATEDEMRLLRLQRKLDDEKGAGLLGLSLQETMEALLALGLHKQTDQLYRDFRVPDK
RYWWLKLKSLAEREDWEELEKFSKSKKSPIGYLPFVEVCTKRNNKYEAKKYIPKVAPEQK
VRAHLAVSDLEGAADAAIERKNDSEMGAVLSRCSASDRLLIDRLNRARASAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcattaccgccacttggaacccgctgggagaagctttttaccggaagacggag
ctgtatgaaatgcactggacgatgaaggacgcactgagagactgtctggtggctgcagcg
ccctatggaggaccaatagctctcctcagagaacctcaccgacgttctcccagctctcgc
cctcagctggagatctactcagcatctggagttgccgtcaccagtttcccgtggaaaagt
ggtcctgtggtccacttgggctggacggtctctgacgagctgctgtgcatccaggaagac
ggctcagttctgatctacgacctgtttggatccttcaagagacacttcagtatgggccag
gaagtggtccagagtcaagtattggaagccaaagtgtttcactctccatatgggactggt
gttgccatagtaactggctcctcccgcttcaccctagcaaccaatattgacgatctgaag
ctgcggcggttacctgaagtaccaggtctgcagggaaagccgtcctgctgggtcgtgctc
actcaggacagacagactaaagttctcctgtccaacgggcctgagctctacatcctggac
aacacgtcctgcactgctgtgtttcctccaggtttgagtcctcagagcggcggtatcgtc
cacatgtgtgtgtcgttcagctataagtacttggcgctcttcactgacaccggtcagctc
tggaccggcacctccaacctccaggagaagctgagtgaagtggacaccaacatgttgaca
cctcccaaacagatggtctggtgtcgcaggccaaagagtcagcagccgtctgtggtgctg
ctgtgggacagactcctcatggtggccggggtctgctgcgacaccatccagttccccgtg
gaggatcagtgtgtattggttggagaactcgatggcgtacgcgtcattagctcgaccaat
caagagcttctccaggaggttcctctggtctgtcaagacatctttaagattgcctccatg
gcgcctggagctctgctgctggaggcccaccgggagtacgagaagtctagtcagaaggct
gacgagtacctcagggagattaaggagcaaagcatgctgggagaggctgtcagacaatgt
gtggaggcggcaggacatgaatatgacaccaacatccagaagtctctcctgagggcggca
tcgtttgggaagtgcttcctgacagacttcagtcctgatccgttcgtgaccatctgcaga
gaattgcgtgttctgaacgccatcagagacagcagcgtgggacttcctctgacacacaca
caattcaaacacatgactctacaggtgctgatcgacaggttggtctatcgacagttttat
cctttagcgatggagatctgtcgttacctgaagattccagaatatcaggggatcagcaga
gttctcaaacactgggcctcatgcaaggtgcaacagaaggacctatcagacgaggccatt
gcccgagcggtgtgcctgaaggttggagattcacccggagtttcatattcacacatcgct
gctaaagcttacgaatgtggacgcactgagctcgccatcaagctgctagatttcgaggct
cgctctggagaacaggttcctctgctgctgaagatgaagagaagtcacctggccctcagc
aaggccgtggagagcggagacacagacctcgtttacacagttgtgacttacttgaagaac
gaaatgaaccgtggggatttcttcatgacgctgaggaaccagccggtggccctcagcctg
tacagacagttctgtaagctgcaggagcaggacaccctgaaggacctttataaccaggac
gatgaccaccaggagctcgctaactactacgttgctgccagttacagagagcagaggtta
gagagccgactgtcggtgctgcagacggcggtggacgagtacaacaaggctaagaacgag
tttgctgcaaaggccacagaagatgagatgcgtctccttcgtttgcaacgaaaactggat
gatgagaaaggggcggggctactgggcctgtctctacaggagacaatggaggcccttctg
gcattaggcctccacaagcaaactgatcaactgtacagagacttcagagttcctgacaaa
aggtattggtggttgaagctgaagtctctggcggagagagaagactgggaggagctagag
aagttctcaaagagcaagaagtctcctattggctacctgccgtttgttgaagtttgcaca
aagagaaacaacaagtacgaagccaagaagtacatccccaaggtggcgcccgagcagaag
gtcagagctcacctggccgtcagcgacctggagggggcggctgacgctgcgatcgaacgc
aagaacgactcagagatgggggcggtcctgtccaggtgctccgcctccgatcgtcttttg
attgacaggttgaaccgggccagagcctcagctgccaaaaagtga
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