Antennarius striatus (striated frogfish): 137592039
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Entry
137592039 CDS
T10427
Symbol
vps13a
Name
(RefSeq) intermembrane lipid transfer protein VPS13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137592039 (vps13a)
Membrane trafficking [BR:
astr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
137592039 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
137592039
NCBI-ProteinID:
XP_068165987
LinkDB
All DBs
Position
3:17556887..17595760
Genome browser
AA seq
3271 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDVVLRNLEIKENALSELDIPFKVRAG
HIERLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEERQLQEARQRELQRIEE
TKLKAAEQENPSLEKQDTFVEKLVTQVIKNVQVKISNIHVRYEDDVTNPNCPLSFGVSLK
ELSLQTADENWNPSLLDENSRLFFKLVQLDSLFAYWNVNSVLFSNFSADQALQYLQSSME
IQNSISVNYDFIFRPISADAKLRMNPRSDIDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYKPAVHVSSNAHKWWMYVITAVLEVDVKPRLQMWSWQHIRRHRQ
MVKRYRELYKSKITSKKPSDELLKALQEPEKTLDIFNITLARQQAEVEASKAGLVIYRPG
LKMEEEQSQGWMSWIWNWGEEPETKPKDVKTGGFDELLTPAEKSKLYTAIGYSDTPTNPN
LPKDFEDMKVNFHMERLSLSIKNKNENEIIKLTVGELKSTLTQRPGAQAIKVTAELSLFE
VTGLAINRPAPTVLSSRKAATGAGTPLLCILFETNPLDESADQRLHAESQPLEIIYDAAT
VNSMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLLYVIETQKILDLNLNLKASYVI
VPQTGFYDGTQNILLLDLGHFKMSSLSRKDLPQLSVISSNIEDIMSRAYDSFDVQLSSLQ
FLYSKPDVDWKMARKQKQSPLHILEPVDLKVLFSRAMVVKDSRMAKYKMSAKLPLLSLRI
SDVKLRSVLELVDSIPLPESKRSPHNTASAVTTKPRPSFTPQLTPRKPLNIIDNRSSLIF
ESCESISASSLGSQEDLFYDAPSSPIGDKPFFPDNPMPLHYADLSKKRSVFQDESTKNMT
DFVMNFEITEFSVQLCRLSEGQEVTLLFLDIEGLGTELKLRTFDMTSNTYLREICLKCPE
YMDSEDKPVQLITTLDNRELDLLTLEYIKADKNGPEFKSQHNSTEQLIKVTVSSLDVHLH
TEALLNTMTFLNNLLPPSTKKEGGVEELPAIPEEDAETEKKGEAIVPKKKSSKNSKFADV
VNWHVRADLRCLKVFIRGQKARISEISIEGLVSEVLMMKEEMQVLANLKNIVILDCDKDA
LYQKAVSIADKEVFDFRMINHTNATQGDGYLDMSQVDMSVTLTVGCIQVIFLNKFVSSIL
TFINNFQEAKEALAEVTVQAAEKAASGVKELAERSTRIALNVHFNAPIIFLPQSSSSSNV
IVADLGLLSVKNRFAKQPFKNDANIPPVVDIMTVKLTDLKMYRTTYINGDFQGEIELLKP
VSLNLEVDRNLSSNWYHDIPDIEISAHLMPLSLLLSQDDMTVVLRTLNENLSEKSEAVPS
PPPPTTDVSDSISNKESQGSGTTGPASSNTVVTAAVVETQINGNLKNTLKLDFKFDSMTL
VLYSPNENVLQLLDSHDEQLKLAEFTLGTISTAINMFSDSTMKASVRLATCFLDDKRPRI
QMVTSRMIAMRPGAEQSMMVEMNYRQGHDGTTLDTVVKDVYLCASMEFLLTVADVFLKAT
EQGFAQVPQTKSNSGGGDKKNNNASITVSEPTTTTAVLSKTEMNITVCNPEIVFVADLTR
ADASALVMTTECELVMKSGANGSQMIAIIRDLKVVACPFLPEKRINSVATVLQPCEVFFR
STQSPTSPQAMEVTINMLTLKVSPIIINTVITIQSALTPAAGTPEEIDSPVPVDLWKERG
WKELKLWFLEENEDEDTKSLVPLIPKGESLQVCINSMCLTLEAGVGHHTIPMLLAKSSFQ
GNVTNWSTLINLHSLLKLEVHYYNEVLGVWEPLLEPLEEEFKDGFRPWTLELKMKKKPLK
YTGLSDEVDCKIPDYKTVITVSSKDQLNITLSKCGLTMLNNLGTAFAVAAKQTAEFFQKD
SAPFVVKNRLGLPVSVRYSEMFRLVDHSTSDFTVTLQDGQALGMDYNTSVESDQFSAMTS
LSGKDYYIQPTPMGHTSTSVIPLIKVGRGMYSVMHNDSGVTRFLVCQIYSVEGSKYIKIR
SPFQIINHFSIPFKVMEGSTCLGTSLPTEEFCVPLDSYRSELSLLPITEENADDQDQEFD
SSEGFSYEEFSNQQLETHLQQTCRHRRNEDRVLMVNIVPVKDAVSFTHTGDVGDNFDVPF
VLHLWPSILLRNLLPYPISYKLKDSRVSDPDTILEPGHSAQLHSAVVNQSSLELCLLNYL
AQDWSAEYSVRSDQEEITFIVFQSLREDDEDGLEGTERKRAELDIALHVKSEVGQMVMAI
HSPYWMVNKTRRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISDSELSDE
FSLDTVGSHGDVRCKGRYKDYLVGVKIDPSSFSLTRIVTFVPFYTLVNRTKHTMLVCEEG
LDNWTEALPEQSAIPFWPENDTKRLMIKVDGCLLPPRTIDFTRPENCLLLRMDNPVSGVI
LDVNLSEHSATIRFSEYLDGTAPFLIINHTKDQTLLFHQSALTESTWVPDEVLDLSFSLE
EDSTQKLTEQEELEAGKAVHYTWAEPTGSRELCWNCGTYSGKLKSEEDLRENLNNEGKLF
VISFYEGLQRVVLFTEERRIFKLLCESEKAQLAEQEIILSLQNVGVSLVNNSSSQEVSYI
GITSSDVVWEIKPKKKGRWKTLSTKDTEMLEKSFKVYIESGPVDNTIVDLENNYQVSFTP
NGIDMRMLQPLNAPLRRHFLPGVKVEYSISPRQRAYRVQIHRIQIQNQLPGAIFPFVFYP
VKLPKSITMDSEPKPLTDISIVTRTAGHSDITRIKYFKVLIQEMDLKVDFGFLNAIMDLF
TLENASIMTSGQEVELFEKDIEHMKTELNDGSAADNSPISLYEYFHISPIKLHLSFSLST
GGEDGMKEKRQTEIIPVQSLNLLLKSIGATLTDAQDVVFKLAFFELNFQFCTTQQLQWEV
IRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMAL
GVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRRETMNRQPSGLKEGLTRGG
KGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAIARPTGGIIDMASSTFQGI
KRAAETSQDIESLRPPRFIHEDGVIRPYKEKEGFGSQMLQKIENGRFSRHRYFAHAMVND
SDLLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVENRRLRIEAKERVKSVFHAK
EFGKIINFKNPEIATWVLAKLEDAREILPKY
NT seq
9816 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagtctcgtggtggatgtactcaaccggtttttaggggactacgttgtc
aacctcgacagctcgcagctaaaacttggcatatggggaggtgatgttgttctgagaaat
cttgaaataaaggaaaatgccttgagtgaacttgacattcctttcaaagtgagagccggt
catatagaacggttggagctaaaaattccttggaagaacctctacacccagtcagtagaa
gcaacactggatggcgtttatttactcatagtccccacagcaagtataaaatatgatgca
gaaaaggaagagcggcagctccaagaggcccgtcagagggagctacagcggatagaggag
acaaaactgaaggctgctgagcaagagaaccccagtctggaaaagcaggacacctttgtg
gagaagcttgtcactcaggtcatcaaaaacgtacaggtcaagatctctaacattcacgta
cgctatgaagatgatgtcacaaatccaaactgtcctttgtcttttggagtgtcacttaaa
gaactcagtcttcagacagctgatgaaaactggaatccaagtctgttggatgagaattcc
aggcttttcttcaaattggttcaacttgacagtttatttgcctactggaatgtcaactca
gtactcttctccaatttcagtgctgatcaggctctgcaatatcttcagagcagcatggaa
atccaaaactctatttctgtcaactatgatttcatttttcgtcccatctctgctgatgct
aaactgcgaatgaatcccaggtcagatattgacttctcatctcccaaagtggatctaatg
gtcaatctcagtgaggtggcaattgaactcaacagaccccagtatattagcatcttggag
ttgttgggctctgtggatatgatgtcacgcaatctgccatacaggaaatacaaacctgcg
gtccacgttagcagtaatgcccataaatggtggatgtatgtaatcacggccgtcctggag
gtggacgtgaagcctcgtcttcagatgtggtcatggcagcacattcgccgccaccggcag
atggttaaacgctacagagagctctacaaatccaaaatcaccagcaagaaacctagcgat
gagctcctcaaggcactgcaggagccagagaagaccttggatattttcaacatcacattg
gccagacagcaggctgaggtggaggcaagcaaggcaggcctggtcatatatcgtccaggt
ttgaagatggaggaggagcagtctcagggatggatgagctggatttggaattggggagaa
gagcctgaaacaaaaccaaaagatgttaaaactggagggtttgatgagctgttaacccct
gctgagaagtctaagctttacactgccattggatacagcgacactcctactaaccccaac
ctgccaaaagattttgaagacatgaaggtaaatttccacatggagaggctgtctttgtcc
atcaaaaacaagaatgaaaatgagatcatcaaactgaccgttggagagctcaaatccacc
ctaacacagaggcccggagcacaagccatcaaagtcacagccgagctcagtttgtttgaa
gtcactggcctggccattaaccggcctgcaccaaccgttctgtcatcacgaaaggcagcc
acaggagcagggaccccactgctctgcatcctgtttgagaccaacccactggatgagagt
gctgaccagcggcttcatgcggaatcacagcccttagaaatcatctatgatgctgcaaca
gtaaacagcatgtcagcattcttcatgcctcctgatgacctgcagctagatgagctcacc
aatgccaccctcatgaaactggagcagtttagagatcgcacagccactggtctactgtac
gtcatcgaaacacaaaagattctggacctgaatttgaacttgaaggcctcctatgtcatc
gttccacaaactggcttttatgatgggacacagaacatcttactgttggatcttggacat
ttcaagatgtccagtctaagtaggaaagatctgcctcagctgtcagtgatctctagcaac
attgaagacatcatgtccagagcgtacgacagcttcgatgttcagctcagcagcctgcag
ttcctttacagcaaaccagatgttgactggaaaatggcccgtaaacagaaacagtcacca
ctccacatcctagagccagttgacctaaaagttcttttcagcagggcaatggttgtcaaa
gactctcgcatggccaagtataagatgtctgcaaagcttcctctgctgtctctgcgtatt
tctgatgttaaactccgaagtgtactggagctggttgacagtatcccactgcctgagagc
aaacgttctccacacaacactgcttcggctgttacaacaaaaccaaggccatctttcacc
ccacagctcactcccagaaaacctttgaacataattgacaaccgctcctcacttatattt
gagtcgtgtgaatccatcagtgcgtcctcattggggtcgcaggaagatttattctatgat
gctcctagttctcccattggtgataaacccttcttcccagataatcccatgccactgcat
tatgcagacttgagcaaaaaaagaagtgttttccaggatgaatcaacgaagaatatgact
gactttgtcatgaactttgaaatcactgagttttctgttcagttgtgtcgtctgtctgaa
ggtcaggaggtaacactgctcttcttggacatagagggtctgggcacagaactgaaacta
cgcacctttgacatgacatctaatacttatctgcgagagatctgtctcaaatgccctgaa
tacatggattctgaggacaagccggttcagctgatcaccactctggacaatagagagctt
gaccttcttaccctggagtacattaaagctgataagaatggaccagagttcaagtcgcaa
cacaacagtacagaacaactcataaaggtgactgtctcatccctggatgtgcatctccac
acggaggctctccttaacaccatgaccttcctcaacaacctgcttcctccatcaactaag
aaggagggaggggtagaggagctccctgccatccctgaggaagatgcagaaacggagaag
aagggagaagccattgtacccaagaaaaaaagctcaaagaattcaaagtttgcagatgtg
gtcaattggcacgtcagagctgatctccgctgtctgaaggttttcattcgaggacagaaa
gccaggatctcagagatcagtattgaaggtctggtttctgaggttttgatgatgaaagag
gagatgcaggttctggccaacttgaagaacatcgtgatattagattgcgacaaagatgct
ctttatcagaaggctgtatctatagcagataaggaggtgtttgacttccgtatgataaac
cacacaaatgcgacacagggtgatggctatctggacatgtctcaagttgacatgtctgtc
acacttactgttggatgcatccaggtcatcttcctcaacaagtttgtctcctcgatactg
acatttattaataacttccaggaggctaaggaggctctggctgaggtgacagttcaggct
gcagaaaaggctgcatcaggcgtgaaggagctggcagaacggagcactcggatcgctctg
aacgtccacttcaatgcacctataattttcttgccacagtcttcctcttcctccaatgtg
attgtagctgatctcggtctcctatctgtgaagaaccgctttgccaagcagccttttaaa
aacgatgctaatatcccacctgttgttgatataatgactgtaaaactgactgaccttaag
atgtacaggacaacatatataaacggagactttcaaggagagatagagcttttgaaacct
gtcagtctgaacttagaagttgatagaaatctatcctccaactggtaccatgacatacct
gacatagaaatttctgctcatctgatgcctttgagtctgctcctcagccaggatgacatg
accgttgtccttagaactctgaatgagaacctgtcagagaaatcagaagctgttccatct
ccacctcctccaactacggacgtctctgactctatatcaaacaaagagtcacaaggctca
ggaaccacaggaccagccagtagtaacacagttgtgacggctgctgttgttgagacccag
ataaacggcaatctgaagaatacacttaagctggacttcaaatttgactcaatgacgctg
gtcctgtacagcccaaatgagaatgtgctacagcttttggattcacatgatgagcaactt
aagctggcagagttcactctgggcaccatctccaccgccatcaacatgttttctgacagc
accatgaaggcctctgttcgactggctacctgttttctggatgacaaaagacccagaatt
caaatggttacctcaagaatgatagcaatgcgtcctggcgcagagcaaagtatgatggtt
gagatgaactaccgtcagggccatgatggcaccactttggacacagtggtaaaggatgtg
tacctgtgtgccagcatggagttcctcctcacagtggcagatgtcttcctcaaggctacc
gagcagggttttgctcaagttcctcaaacgaagagcaattctggagggggagataaaaag
aacaacaatgcctcaatcacagtgtctgagcccacaacaactacagccgtactatcaaag
acagagatgaacatcacggtgtgtaatccagagattgtgtttgtggctgacctgacacgg
gctgatgcttcagctctggtgatgaccacagaatgtgaactagtgatgaagagcggtgca
aatggatcacagatgattgctattatcagagacctcaaggtggtggcttgccccttcttg
ccggagaagaggataaacagtgtggccacagtgctacagccatgtgaggtgtttttcagg
agtactcagtcaccaacatcccctcaagctatggaagttaccataaacatgctcacactg
aaggtatctccaatcatcatcaacacagtgatcaccatccaatcggcattgactccagca
gcaggaacccctgaggaaatagatagccccgttccggtggacctgtggaaggaacggggc
tggaaggagctgaagctctggttcctagaagagaatgaggatgaagacacaaaatcactg
gtccctctgataccaaagggggaatccttgcaggtgtgcatcaattcaatgtgtctgact
ttagaggctggagttggacaccacacaattcccatgcttctggccaagtcctcattccag
ggaaatgtgacaaactggtccacacttattaacttacacagcctgctaaaactggaggtt
cactattacaatgaggtcttgggagtgtgggaaccactattggagcccttagaagaagag
tttaaagacggtttcagaccatggacattagaactgaagatgaagaagaagcccttgaag
tacacaggtttgtcagatgaagtggactgcaagatcccggactataagacagtcatcacc
gtcagtagtaaagaccagctgaacatcaccctctccaaatgtggactgaccatgctgaat
aacctaggcacagcttttgcagtggctgccaaacagactgctgaattctttcagaaggat
tcagctccatttgtagtgaaaaaccgccttggcctgccggtctccgtccgctacagtgag
atgtttcgtcttgttgaccattcaacatccgacttcactgtgacactgcaggatgggcaa
gccctcgggatggactataatacatcagtagaatctgaccagttctcagcaatgacttcg
ttaagtggaaaggactactacatacaacctactccaatgggccacacctcaaccagtgta
attcccctgatcaaggtgggcaggggaatgtacagtgtcatgcataatgactccggagtc
actcgttttctggtctgtcagatttattctgtggaaggcagcaagtacatcaagatccgc
tcacctttccagatcatcaatcatttttcaatccctttcaaagttatggaaggatcaact
tgtctgggtacatctttgcccactgaggagttctgtgtgcctctggactcatataggtct
gagctgagccttctgccaattacagaagagaatgctgatgatcaagatcaagagttcgac
tcctcagagggcttcagttatgaagagtttagcaaccagcagttggaaacacacctccag
cagacctgtcgtcatcgtaggaatgaggatagagtgctgatggtcaacattgtgccagtg
aaagatgctgtgtcattcacacacactggagatgtgggggataactttgatgtgcccttt
gtgcttcacctgtggccgtccatcctgttacgcaacctgcttccttaccccatctcctac
aaactaaaggacagtagagtctctgaccctgataccattctggaaccaggccactcagcc
cagcttcactctgcagttgtgaaccaatcaagtcttgagctttgcctactgaactacttg
gctcaggactggtctgctgagtatagtgttcgcagcgaccaggaagagatcacctttata
gtgtttcagtctctacgagaggatgacgaagatggtcttgaagggacagagaggaagagg
gctgagttggacatagcattgcatgttaaatctgaggtgggacaaatggtgatggctatc
cattctccatactggatggtgaacaagacacgtaggttgttgcagtacaaggctgatgat
atccaccgcaaacaccccctggactacgacatgcccctcttgttctccttcaagcctcgt
tatttcctgaagaacaataaggttcgtcttatgatctcagacagtgaactctctgatgag
ttctccttggataccgttggcagccatggagatgtcagatgtaaaggccgttacaaagac
taccttgttggcgtgaagatcgatccaagcagtttcagtctgacccgcattgtgactttt
gtaccgttttatacactggtcaaccgaaccaaacacaccatgttagtatgtgaagagggg
ctggacaactggactgaggctctgccagaacagtcagcaattcccttctggcctgaaaac
gataccaagcggctaatgatcaaagtagacggttgtcttttgcctcctcggactattgac
ttcacacggccagaaaactgcttattgctgcgtatggacaaccctgtgagtggggtaatt
ctagatgttaacctgtcagaacattctgccacaattcgattctctgaataccttgacggc
acagcccccttccttattatcaaccacaccaaagaccagactctgctgttccatcagagt
gccctgacagaatccacgtgggtgcctgatgaagtcctcgacctctccttctcattggag
gaggacagcactcagaagctaacagagcaggaagagctagaagcaggcaaagctgtgcac
tacacctgggctgaacccaccgggtctagagagctctgctggaactgtggtacttacagc
gggaaactgaagagtgaggaggacctgcgtgagaacttgaacaatgaggggaaactcttt
gttatctccttttatgaaggcctccagcgagttgtactgttcacagaggaacggcgaatc
ttcaagctgctttgtgagagtgagaaagcacagctggctgaacaggaaatcatcttgtca
ctgcagaacgttggtgtatctctggttaacaacagcagcagtcaggaggtctcttatatt
gggatcacaagctctgatgtggtgtgggaaataaagcctaagaagaagggtcgttggaaa
actctgagcacaaaagacactgagatgctcgagaagagcttcaaagtgtacatcgagtct
ggaccagttgacaacaccattgtcgacctggaaaacaactatcaggtgagctttactccc
aatggcattgatatgaggatgctgcagccattgaacgctcctctcaggaggcacttcctg
cctggggttaaggtggagtacagcatctcaccaagacagagagcctaccgtgtccaaatt
caccgcattcagatccagaatcagctgccaggtgccatcttcccctttgttttttatcca
gttaaacttccgaaatccatcactatggattcagaacccaaacctctaactgacatcagc
attgttaccagaacagcagggcactctgatatcactcgcatcaaatacttcaaggtgttg
attcaagagatggatctgaaggttgattttggtttcctgaatgctatcatggacctgttt
acacttgagaatgccagcatcatgacctcaggacaggaggtggaactgtttgagaaggat
atagaacatatgaagacagaactaaacgatggctctgctgctgacaactctcctatcagc
ctgtatgagtacttccacatttcccccatcaagcttcacctgagtttctctctgagtacc
ggaggagaagatggcatgaaggagaaaagacaaacagagatcattcctgtccagtccctg
aacttgctactgaagagtatcggtgcaacactcaccgatgcgcaggatgttgttttcaag
ttggccttctttgaattgaattttcagttttgcaccacccagcagttacagtgggaagtc
atcagacattactccaagcaggctatcaaacagatgtatgttctggtactcggcctggat
gtactcggaaatccttttggactgatcagaggcctatctgagggagtggaagcctttttc
tatgagccttatcagggggccatccaggggcctgaggaatttgttgaaggaatggctctt
ggggtgaaagctctggtgggaggagctgttgggggtatagctggagcagcctcaaggatc
actggtgccatggcgaagggcgttgctgccataacgatggatgaggagtaccagcagaag
agacgagagactatgaacagacaacccagtggcctaaaggaggggttgaccaggggtgga
aagggactggtgtctggttttgtcagtggaatcacagggattgttaccaaacctattaaa
ggagcccagaaggagggcgcagcaggtttttttaaaggtgtaggtaaaggtctggttggt
gccattgccagaccgacaggaggcattattgacatggccagcagtactttccaggggatc
aagagggcagcagagacttcacaagatattgaatcactgcgtcctcctcgcttcatccac
gaggatggtgtcatacgaccatataaggagaaggagggcttcggcagtcagatgctccag
aaaattgagaatggacgtttttccaggcacagatactttgctcatgccatggtcaacgat
tcagatttactcatgatcaccaagaggggaatcttttttgtgaccaaaggcacgtttggt
cagctgacttgtgagtggcagtatctgttcgaagagttcaccaaggatccaatgattgta
gagaaccgccgacttcgcatcgaggccaaggaaagagttaagtctgtgttccatgctaag
gagtttgggaagatcataaacttcaaaaatcctgagattgccacatgggttcttgccaaa
ctggaagatgcaagagagattttgccaaaatactaa
DBGET
integrated database retrieval system
