Antennarius striatus (striated frogfish): 137592368
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Entry
137592368 CDS
T10427
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137592368 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astr03400
]
137592368 (polb)
Enzymes [BR:
astr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
137592368 (polb)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
137592368 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
137592368 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
137592368
NCBI-ProteinID:
XP_068166597
LinkDB
All DBs
Position
3:15891578..15896460
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AA seq
355 aa
AA seq
DB search
MHTAPLIFFLRKVRYLKSTMSKRKAPQESFNEGITDFLVELANYEKNVNRAIHKYNAYRK
AASTISKYPQKIKNGEEAKKLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLT
RVTGIGPAAARKFFDEGVKTLEDLKNIEHKLNHHQQIGLKYFEEFEKRIPRAEMERMETL
IIEELKTIDPEYIGTICGSYRRGAASSGDIDILLTHPDYTSETAKQPKLLHAVVDHFESI
GFVTDTLSKGDTKFMGVCQLQKGDEDEEEFLHRRIDIRLIPKDQYYCGVLYFTGSDIFNK
NMRTHALEKGFTLNEYTIRPLGVTGVAGEPLLVDSERDIFEYIHYKYREPKERSE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagcaccattgattttttttctcaggaaagtgagatatttaaaatcaacaatg
agcaagagaaaggcgccacaggaatctttcaatgaaggaataacagactttcttgtcgag
ttggccaattatgagaaaaacgtcaacagggcgatacataagtacaatgcttacaggaaa
gcagcatctaccatttccaaataccctcagaagatcaaaaatggtgaagaggccaagaaa
ctggatggtgttggagcaaaaatagcagaaaagattgatgagttcctccaaactggcaaa
ctacggaaactggaaaagattagaaatgatgacaccagctcttctatcaattttctcacc
agagttactggaattggcccagctgctgccaggaagttttttgacgaaggagtgaagacg
ctggaggatctgaaaaacattgaacataagctaaaccatcatcaacagattggactcaag
tactttgaggaattcgagaaaagaattccacgagctgaaatggaaaggatggagacactc
atcattgaagagttgaagacgattgatccagaatatattggaactatctgtggaagctac
aggagaggtgctgcatcgagtggtgatattgatattttgctgacacacccggactacacg
tctgaaacggcaaagcagcccaagcttctccatgcagttgttgaccattttgagtccatt
ggatttgtgaccgacactctgtccaaaggagacacaaagttcatgggagtctgccagctg
cagaagggtgatgaagatgaggaggaatttcttcaccggcgtattgatatcaggttaatt
cccaaggaccagtactactgcggagtgctgtatttcactggaagtgatatcttcaacaaa
aacatgaggactcacgctttggagaaaggcttcacactcaatgagtacaccatccgacca
cttggagtcaccggtgtggcaggggagccactgttggtggatagtgaacgagacatcttt
gaatacattcactacaaatacagagagccaaaggaacgcagcgaatga
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