Antennarius striatus (striated frogfish): 137593001
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Entry
137593001 CDS
T10427
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137593001 (tncb)
04518 Integrin signaling
137593001 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137593001 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
astr00536
]
137593001 (tncb)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137593001 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_Tenascin
EGF_2
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
DUF7949
EGF
FN3_Tor_3rd
EGF_PEAR1L
Big_5
SPE9_EGF_3rd
NDNF_C
hEGF
Motif
Other DBs
NCBI-GeneID:
137593001
NCBI-ProteinID:
XP_068167656
LinkDB
All DBs
Position
3:1239481..1311054
Genome browser
AA seq
1693 aa
AA seq
DB search
MGVNGFVFGCVTLVLLLEFSTAGLVKKIIRHRREALMPKKSQENFTLPHPDQPVVFNHVY
NINVPSSSLCSVDVDLPGDTDLKQQSPLTDLHNGEQTEHTEDRDNQIVFTHRISIPKQAC
GCSDQLPDMKNILNRLEMLESELSRLREQCSTGGGCCGAQVTGEVYTKPYCSGRGNWSTD
TCSCVCEPGWKGPNCTEPECPNDCQDQGRCMDGKCECFEGFGGDDCGVELCLPDCGDNGH
CIDGSCLCDEGFIGEDCTHTNCLNNCLGRGRCVDEYCVCEEPWTGYDCSELICPKDCYDR
GRCVNGTCKCEEGYTGEDCGELTCPGNCNNRGMCVDGHCMCQTGYSGEDCSKLTCPENCN
ERGHCFNGKCICDPGFEGEDCSVLSCPDNCSNRGQCINGECVCDTGYEGEDCSEVSCPNN
CQDHGRCVNGQCVCDKGYAGEDCSIKTCPKNCMGRGECVDGKCVCFVGFKDKDCGELSCP
NDCLDRGRCVNGQCVCDNGFSGEDCSEITCPNNCLDRGYCVDGNCVCYEGFTGLECSIRT
CPGDCQNQGYCENGECVCDHGFIGQDCSEVSPPKDLTVVEVTPEAVDLSWENEMRVTEYL
ITYVPTAPGGLELNMQVPGDQKMTTIQELEPGVEYLINVYAVLNNKRSVPVSARVATHLP
EPGGLKFKSVRESSVEVHWDPLDIPFDGWNLVFRNTKEEDGEILNTLGRPETTFEQSGLG
PGQEYEVKLEVVKNNKRGPPAFKNVVTRIDAPTHVAIRDVTDTTALVTWFQPVAEVDGVS
VSYGPSSRPADRKVVELSSTDSQYHLGGLAPDTQYEVSLTAHRGQRTSITVFESFLTDLD
APRDLQTVELTDESITLEWKNSQALVDNYRIKYGPLSGGEHGELLFNPGPKDSTRAKING
LRPGTEYGMGVTAVKDERESLPTTTNAVTGLDAPKDLTVSEVTETTMMVEWKRPLAKLDS
FRLVSVSADGHRTEEVVGGSAEFHILKGLSPGMLYTISISAERGARTSRPATISAPTEEE
KPVVTNVTISEVSWDSFLLSWSAEEGALQAFLIEVSDAEMGVQRQNQTVSGEARSVVVSG
LSPSTWYTASLYGVHRGALLGPVYADTITEAEPEVQALLVSDVTPDSFRLAWTADEDSFD
TFVVMVSQSEGLGRPKELVLGGEERHAAIRDLTQNTKYQIEIFGVILGRRSKSVLEVVRT
ALGSPKGIRFSDVTDTSTTVHWSVPRARVDSYRVTYVPAHGGTAKTLTVDGSDSQTVLPH
LTPGTTYEVTVIALKGQRESEPASDSVTTALDKPRGLSAVNITDTGALLLWQPAIATVDG
YVISCSADSVSPVMERVSGNTVEFKLSSLTPATHYTVRVYAVRDLAKSAATTTEFTTDVD
APHDLVASNVQTDSGLLTWKPPRADITGYILSFESAGGAIREVVLSRTAVSYNMVQLGAS
TEYSVRLQAIAGPKRSRVITTAFTTTGVLYRHPRDCSQALLNGNSSSGLYTVYLSGDEHQ
PVQVYCDMSTDGGGWIVFLRRQSGKLEFFRNWKNYTAGFGDMHDEFWLGLSNLHKITAGG
QYELRVDLRDKGETAYAHYDKFSVSEPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHD
NDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIAFAEMKIRP
TNFRNLEGRRKRS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatggttttgtcttcggttgtgtgacattggttctgctcctggagttttca
actgccggcctggtcaagaagataatccgccaccgtagagaggcactgatgcccaagaag
agccaggagaacttcaccctgccccaccctgaccagcccgtggtgttcaaccatgtctac
aacatcaacgtcccctcctcgtccctttgctctgtcgacgtcgacctgcccggagacacc
gacctcaaacagcagagccccctgacagacctgcacaacggtgaacagacggaacacacg
gaggacagggacaaccagatcgttttcacgcaccgcatcagtatccccaagcaggcgtgt
ggctgcagtgaccagctgccagacatgaagaacatcctgaaccggctggagatgctggag
tcggagctgtctcgtctcagagagcagtgcagcactggggggggctgctgtggagctcaa
gtcacaggtgaggtgtacacaaagccctactgtagcggccgtgggaactggagcaccgac
acctgcagctgtgtctgtgagcctggatggaagggtcccaactgtaccgaacccgagtgc
cccaacgactgccaggaccagggtcggtgtatggatggcaaatgcgagtgttttgagggc
tttggtggggacgactgtggtgttgagctctgcctgccggactgtggtgacaatggccac
tgtattgacggatcctgcctctgtgatgagggcttcatcggtgaagactgcacccacacc
aactgcctcaacaactgcctgggccgtggacgctgtgtggatgaatactgtgtttgtgaa
gagccgtggacaggatacgactgctccgaactcatctgtccaaaagactgctacgatcgg
ggtcgttgtgtcaatggtacttgtaagtgtgaggaaggctacactggagaagactgtggt
gagctcacttgtcctggcaactgcaacaaccgtggcatgtgtgttgatggccactgcatg
tgccagacggggtacagtggagaggattgctcaaagctaacctgccccgagaactgcaac
gagagaggccactgcttcaacgggaaatgtatctgtgatccaggatttgagggtgaagac
tgctccgtcctttcctgccctgacaactgcagcaacagggggcagtgtattaatggggaa
tgtgtgtgcgatacaggttatgaaggagaagactgtagtgaagtctcttgccctaacaac
tgccaggaccatggccgctgtgttaatggacagtgcgtttgtgacaaaggctatgctgga
gaagattgcagcatcaaaacctgccccaaaaactgcatgggacgtggagaatgtgtagat
ggcaagtgtgtgtgctttgttggcttcaaggacaaagactgtggggagctgagttgcccc
aatgactgcctggaccgtggtcgttgtgtcaatggacaatgcgtctgtgataatggtttc
tctggtgaggactgcagtgagataacatgtcccaacaactgccttgatagaggctactgt
gttgatggcaactgtgtatgctatgagggttttactggattggagtgttccatacgtacc
tgtccaggtgactgccaaaaccaaggatactgtgagaatggagagtgtgtttgtgaccat
ggcttcattgggcaggattgctcagaagtctctcctcccaaggacctaacggtagtagag
gtcactccagaggcagtggacctgtcctgggagaatgagatgcgtgtcacggagtacctg
atcacttacgtgcccactgcccctggaggtctggagctgaacatgcaggtgcctggggac
caaaagatgaccactatccaggagctggagcctggtgtggagtatttgatcaacgtctat
gctgtgctcaacaacaagaggagtgttcctgtcagtgctagggtggctacacatcttcct
gaacccggtggcctaaagttcaagtcagtcagggagtcgtcagtggaggtgcattgggac
ccactggacattcccttcgatggctggaatctcgttttcagaaacacaaaagaggaggat
ggtgagattctgaacacactgggtcgtccagaaaccacctttgagcagtcgggcctgggt
cctggccaggagtatgaggtcaagttagaggtggtgaagaacaacaagcgtggaccacct
gcattcaagaacgtggtcacaagaattgatgcccccacccatgtggccatacgtgatgtg
acagacaccacagcactggtgacctggtttcaacctgtggctgaggtggatggggttagt
gtctcctacggacccagctccaggccagctgatcgcaaagtggtggaactgtcctctact
gactcccagtaccacctgggaggcctcgccccggacacccagtatgaggtgtctctgaca
gcacacaggggacaacggaccagcatcactgtcttcgaatctttcctcacagacctggat
gcccccagagacctgcagactgtggaactgacagatgagagtatcactctagaatggaag
aacagtcaagctctggttgacaactaccgcatcaagtacggacctctgtcaggaggcgag
catggagagctgctcttcaacccgggaccaaaggacagcaccagggccaagatcaatggc
ctgagaccgggcacagagtatgggatgggtgtgacagcggtgaaagatgagcgcgagagt
ctgccgacaaccaccaatgcagtgactggtctcgatgctcctaaagacctgactgtgtct
gaggtgacagagaccaccatgatggtggagtggaaacgccctctggccaagctggactcc
ttcagactggtttctgtatctgctgacggccacaggaccgaggaagtagttggaggcagc
gccgagtttcacatcctcaaaggcctcagcccaggcatgctctacaccatcagcatcagt
gccgagaggggcgccaggaccagcagacccgccaccatctcagctccaacagaggaggag
aaacctgtggtgaccaacgtaactatcagtgaagtatcgtgggacagcttcctgttgtcc
tggtctgcagaggagggggcattgcaggccttcttgatcgaggttagcgatgcagagatg
ggtgtccagaggcaaaaccagacggtttccggtgaagctcgaagcgttgtcgtctctggc
ctctccccctccacctggtatacagctagtctgtatggcgtccacagaggggccctctta
ggtccagtctatgctgacaccatcacagaggctgaaccagaagtgcaggctctcctggtc
tccgacgtgactcctgacagctttaggctggcctggacggctgatgaggattcttttgac
acgtttgtggtgatggtcagccagtctgaaggcctgggccgacccaaagagttggtgctg
ggcggtgaagagcgccatgcagccatcagagatctcacacaaaataccaagtaccaaatt
gaaatcttcggtgtcattttgggaagacgctccaagtcggtgctggaggtggtgagaaca
gctctgggatcacccaaaggtattcgcttctctgatgtcaccgacacgtccaccactgtt
cactggtcggtgccgagggcccgggtggacagctacagggtcacgtatgtgccggctcat
ggaggcactgctaagactctgacagtcgacggctctgactcccaaaccgtgctgccacac
ctgacccccggcaccacctatgaggtgaccgtcatcgccctcaaaggtcaaagggagagt
gagcctgcatctgacagtgtgaccacagctctggataagccccgtgggctgtctgccgtc
aacatcacggacacgggagcgctgctcctctggcagccggccatcgctaccgtagacggc
tacgtcatcagctgcagcgcagactcagtcagtccagtgatggagcgtgtgtcgggaaac
actgtggagttcaagctgagctctctgacgccagcgacacactacaccgtgagggtctac
gccgtcagagacctggccaagagcgcagccacgaccaccgagttcaccaccgatgtggac
gctcctcacgacttggtggcgagtaacgtccaaaccgacagcggcctgctgacgtggaag
ccgcctcgcgctgacatcaccgggtacatcctcagctttgagtctgcaggcggcgccatc
cgggaggtggtcctgagccgcaccgccgtctcctacaacatggtgcagctcggcgcctcc
acagaatactccgtcaggctgcaggcgatcgctggtcccaagagaagcagagtgatcacc
accgcgttcaccaccactggcgttctgtacagacaccccagggactgctcccaggccctg
ctgaacggaaacagctcgtcaggactctacaccgtctacctgagtggagacgaacaccag
ccggtccaggtgtactgcgacatgagcaccgacggaggaggctggatcgtgttccttcgc
cgtcagagtggtaaactggagtttttccggaactggaagaactacacggcgggcttcggc
gacatgcacgatgaattctggctggggctttccaacctgcacaagatcacggctgggggt
cagtacgagctgcgagtggacctgagagacaagggggagacggcctacgctcactatgac
aagttctctgtgtcggagccccggacgcgctacaaagtccatgtaggaggatacagcgga
acagcaggggactccatgacctaccaccacggacgtccgttctccacctacgaccacgac
aacgacatcgccgtcaccaactgcgccctgtcctacaagggagccttctggtacaagaac
tgtcaccgcgtcaacctgatggggcgctacggagacaacagccacagcaagggggtgaac
tggttccactggaagggtcatgaacactcaatcgcatttgctgagatgaagatcagacca
accaacttcaggaacctggaggggaggaggaaacgttcctga
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integrated database retrieval system
