KEGG   Antennarius striatus (striated frogfish): 137593912
Entry
137593912         CDS       T10427                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
astr  Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:astr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:astr03036]
    137593912 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:astr04812]
    137593912 (nedd1)
Chromosome and associated proteins [BR:astr03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     137593912 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     137593912 (nedd1)
Cytoskeleton proteins [BR:astr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     137593912 (nedd1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_LRRK2 NBCH_WD40 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_SPT8 VPS8_N KNTC1_N
Other DBs
NCBI-GeneID: 137593912
NCBI-ProteinID: XP_068169117
LinkDB
Position
4:21894016..21899804
AA seq 666 aa
MEELTRLVSTGDTVKIWDAVSMAPLEQFNPHSLIHPVAQACWSSNNQYLVSASTSGDKLV
VSSLKSTPVPVVELAEGKRQTRVCLSTSSQFLVSGGLDHCVHIWDLKTKRLHRTLKDHKE
EVTCVSFNSNDSSIASGSTSGDLVLYSLTTNMSNKAFGHGINQPIHDLRMSALKRSLLGS
ISDSGTLVLWDANTCKEIHVFDSAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
MLRSIRVDGPLTSVDFTPDGTGLVVGSTQGKIYQYDLRNSSAPSRITVAHKTSVTCLRFQ
SNTSRSKPSKLGSTKSASSKRSSSKLLNSQPDFVPIKSHTPHRQMTTTGGAGTDGMSREA
EGADLPEAEQQKFSSIGRNSLDVFSPTREDSRILGPSGDAPSGRTHVTSLEPLSKEGEGQ
QVVGRASLDIFSPVREDSHSASSSHRKTPLGTQLGASAGRCYSPLSVFQTPPPIREEEPS
PAVAGEQLVSRKVLTSDLSLPNKASSSIQEGEGQTTPTSSQQMNHTQTATPIFTPDPSLR
RANGVQAQLSYDSPVQGAPPTSTGSALSVAVSSSLSQNIAEVVGQAGAPLTSLQVHFIQN
MIHETLEDFRDSCHRDIVNLQVEMVRQFYIQLNEIHGLIEKYSVNESLVEEIERLKEENR
QLRTNY
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggaggaactgactcgtcttgtgtctacaggagacactgtgaagatctgggatgctgtt
tccatggcgcccctggaacagttcaatcctcacagccttattcaccctgtagcgcaggcc
tgctggagctccaacaaccagtacctggtgagtgccagcaccagcggagacaagctggtt
gtttccagcctcaaatcaactcctgttccagtggtggagctagctgaggggaaaagacaa
acccgggtgtgtctcagcacatcatcacaattcctggtcagcggcggtctggatcactgt
gttcacatctgggacctgaagaccaagcgattgcatcgcaccctaaaggatcataaggaa
gaggtgacctgtgtgtccttcaattctaacgacagcagcatcgcctccggttccaccagc
ggagatctggtcctctatagtctgaccaccaatatgtccaacaaagcatttggacatgga
atcaaccagcccatccacgacctgaggatgtcggcattgaagcgctccctgctgggcagc
atctctgacagtggcaccttagtcctctgggacgccaacacttgcaaggagatccacgtt
tttgacagcgctcataaggcccctggctccggcctggccttctcccccgccagcgaactg
ctggtggtcagtgttggcctggacaagaagatcgtttgctacgacacggcaagcaaaata
atgctgaggtcaatccgggtggacggcccactgacttcggtggacttcactccagatggt
actggtctggtagtgggatccacccagggcaaaatctaccagtatgacctgaggaactcc
agtgctcccagtaggatcaccgtggcacataaaacctccgttacctgcctgcgcttccag
agcaacactagcagaagcaagcccagtaaactgggctccactaagagtgccagctctaag
agatcctccagcaagttgctgaacagccagccagacttcgtccccatcaaaagtcacacc
ccccacaggcagatgacaactacagggggcgctggaacagatgggatgtccagggaggct
gaaggtgctgacctaccagaagcagagcagcagaagttcagcagcattggacggaacagc
ctggatgtgttctctcccacacgggaagactctaggatcctggggccaagcggagatgca
ccttctggaagaacacacgttaccagtttggaaccactgtccaaagaaggggaaggtcag
caggtcgtaggtcgggccagtttggacatcttctccccagtcagagaagactctcattca
gcttccagctcacatcgcaaaacacccttgggaacccagctgggggcctctgcagggcgc
tgctacagcccgctatctgtcttccagacccctccaccaataagagaagaggagccaagc
cctgctgttgcaggtgaacaacttgtctccagaaaggtgctgacctctgacctcagtctg
cccaacaaggccagcagctccattcaagaaggagagggtcagaccacgcctacatcatcc
cagcagatgaatcacacacagacagccacacccatcttcactccagatcccagcctcagg
cgagccaatggcgtacaagctcagctgagctacgactcacctgtccagggagctccaccc
accagtacaggttcagcactttcggtagccgtttcctcctctctgtctcagaacatcgcc
gaggtggtcggtcaagccggagctcctctcacctccctgcaggtccacttcatccagaac
atgattcacgagactctagaggacttcagggacagctgtcacagagacatcgtcaacctg
caggtggagatggtccgacagttctacatccagctgaacgagatccacggcctgattgag
aagtactctgtgaacgagtctctggtggaggagatagagaggttgaaggaggagaaccgc
cagctgaggaccaactactga

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