Antennarius striatus (striated frogfish): 137594199
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Entry
137594199 CDS
T10427
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137594199 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137594199 (edc4)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137594199 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
137594199 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
RMC1_N
WDR55
Uteroglobin
EIF3I
Motif
Other DBs
NCBI-GeneID:
137594199
NCBI-ProteinID:
XP_068169629
LinkDB
All DBs
Position
4:complement(6843818..6871863)
Genome browser
AA seq
1390 aa
AA seq
DB search
MASNSNIDIEGATQHLRDILKLDRPDNGTDTQSDGQRMPSFNGELNGLLGAAGLLGSTDR
SAMSESSKPISTDISSTQETQIICLSGDDGSTCIPITSNNVEIVASQDSSINSKARGSNK
VKIQPVAKYDWEHKYYYGRLIAVSSSFVAYAIRGANNHAMIRVLSVGFAERSLLKGFTGA
VTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTGSKILDQMVIHIQRPEDTPLNSHRRLIWC
PYIQDDNEENQDDTSQTLALLHEDKAEVWDLEVLRSNNSSWPVDATDIKEGLITVKGHTQ
RVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGRPLSCLLFCDNH
KRQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDMFNSSVLPSLKACLDLSS
EYLILTDVQRKVLYAMELQQDLEKGKATFTAVSEFLLTHPVLSFGVRDVAHSRLRHTEVL
PAEEESESMTTEGTQAPTESKSGIQIKLYCVHTKSLQDVQIWFQPNLGSRSAGFLPHSDS
QDGLAGFSDHLTDQSSDKESGSGSQTDLRKIPSLPVPSDFLPTSGSSTGTMLKLMTPDAF
MTPSTSVPASPASSGSSLTIVTAISSNSDSTNRVGEDSQSPNRVENNCNTSLALAVSSTS
PRAASAVLLSGLESLQGLVSTSGPLAHDSPQVLDSPLLPPLASPTRARSPDVISSASTAM
SQEMPEIASQTLQHQRGLVSTLDSSPLSALQTDSMASAASALHLLTSPRTANNGLLPLEL
GGADGPVGGPIESEPRLSVTPSLLENALSQENPGVGGGSSEGSVSHTPWPAAPDITRETR
NSLRDNGLGDCSRDESKDRRLSSPFQRRSYHLAQNDSQDAGAEQSDPDDEVASPASSSGN
CARSSHRLPVKDWKTSPRGSPKLKRKAKREEGESSQSRKMDSGQMNTDVKDELLMVLRSQ
QRELTELRAQMEAIQSSIIAKEERVLTHHQELEQRRLERILAESQNHHQQLQEQLSQQLS
HALSAALTNRMDKVLREEMKKTVPQTISKSLEPVTGQLSNTVTAKLAAVEVTLKDNVSKV
VKSKNITDAIGRAAAEAMQGPIQAAYKDTFQSIVLPVFERGCQSMFQQINESFKQGTQEY
IQQLETYTKSRKQREQESRDPLIGQLQQMIDSFQASTDQLSNNISANVRAEVQHQIQMTV
GNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQANI
LQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQQSCPLSQPVLLSLIQQLSSN
LTTRSELKIGYLEDAVMNLDHSDPLTRDHMTAVLAQVRLKLLAFLQQDPHSPLNKRARRL
MMMLQGLVTH
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaattcaaacatagatattgaaggtgcgacccagcatctgcgtgacatcctc
aagctcgaccgtcccgacaacggcaccgatacacagtcagatggtcagagaatgccatct
tttaatggagaactgaatggattattgggtgcagcaggccttcttggaagcacagatcgg
tcagccatgtccgagtcttccaaaccaatctccacagacatcagcagcacacaagagact
caaataatttgcctttctggtgatgatggctccacctgtatacccatcacctccaataat
gttgagattgtagcaagtcaagattccagcatcaatagcaaagccagaggcagcaacaag
gtgaagattcagcctgttgccaagtacgactgggaacacaagtactactatggcagactg
atagctgtatccagctccttcgtggcctatgccatcagaggagccaacaaccatgcaatg
attcgtgtcctgagtgtaggttttgctgagcgatctctgctgaagggttttactggagct
gtcacagatttggcatttgcccacctcgactcctccctgttgggttgtgttgatgaagct
ggcaacctgatggtctggcagctcacctgcactggaagcaagatacttgatcaaatggtg
attcatatccaacgacctgaggacaccccactgaactcacaccgtcgtctcatctggtgt
ccctacattcaagatgacaatgaggagaaccaggatgacacaagccaaactttagctctt
ctacatgaagataaggctgaggtctgggacctggaggtcttgagatccaacaacagcagc
tggcctgttgatgccacagacattaaagaaggcctcatcacagtcaaaggacatacccag
cgagtcagtgaaggggccctttctccagatggcactgtgttagccactgccagtcatgat
ggatatatcaagttctggcagatatacatagaaggaggacaggataagcccagatgtctt
catgaattgcggcctcatggaggacgtccactttcctgccttctattttgtgacaaccac
aaaagacaggatccagaagttcctttctggcggttcctgataactggagcagatcagaac
caggagttaaaaatgtggtgcactgtttcttggacctgtctacagaccatcaggttttct
ccagatatgttcaactcatcggttctgccgagtctcaaggcctgtctggacctctcctct
gagtatctcatcctgacagatgtacagaggaaggttttgtatgcaatggagctgcagcag
gatctagagaagggaaaggccactttcacagcagtatcagagttcctgttaacccaccct
gtgttgagctttggtgtccgtgatgttgcccacagccgattgagacacactgaggtcctg
cctgcagaagaagagagtgagagcatgacaacagagggcactcaagcacccacagagtca
aagtctgggatccaaattaaactctattgtgttcacacaaagagtctacaggatgtccag
atctggtttcagccaaacctgggttctagatctgctggcttcctgcctcactctgattct
caggacggtttggcggggttttcagaccatctcaccgaccagagctccgacaaggaatca
ggaagtggctcccagaccgacttaaggaagatcccatcacttccagttcccagtgacttc
ctgccaacctctggtagcagcactggaaccatgctcaagctgatgactccagatgccttc
atgacaccaagcacttcagtaccagcatctcctgctagcagtggtagcagtctgaccatt
gtgacggcaattagcagcaactctgactcaacaaacagagttggtgaagatagccagagc
cccaacagagtggagaacaactgcaacactagtcttgcacttgccgtatccagcaccagc
ccaagagctgcttcagctgtgcttctttcagggctagagagcctacagggtttagtgtcc
actagtggtcctttggcacacgacagccctcaggtcctggattctcccctcctgccacct
ctggcctcgccaaccagggctcgctctcctgacgttatctcctcagcctccacggccatg
tcccaagagatgcctgagattgcatcccagactctgcaacatcagcgtgggctggtctcc
accttggattcctcgcctctttctgctctccagaccgacagcatggcctctgctgcatct
gccttgcatctgctcacctcaccacgcactgccaacaatggcttattgccccttgaactt
ggaggtgcagatggtccagtgggtggaccaatagagtcagaacccaggctcagtgttacc
ccatcactactcgagaacgccttatcacaggagaaccctggtgttggaggagggtcttca
gaaggcagtgttagtcacactccatggccagccgctcctgacatcaccagagaaaccaga
aacagtctgagggacaatggtctaggagactgctcaagagacgagtcgaaggacagacgc
ttgagctcccctttccaacgtcgctcctatcacctcgcacagaacgacagtcaggatgct
ggtgcagagcagagtgaccctgatgatgaggttgccagtcctgcttcatcctcagggaac
tgtgctcgctcttctcatagattaccagtgaaagattggaagacatcgcctcgaggctct
cccaaactaaagaggaaggctaagagagaagaaggtgaatcatcgcagtccaggaaaatg
gactctggccagatgaatactgacgtaaaggatgagctgctgatggtgttgcgcagccag
cagagagagttgactgaacttcgagcacagatggaggccatccagagctccatcatagct
aaagaagagcgggtactgacccaccaccaagaactagagcagcgcagactggagaggatc
ctggcagaaagtcagaatcaccatcagcagcttcaggagcagctcagccagcagctcagc
cacgctctcagcgcagcgctaaccaacagaatggacaaagtattacgagaggaaatgaag
aaaacagtcccacaaacaatctcaaagagtctggagccagtgacgggccagctgagcaat
acagttactgccaagttggcggctgtggaggtcaccctgaaggacaatgtcagcaaggtg
gtcaaatcaaagaacattacagatgcaattggtcgtgccgcagctgaagcgatgcagggg
cccatccaggcagcctataaagacaccttccagagtatcgtgctgcccgtgtttgaaaga
ggctgccagtccatgtttcagcaaatcaacgaaagcttcaaacaaggcacacaagaatac
atccagcagctcgagacctacacgaagtctagaaagcagagagagcaggagtcacgggac
cccctgattggccagctccagcagatgattgacagctttcaggcctccaccgaccagctg
tccaataacatctcagctaatgtccgggcagaggttcagcaccagatccagatgacggtg
ggaaacctgcaggagtcaatacttagccacgtacaaagaattgtcaaaggggaggtgagc
ctggcaatgaaggagcagcaggcagtggtgacctccagcatcatgcaggcaatgaggtca
gcagccggtacgcccgtccccacggcacacctggactaccagacacagcaggccaacatc
ctgcagctcctccagcaaggccagctcaaccaggcttttcagcaggcgctgtcagcgacg
gatctgaacctggttctctatgtgtgtgagaccatcgactctcagcaggtgtttggtcag
cagtcctgtcctctcagccagccggtgctgctgtcgctcatccagcagctgtcttccaac
cttaccacccgctctgagctcaaaatcggttacctggaggatgcggtgatgaatctggat
cacagcgacccactgacgcgagatcacatgacggccgtgctagcccaggtcagactcaag
ctcttggccttcttgcagcaggacccccacagcccgctcaacaagagggcgcggcgcctc
atgatgatgctgcaaggtctcgtcacccactag
DBGET
integrated database retrieval system
