Entry |
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Symbol |
acanb
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Name |
(RefSeq) aggrecan core protein
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KO |
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Organism |
astr Antennarius striatus (striated frogfish)
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Brite |
KEGG Orthology (KO) [BR:astr00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:astr00535]
137594327 (acanb)
00536 Glycosaminoglycan binding proteins [BR:astr00536]
137594327 (acanb)
04091 Lectins [BR:astr04091]
137594327 (acanb)
Proteoglycans [BR:astr00535]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
137594327 (acanb)
Glycosaminoglycan binding proteins [BR:astr00536]
Hyaluronan
Extracellular matrix or blood plasma proteins
137594327 (acanb)
Lectins [BR:astr04091]
C-Type lectins
Lecticans
137594327 (acanb)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4:24855834..24869593
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AA seq |
1413 aa
MTPLLLLCLSLPLISATVSFEDHEELDGTLRVSIPLEMPLRPLLGSKVVVPCYFQDNTVN
DPGAPTIAPLSHRIKWTYVTKEKVTTILVASEGKIQVEMEYLDRVTMINYPLVPTDASIE
ITELRSKDSGTYRCEVMHGIEDNYDSVEIQVQGIVFHYRAITTRYTLTFEKAKAACILNS
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIQEPREPCYGDKEDFPGVRTYGVRDVN
ETYDVYCFAEKMSGRVFYSMSVEKFSFYEAGDQCTKLGARLATTGELYLAWKAGMDVCNA
GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICFQDGEDEGAVP
MKTTPFPDIIRITPAPGVYPTLTPPPEGEEIVGGEIDTLFPSPIPPSVTDRYAKVTPVVL
ETGLIDAEMGPTGVVFHYRPITGRYTLTFLEAQEACQSIGAIIASPRQLQAAFEKGYHQC
DAGWLCDQTVRYPIVHPRDNCAGNLPLLPGVRSYGLRPASETYDVFCYVEYLQGEVFFTS
DYDSFSYDEAVQHCQKLNTTLATTGQLYAAWNQGLDKCRPGWLMDRSVRYPITTPRSHCG
GGQVGVHIIYAFPNQTGFPDEHSRYDAYCFRKAEIETVVNVTIVTEDVIKKTMVTTDQAA
PEAGIETIVTEDVINKTTVTVDQFAPTVRTTVTYTEPDTSIDISLLEELINKTTTSTDGA
VPSVQPIVPPLPDEVSGSGSADHSASGVSEESRGSGESSTFSASGDISGSGQEVTFSGQV
DVFSGEGSASGGPQEGEGGSAVIFTSGESGSASASGEGLDWEHSGFVVSGSGVASGSGDI
SGSGGDSVIIMVDGRLVEVSKPQTEQELGQGGTDSSGAFLESGSGDISGSGIGGFSGDIS
GSGIGGFSGDISGSGFGGFSGDISGSGFGGLSGDISGSGFGGFSGDISGSGFGGFSGDVS
GSGSDGFSGISFVDHSGIDLTVQSSGEQEVSGYRPYGSGFPSGLPSGFPSGISGSGSASG
DSFHQSGDVIYLTDSDMMEVTVPPLIHQPEQGRGVVEMSGGGSGSGIPQEFSGALDHISG
SGASQETAELSVVPSPESHVTYTEYAGALGDEDPEARAGLTVYEVTPDTAYDSPTTAPSV
SLETPAVVEQPIVVEDSTNPCDPNPCRSGSCSVQGELAVCQCPDGFTGVDCSTPVQGCAE
GWLEFGGSCYLHFAERDTWSEAEQRCQEVNAHLVSISSQEEQQFVNSNGQDYQWIGLNDK
DVQNEFRWTDGSPLTFENWRPNQPDNYFNSGEDCVVMIWHEGGQWNDVPCNYHLPFTCKA
GPAMCGPPPEVENGRPMGGSRDRYIVNSIVRYQCDVGYTQRHLPVIRCMANGLWEEPQVE
CTEAGTNGSRLHKRSLRRRSKGAGSQREQRKLL |
NT seq |
4242 nt +upstreamnt +downstreamnt
atgacccccctgcttctgctgtgtttgtccttgcccctcatttcggcaacggtatcgttt
gaagatcatgaagaattagatgggacgttacgcgttagcatccctttggagatgcctctc
cgccccctgctgggcagcaaggtggtggtgccatgctacttccaggacaacacagtcaac
gaccccggtgccccgaccatcgccccgctctcccaccgcatcaaatggacctacgtcacc
aaggagaaagtaaccaccatcctggtggcgtcagaggggaaaattcaagtggagatggag
tatctggacagagtgacaatgatcaactacccactggtgccgactgacgcctccatagag
ataacagagctgaggtccaaggattctggcacctaccgctgcgaggtgatgcacggcatt
gaggacaactacgactccgtggaaatccaggttcaaggtatcgtgttccattaccgagcc
atcaccacccgctacaccctgacttttgagaaagccaaagcagcctgtatcctgaacagc
gccaccatcgccactcctgcacagctccaggctgcttatgatgatggataccaccaatgt
gacgctggatggctctcagaccagactgttaggtacccaatccaggagcctcgggagcct
tgctatggagacaaggaggactttcctggggtgagaacctacggtgtcagagatgtcaat
gagacctacgacgtctattgcttcgctgagaagatgtcaggaagagtcttctactccatg
tctgtggagaagttttccttctacgaagcaggagaccagtgtaccaaacttggtgctcgg
ctcgccactactggggagctttacctggcgtggaaggcgggaatggatgtgtgtaacgct
ggctggctggcggacaggagtgtgcgttaccccatcaacatcgcgaggccccagtgtgga
ggggggctcctaggagtcagaaccgtctacctgttccccaaccagaccggatacccctac
ccagactctcgctacgatgctatctgcttccaagatggtgaagacgaaggcgccgtgccc
atgaagaccacccctttcccggacatcatccgcattacaccggctcccggggtgtaccca
acccttacccctccacctgagggtgaggagatcgtgggtggagaaatcgacacccttttc
ccatcgcccatcccacccagtgtgacggatagatatgccaaagtgacccctgtggtcctt
gaaacgggcctgattgatgctgaaatgggtcctacaggtgtggtgttccactaccgaccc
atcactggccggtacactctgacctttctggaggctcaagaggcctgccagagtatcgga
gccatcatcgccagcccccggcagctgcaggctgcctttgagaaaggctaccaccaatgt
gatgctggttggctgtgtgaccagactgtcaggtatccgattgtccaccccagagacaac
tgtgctggaaacctgcccctcctccctggagtcagatcttatggcctgagaccagctagc
gaaacttatgacgtattctgttatgtggaatatctgcaaggtgaggtcttcttcaccagt
gactacgacagcttctcctatgatgaggcggtgcagcactgccagaaactcaacaccacc
cttgccaccaccggccagctgtacgccgcctggaatcaagggcttgacaaatgccgtcca
ggttggttgatggaccgcagcgtccgctaccccatcacgaccccgaggtcccactgtgga
ggcggtcaggttggggtccacatcatctacgccttccccaaccagacaggatttcctgac
gaacattcacgctatgacgcctactgttttaggaaagctgaaattgaaacggttgtgaat
gtcaccatcgtgacggaagacgtcatcaagaagacgatggtcacaactgatcaagctgct
cctgaagctggaattgaaaccatcgtgacagaggatgtaatcaataagaccacagtcaca
gtggatcaattcgctcctacagttaggacgactgtgacctacacggaacctgataccagc
atagacatttctctactggaggagcttatcaataagacaaccacctcaaccgacggagct
gttccttccgtgcaacccattgtaccaccactccctgatgaagtgtcaggctctggttct
gctgatcattcagccagcggggtgtctgaggagtccagggggtccggggagtccagcacc
ttcagcgccagcggtgacatctctgggtcgggacaggaagtcaccttcagtggacaagtc
gatgtcttctctggagaggggtcagcctctggaggtccacaggaaggagaagggggaagt
gctgtcatcttcacatcgggagaatcgggtagtgcctctgcatctggggagggactggac
tgggagcactctggtttcgttgtatccggatcaggtgttgccagtggaagtggggacatc
agtggtagcggtggagactctgtgatcatcatggtggatgggaggttggtggaggtgtcc
aaaccccaaaccgaacaagagttaggccaaggaggcaccgattctagtggggctttcttg
gaatccggatcaggagatatatccggatcaggcattggaggattttctggagatatatcc
ggatcaggcattggaggattttctggagatatatccggatcaggctttggaggattttct
ggagatatatccggatcaggctttggaggactttctggagatatatccggatcaggcttt
ggaggattttctggagatatatccggatcgggctttggaggattttctggagatgtgtct
ggatcaggctctgatggattttctggcatctcctttgttgaccacagcggtattgatcta
acagtccagtcgtctggggagcaggaggtgtccggatatcgcccctatggatcagggttc
cccagtggccttccaagtgggtttccctctggcatctcaggcagcggttctgcctctggg
gactctttccatcagagcggtgatgtcatctacctaacagacagtgacatgatggaagtg
actgtaccccccctgattcaccaacccgaacagggccgcggggtggtggagatgagcgga
ggaggaagtggatcggggatccctcaggaattcagcggcgctttggaccatatctcagga
agtggagcctctcaggaaactgctgagctttctgtcgtcccatcgcctgaatctcacgtt
acttacaccgaatacgctggcgctcttggggatgaggatccggaagcccgagcagggttg
acggtgtatgaagtgactccagacacagcctacgacagcccaaccactgcaccatcagtg
tctttagaaacacctgccgtcgtggagcagccgatagtcgtggaagactccacaaacccg
tgtgatccaaacccctgcaggtcgggctcttgctcagtgcagggcgagctggcagtatgt
cagtgtcctgatggtttcactggcgtggactgctcaacgcctgtacagggctgtgccgag
ggctggttggagttcgggggcagctgctacctccactttgctgaaagagatacctggtcc
gaggcagagcagcgttgtcaggaagtcaacgcccacctggtcagcatcagctcccaggag
gagcaacagtttgtcaactccaacggtcaggactaccagtggattggactcaatgacaaa
gacgtgcagaatgagttccgctggacagacggcagtcctttgacctttgagaactggagg
cccaaccagccggataactacttcaactccggggaagactgtgtggtgatgatctggcat
gagggtggccagtggaacgacgtgccatgtaactaccaccttcccttcacatgcaaggcg
ggacccgccatgtgtggccctccccctgaggtggagaatgggcggccgatgggcggcagc
agagaccgctatatcgtcaactctatagtccggtaccagtgcgatgttggctacacgcag
cgccacctacctgtgatacgctgcatggcaaacggactgtgggaggagccacaagtggaa
tgtacagaagccggcaccaacggcagcaggctacacaaaagatccctcagaagaagaagt
aaaggagcgggaagccaacgggaacagaggaagctgctctga |