Antennarius striatus (striated frogfish): 137594870
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Entry
137594870 CDS
T10427
Name
(RefSeq) 3'-5' exoribonuclease HELZ2-like isoform X1
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137594870
Enzymes [BR:
astr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
137594870
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137594870
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137594870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_30
AAA_19
OB_HELZ2
UvrD_C_2
ResIII
UvrD-helicase
AAA_22
UvrD_C
Viral_helicase1
DEAD
AAA_16
AAA
NPHP3_N
SLFN-g3_helicase
nSTAND3
Bac_DnaA
AAA_24
RnlA-toxin_DBD
Motif
Other DBs
NCBI-GeneID:
137594870
NCBI-ProteinID:
XP_068170555
LinkDB
All DBs
Position
5:24819603..24834894
Genome browser
AA seq
2419 aa
AA seq
DB search
MIGGEKEMSHSADAQALTSYNDRLLEEFRNSSNDNHILSEEIDDVGVSCDKDLTVSCDQT
DVTLQWNFQVKTERQLVHVALLKQEPGASFTFGEVGSVACIYSSGEFFLMEDITYEVTVS
FTAVNPGLYEQWLVLDFDTRPVLLRKIKVRVGQQTVEDYTDTPVDYGVAFRSAEHWHQWN
RVIITCLSRTDDEVEMLNKYKPPQLRFLSRLHNHQISLNHDNYKERMHDFLYREERAKDQ
VISRLTVRGEITTLKILTSLEFGMAIAPEGQLFCAVYIPYNLTPDTPEGLVLKRSVQSVL
IAPLSSNDPNSKVYEAIILHVNARENKMYLKLSKICCCDLALKSDQSYQMEVQFQVNRYN
FCIMHKAVDLLPDTKRVLPDLKNCGVPVTSILCEKLNKKQHSALEFITGKADKFVAPLLI
YGPFGTGKTFTLATAARKLCEHPGNKVLVCTHTNSSADLYIREHFHPFMDKINNRMKPIR
IKANKANALSATDDITIKYCFLADNGQTFLPPTEAALDSHNIVITTTAMAIYFYDLKLPE
NYFTHVLIDEASQMLECEALMAVGLAGPNTKVVLAGDHMQMGPKLFSIGDRNRSHCTLFN
RLFHLYQGQKCDTAQSSRVIFNENYRSTNEIVEFVSTHFYQGKNIIKATADIPPPTNGHA
LKFHHVRGECLFDTVSMSWFNKEEIAIVVEEVKEILEHWPSSWGINNESTVCVLSDGSQV
RQIRTVLKRRGLGEVYVENIANVQGKQFRVVILTAVHTGNSLKTSHLPGLELFNDSRVLN
TAMTRAQSLVVVVGDAAALCCFGKCSGVWKSYIDHCINNSSVAPHHFTQDFFERDVMETA
RFQKSEQSDESNTQSDAILQELKDEYKQLEMDYSLDEEEVEFDKVDQHNSGSSYNVRDVD
FLELCKELPNIYKSGKLFRQSHNRGYVRLFQDPTKHIHIKGKANLHNVFTGDEVVLEKRR
VVSITKEDESARLLVCTLQDEDHSKPRQNSNKKFVTRTMIPINRTEPKVVIVLSKQRRNF
LPIWEQIDEQWFIVSYERLNENLKQDNVFLVKVIAWKKWFNLPQGNVIDILPVGGSLDEG
LTILNEELKIEPNIWSSVKDFSVEDEHKTYRKDLCGIITFTVDPESCSGQTHRDLDDAIS
VRETGAYYELGVHIADVASFVTPGCALDVVAKERGISHYCSGGEAIHMFPKDNSRHFSLL
QGKERRVISLMFKVNKQTHKIDGKPKFQLSLINSNKQLSYEEAEKMISNRCERNQRFDTV
DDCVRVAYCFAKAQRKLRLKDWAYAQTDDDRLPGKRKANLMIEELNMLFNQLASEVLIGS
EDTKYCTPLRCQEEPYPEKIQEFLKKKCAAFIPLSFHLRHRVLHDRQSLNCLTFRALVEV
WKDIQAAARTDDVDKMVDLIAADDIHPLLQPVINEFKKCSSKAYIICSNSSHRAGVGHYS
LSVKSYTQASSPIRRYMDIVLQRLLHSVICNKHTQYTATEITDLCNYFESNIKCAKAREQ
KAEQISYAVSMSKQSASKIAFVVSADPNTESFAVSFPFNKNIFEQSLEIMYRDLQLWDQP
LYDEENHCITLTWKRVIYSSASMQRELKMPFSGPCVDLPLTIWEAAIEAIEEEDFDQAKR
LILSINTDQMGEQNNQMPLPETNTCVSVEVQTPKVQNDHEVDINMQLQAGDTLRVQLTSE
IKRGYNMPTIQLVRIKPHFEICVDHVHRPIYCFSRSTDDPSRNHYSNPQEYVRIWKPLCE
MESAATAVDEGDSVIIEDLEIDFIQEKEDTLTGSFFLSKAWIDDMDFEWNLLRCLLCIRK
RGLLLPTPLKHSAAVDPKDFTWVAHAVSRKVEERKNPENSGIEVEFYVNHLPMETIPDCV
FQKKTLFTVEIIPKLIPDIRKEDAVTNVLTACHLVTAVAVGQHIPKEVNATWYNISRTLP
TRLPTLNDSQRLAVVRALNSTFTLIQGPPGTGKTIVGVYIVKHFFELNSKSPRKFVHLKD
KNKKEVILYCGPSNKSVDVVAEFLLKFGDELKLLRVYSQQVEMLDYPYPVSTLQFSSLRH
ERAKPELRGITLHHRMREDQNPYSHEIKQFDQRMQRALEQKIIPAEEIKEYKALLRAART
HEFEHHDVILCTCTQASTPGLNKVVSARQILIDECGMATEPQALIPLVCNNPEKIVLIGD
HKQLRPIVKNPRVRMLGMARSLFERCHTMHEKRTVMLNTQYRMHVDICKFPSSQFYEGKL
KTGVEQPQSVLCVEKRRMPIVFGDIEGTTVSLVVSTARGNERSKANEQERQKAIDVAEKL
VKAAKVEQRSIAILSPYNAQVAEIKDDLRNKKMEEITVATITKSQGSEWRYVIISTVCSL
PRKEIERETDPDGAWLSKHLGFVGDPNQINVAITRAKEGLCILGNQRLLYCSRTWKNLLD
HYTCHSAVTNADRISVLCA
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgataggaggagagaaggaaatgagccacagcgctgacgcccaggcgctcacgtcctac
aatgaccggctcttggaagaattcaggaacagcagtaacgacaatcacattttgtcagaa
gaaattgatgatgtcggcgtgtcatgtgataaggatttgactgtgtcatgtgatcagacg
gatgtaacattgcaatggaatttccaagtcaaaacagagagacagcttgtgcatgtggca
ttgctcaagcaagaaccaggcgcttcattcacctttggtgaagtgggttctgtggcctgc
atctactcatcaggagaattttttctcatggaagacataacctatgaggtcactgtttct
ttcacggccgtcaacccaggcttgtatgaacagtggttggtgctagattttgacacaaga
ccagtgcttctgaggaaaatcaaagtcagagtaggccagcagacagtggaggactataca
gacacacctgtggactacggagtcgcctttcgaagtgcagagcattggcatcaatggaat
agagttatcatcacgtgtttgtcaaggacagacgatgaggtggagatgttgaacaagtac
aagcctccccagttgagatttctgtctagacttcacaaccaccagatttcactgaatcac
gacaactacaaggaaagaatgcacgacttcctgtatagagaagaacgggctaaagaccag
gtgatctcaaggctaactgttcgtggagaaattacaacattgaaaatattgaccagtctg
gaatttggaatggcaatagctcctgaaggacagctcttttgtgccgtctacatcccatat
aatctcacaccagacacacctgagggattggtactaaaacgaagcgtccaatctgtcctg
attgctcctttgtcttcaaatgatccaaactccaaggtttacgaagccattattctgcat
gtcaacgcaagagagaacaaaatgtatttgaaactctctaaaatctgttgctgtgatctc
gcactcaaaagtgaccaatcgtaccaaatggaggtgcagttccaggtgaatcgctacaac
ttctgcatcatgcacaaggctgtagacctccttccagatacaaaaagagttctaccggac
cttaaaaactgtggcgttcctgtgactagcatcctctgtgagaaactcaataaaaagcag
cactcagcacttgaattcatcacagggaaagctgataaatttgtggcaccgctactcatt
tatggaccattcggaacggggaaaacattcacccttgcaacagcagccagaaaactttgt
gagcaccctggtaacaaagtgcttgtttgcacccacaccaacagttctgcagatctgtac
atcagagaacatttccacccatttatggacaagataaataacaggatgaaaccaattcgg
ataaaagcaaacaaagcaaatgctttgtctgcaacagatgacatcactataaaatattgt
tttcttgccgataatggacagacttttctaccacctacagaagcagccctagacagccac
aacatagtcatcaccaccactgcgatggccatatatttttatgatctcaagctccctgag
aactacttcacccacgttctaattgatgaggcctctcaaatgctggaatgtgaagcttta
atggccgtcggtcttgctgggccgaacaccaaagttgtattggctggagatcatatgcaa
atggggcccaagcttttctcaattggtgatcgcaaccgatcccattgcacactttttaat
cgcttgttccacctctaccaaggccaaaagtgtgacactgcccagagcagtagagtcata
ttcaatgaaaactaccgctccaccaacgaaattgttgagtttgtgtccacccatttctac
cagggtaaaaacattatcaaagctacagcagatattccacctcccacaaatgggcatgcc
ctgaagtttcaccacgttcggggagagtgtttgtttgacacagtgtccatgtcctggttt
aacaaagaagagattgctatagttgttgaagaggtgaaagaaattctcgagcactggccg
tcatcctggggcatcaataatgaaagcacagtctgcgttttatcagatggcagtcaagtt
cgccagattaggacagtgcttaaaagaagaggccttggtgaagtctatgtcgagaatata
gcaaatgtgcaaggcaaacagttcagggtggtcatactgactgctgtgcatacaggaaac
agcctaaaaacatctcacctacctggtctggagttatttaatgacagccgtgttttaaac
actgcgatgaccagagctcagtctcttgtggttgtggttggagatgctgcagcactgtgt
tgctttgggaaatgctcaggagtatggaagagctacatagaccattgcatcaacaacagc
agtgttgcaccgcaccatttcacccaagatttctttgaacgagatgtaatggaaactgca
aggtttcaaaagtctgaacagtctgatgaaagcaacactcaaagcgatgcaattctacaa
gagttgaaagatgaatataagcaactggaaatggactatagtttggatgaggaggaagtg
gagtttgataaagttgatcagcacaattcagggtcatcatacaatgtcagggatgttgac
tttttagagttgtgtaaagaactaccaaacatatacaagtctggaaagttgtttaggcag
tcacacaacagaggttacgtcagactttttcaagaccctaccaaacatattcacattaag
ggaaaggcaaacctgcataatgtcttcactggggatgaagtggtcttagaaaaaagaagg
gtagtcagcatcaccaaagaagatgaatcagctcggctgcttgtgtgcacgcttcaagat
gaagatcacagcaaaccacgacagaattccaataaaaaatttgtcacaaggacaatgata
cctataaatagaactgagcccaaagtagtcattgtcctgagcaagcaaaggcgcaacttc
ctaccaatatgggagcaaattgatgagcagtggttcattgtgtcatatgaacgtctcaac
gaaaatctgaaacaggacaatgtgttcctggtgaaagttattgcttggaaaaaatggttt
aacctcccacaggggaacgtcatagatattcttccagttggaggatctttggatgaggga
ctaacaatcctgaatgaagaactgaaaattgaacctaatatatggtcatcagtcaaggac
ttctccgtggaagatgaacacaaaacatacagaaaggacttgtgtggaattatcacattc
actgttgatccagagtcttgctcgggtcaaacacatagagaccttgatgatgccatcagt
gtcagagaaactggagcctactatgagttgggcgtccatattgcagatgtggccagtttt
gtgactccagggtgtgcattagatgtagttgcaaaagagcgtggtatttcacattactgt
agtggtggggaagccattcatatgttccccaaagataacagtagacatttcagtcttctg
caaggcaaagaacgcagggtgatttctttaatgttcaaagtaaacaaacaaacacataag
attgatggaaaacccaaattccagctgtcattgatcaactctaacaagcagttgtcttat
gaagaagcagagaaaatgatctccaacagatgtgaacgaaatcaaagatttgacacagta
gacgactgtgttcgagtggcttattgtttcgccaaagctcagaggaagcttaggcttaag
gactgggcttatgctcaaactgatgatgacagactgcctggaaagcgcaaagctaatctt
atgatagaagaactgaatatgttattcaaccaacttgcatcagaggttttgattggttca
gaggacacaaagtattgcacaccccttcgctgtcaggaggaaccatatcctgaaaagata
caagaatttctaaagaagaaatgtgcggcatttatacccctatcttttcatttgcgtcac
agagttctgcatgacagacaatctctgaattgtttaactttccgtgccctcgtggaggtt
tggaaagatatccaagctgctgccagaacagatgacgttgacaagatggttgacctgatt
gcggcggacgacatccatcccctgcttcagccagtcattaatgagttcaaaaagtgctca
agtaaagcttatatcatttgctccaactcatcccacagagcaggtgtcggccattattct
ctgagcgtaaaatcatacacacaagcatcatcacccatacggcggtacatggatattgtt
ttgcaaagacttctgcactccgtcatctgtaacaagcatacacaatacactgcaacagag
attacagatttgtgcaattactttgagagcaacatcaaatgtgccaaagctcgtgaacaa
aaggctgagcagatctcctatgcagtgagcatgagcaagcaaagtgcttcgaagatagcc
tttgtcgtgagcgcagaccctaacacagaaagttttgctgtgtcatttccttttaacaaa
aacatatttgaacaaagtttggaaattatgtacagagacttacaactgtgggaccaacca
ttgtatgatgaagaaaatcactgcattactcttacatggaaaagagtcatctattcaagc
gcctccatgcaacgagagctaaaaatgccattcagtggtccctgcgttgaccttcctctg
acaatttgggaagccgctattgaagcaattgaggaagaggacttcgatcaggcaaagcgt
ctcattctgagcatcaatacagatcaaatgggagaacaaaataaccagatgcctcttccc
gagacaaacacttgtgtttctgtggaggtacagacaccaaaagtacaaaatgatcacgaa
gttgacataaacatgcagttgcaagcaggtgatacccttcgtgtccagttgacatcagag
ataaaaagaggttacaacatgcctaccattcagctggtgcgcattaaaccacactttgag
atttgtgtggatcatgtccacagacctatttactgcttctccagatctacagacgatcca
tcaaggaatcattacagcaatccgcaggagtatgtccggatatggaaaccgttgtgcgag
atggaatcggctgccactgcagtggatgaaggtgacagcgtaattatcgaggacttggag
atagacttcatacaagaaaaggaagacacactgacaggaagtttctttttatcaaaggcg
tggattgatgacatggactttgaatggaaccttttaaggtgcttgctgtgtatacggaaa
agggggttactgttacccacacccttgaaacattctgcagcggtagatccaaaagatttc
acatgggtggcccatgctgtgtcaagaaaggtggaagaaaggaaaaaccctgaaaattca
ggaattgaagtggagttctatgttaatcacttgccaatggagacaattccagattgtgtc
tttcagaaaaaaacccttttcacagttgaaataatcccaaaactgattcctgacatccgt
aaagaagatgcagtcaccaatgttctcactgcatgtcatcttgtcacagctgtagcagtt
ggacaacacattccaaaagaggtaaatgcaacatggtacaacatcagcaggactctacca
actagactgccaacgcttaatgacagtcagcgtctggctgtggttcgagctctaaatagt
accttcacacttatacagggaccacctggcactggaaagacgattgtcggtgtgtatatt
gtgaagcatttctttgaactgaattctaagagcccgaggaaatttgttcatctgaaggat
aaaaacaagaaagaagttattctctactgtggcccatccaacaagtccgttgatgtcgtt
gcagaattcctcttaaagtttggcgatgagctaaaactcctcagggtttacagccaacaa
gtggagatgcttgattacccgtatccggtctccacacttcagttttcgtctcttcgccat
gaacgtgccaaaccagagctcaggggcatcacattgcatcaccgcatgcgagaggaccag
aacccatattcacatgaaattaaacagtttgatcaacgcatgcaacgagcccttgagcaa
aagataataccagctgaagagataaaggaatacaaagcgcttcttagagcggctcgaacc
catgagtttgaacatcatgatgtcatactgtgcacatgtacacaggcttccaccccaggg
ttaaataaggtggtcagtgcccgtcagatcctcattgatgaatgtgggatggccactgaa
cctcaggccctgattccattagtctgcaacaatccagaaaagattgtattgatcggggat
cacaaacagttacgacccattgtgaaaaaccctcgcgttaggatgctgggaatggccagg
tctctgttcgaacgctgccatacgatgcacgagaaaaggacagtgatgctgaacacacag
tacagaatgcatgtggacatatgcaagttcccatccagtcaattttatgagggaaagctg
aaaactggagtggagcagccacagagtgtactatgtgttgaaaaacgaaggatgccaatc
gtctttggagacatcgaaggaacaacggtcagtctggtcgtgtccacagccaggggaaac
gagagatcgaaagcaaacgagcaagagagacaaaaagcgattgacgttgctgaaaaattg
gtgaaagcagccaaagtcgaacagcgaagtattgcgattttgtcgccctataatgcccaa
gtggccgaaatcaaagacgatctgaggaacaagaagatggaggaaatcactgttgccaca
atcaccaaaagccaaggaagcgaatggcgttacgtcatcatatcgaccgtgtgctctctg
ccacgtaaggagatcgaacgggagactgacccggatggagcttggctttccaaacatttg
ggcttcgtgggtgatcccaatcagatcaatgtggccatcaccagggccaaggagggactg
tgcatcctgggaaaccaaaggctgctatactgtagcagaacatggaaaaaccttctggac
cactacacgtgtcacagtgcagtaaccaatgcagacaggatctctgtgctgtgtgcctga
DBGET
integrated database retrieval system
