Antennarius striatus (striated frogfish): 137594971
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Entry
137594971 CDS
T10427
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137594971 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
astr03021
]
137594971 (smarcc2)
03036 Chromosome and associated proteins [BR:
astr03036
]
137594971 (smarcc2)
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137594971 (smarcc2)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137594971 (smarcc2)
PBAF complex
137594971 (smarcc2)
GBAF(ncBAF) complex
137594971 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
137594971
NCBI-ProteinID:
XP_068170805
LinkDB
All DBs
Position
5:complement(14607239..14620808)
Genome browser
AA seq
1077 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASGSHIVVP
LPTSLEEEEWVRPVMKRDKQMLLHWGYFPDSYDTWIPASEVEASVEDPPSPEKPRKVHGK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDMDEASPVPASEEGNPAKTN
NTKKDSDSTPVKGGTDIDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQVCRTTETNDRSIQTFFRGCFKFLSVPQTPAAQQMLPFPDKVKDKPSDLQNFGL
RTDMYSKKTCSTKSKSSASSMRDWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECIL
HFLRLPIEDPYLEDTSSTLGPLAYQPIPFSQAGNPVMSTVAFLASVVDPRVASAAAKSAL
EEFSRMKEEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGERPDESSDE
SKSDSQSSEDKREAKESKEAAAEEEEKQVENGKKEEERGREQEVERETDKTDSEMGDGEK
EKDRKESTEEGQRESESEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEM
RARQQHFQQIQHQQHSQAGAPHSNQAASGPPPQSQNSTQPSHSTPAPQPAPSPAPPASSS
SAPESQPPQAVHASPSCPPGQATASHSSSSSVPVLHESNAPVSGETLHPSAPVPPPQ
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatact
gtttctcagtttgataatgtccgtgtctggctgggaaagaattacaaaaagtacatccag
gctgagccgcccaccaacaagtccctgtccagcttggtggtccagctgctacagttccaa
gaggaggtgtttgggcgacatgtcagcaaccctccgctcaccaagctgccgatgaagtgt
tttctggacttcaagtcaggaggggctctatgtcacatcctggctgctgcctacaagttc
aagagcgaccagggatggcgcaggtttgacttccagaatccatcgaggatggaccgaaat
gtggagatgttcatgacgatcgagaagtccttggttcagaacaactgcttgacgagacct
gtgatctacctgagccctgacatcgagccaaaattgctaggaaaactgaaggacataatc
aaaagacatcagggctcagtgacagaggacaaggcttcaggttcccacattgtcgttcct
cttcccaccagccttgaggaagaggagtgggtgcgacctgtgatgaaaagggataagcaa
atgctgcttcattggggatatttccctgacagttatgatacctggatcccagccagtgag
gttgaggcttctgtggaggatcctcccagcccagaaaagccaaggaaggtccatgggaag
tggattttagacctggaccagtataacgagtggatgaatgaggaggactatgaggtaggg
gagggctgccccaagaggaaaagaatctcagccaagaccctgacagatgaggtgaccacg
cctgatgagagaagggacaagaagcctggcagcgccaagaagaggaagcgctcgccatca
ccctcccccacccctcccccgcaggagagcaaaaagaaaaacaccaaaaaggggccaacg
actccatacaccaagtctaaacggggccagagggaggaggagcaggaggatctcagtaag
gacatggatgaagcgtcgcctgttccagcatctgaagagggaaacccagcaaagaccaac
aacaccaagaaggactctgattcaacgccagtcaaaggaggaacagacatcgacgaacaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctccgagtgtgaag
ggggaacccgtgaaaggctcagacctccatgaggacaatgtgacagagcaaactcatcac
attattataccaagctacgctgcctggtttgattacaacagtgttcatgccatcgagcgc
agagccctgccagagttcttcaatgggaagaacaaatccaaaacccccgagatttatctg
gcataccggaacttcatgattgacacctaccggctaaaccctcaggagtacctgacctcc
accgcttgtcgcagaaacctggcaggagacgtgtgtgcaatcatgagagtgcatgccttt
ctggagcagtggggtctgatcaattaccaggtggactctgagagcagaccaacacccatg
ggtcccccacccacctctcacttccatgtactggcagacactccctccagcttggtgccc
ctgcagccaaagacatctcaggtctgcagaaccacagagacaaatgatagatccattcag
acattttttcggggttgttttaaatttctctctgtgccacagactcctgctgcccagcag
atgttgcccttccctgataaagtgaaggataaaccatcagatctgcaaaactttgggctg
cgaactgacatgtacagcaagaagacttgctctacgaagagcaagagctcagcgagctcc
atgagggattggacagaacaggaaacactactactgctcgagggcttggagatgtacaag
gatgactggaacaaggtttcagaacatgtgggcagccgcacacaggacgagtgcatcctt
cacttcctgcggctgcccattgaggacccttacctggaggacacctcctcaactctggga
ccattggcctaccagccgatacctttcagccaagcaggaaacccagtcatgagcaccgtg
gccttcctggcctctgttgttgacccccgcgttgcttcggctgcagctaaatctgctctg
gaggagttctctcgtatgaaggaggaggttcctgcagcgctggttgaagctcatgtgcga
cgggtggaggaagcagcgagggtcagcggccgacaggaccctctgtacggcctggagggc
agcgggattgctggcaccggtctggaggagggagaaagacctgatgaaagcagtgatgaa
agtaagagcgacagccagtccagtgaagataagagagaggccaaggagagtaaagaggct
gcagctgaggaagaggaaaagcaggtggagaatgggaagaaggaagaagagagaggaaga
gaacaagaagtagagagggaaacggataaaacagattcagaaatgggtgatggggagaag
gagaaggataggaaagagagcacagaggaaggacaaagagaatcagagagtgaaggagaa
cggaaagcgaaagtggagcgggatgttggagagggaaacctggccactgccgctgcatct
gcactcgctgctgctgccgtcaaagccaagcatctggctgcagttgaagagaggaagatc
aaatctctcgtggctctgctggtggagacccagatgaagaagctcgagattaaactgaga
cattttgaagaactggagaccatcatggaccgagagagggaggctctggagtaccagcgt
cagcagctcttagccgaccgtcagtccttccacatggagcagctgaaatatgctgagatg
agggcccgtcagcagcacttccagcagattcagcaccagcagcacagtcaggcaggagcc
ccccattctaaccaggcagcctcaggcccacccccgcagagccagaattcaactcagcca
agtcatagcacaccagcgccacagccagcccccagcccggcacctccagcctcctcctcc
tcggctccggagtcccaacctccacaggctgttcacgcctcgccctcctgccccccaggc
caggccacggccagccactccagctctagctctgttcctgttctccatgaatctaacgca
cccgtctccggggaaacactccacccctcggctccagtcccacctccgcagtga
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