Antennarius striatus (striated frogfish): 137595965
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Entry
137595965 CDS
T10427
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137595965 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
astr03021
]
137595965 (smarcd1)
03036 Chromosome and associated proteins [BR:
astr03036
]
137595965 (smarcd1)
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137595965 (smarcd1)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137595965 (smarcd1)
PBAF complex
137595965 (smarcd1)
GBAF(ncBAF) complex
137595965 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
137595965
NCBI-ProteinID:
XP_068172452
LinkDB
All DBs
Position
5:3087632..3101465
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGGFPTAPTGGSGGAMGPGPPVPGAGPGMGPGTPSGRMGPASAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTGVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAKEAVGRYFFSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggtttcccgacggcaccgacaggaggtagtgggggagcaatggga
cctggaccaccggtaccgggcgcaggaccaggcatgggccccgggacgccctccggaaga
atgggaccggcgtcggctgcgcagaaccacatgtatcgctccccaatgcccgggcctgga
tacccgaggccgggcatgcctccatccagccgtatgacaccacagggaccggccatgggc
cccccaggatatggcagcagcccagtgtctcgtcctgtgatgcctggtgtgatggacccc
tctcgcaagagaccggccccccagcagatacagcaggtgcagcagcagaatcgcaaccag
cacacaaagaagaagaagatggctgataagattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggcttttgagagaaagcttgaccagaccatc
atgcgcaagaggctggatattcaggaggccctcaagaggcccattaagcaaaaaagaaaa
ttgaggattttcatatcaaataccttcaaccctgcaaagccagatgctgaggatggagaa
ggcacagttgcatcatgggagctgcgtgttgaggggcgtctgctggaagatacgggcgtg
tctaaatacgaagccaccaaacagaagcgcaagttctcctcttttttcaagtctctggtg
attgagttggacaaggacctgtatggaccagataatcaccttgtggaatggcacaggacc
gccaccactcaggagaccgatggcttccaagtgaagaggccaggtgatgtcggtgttcgc
tgcaccgtcctgctaatgctcgactaccagccccctcagttcaagctggacccccgtctt
gctcggatgcttgggatccacacccagaccagaccggtcatcattcaggccctctggcag
tatgtcaagacccacaagctccaagaccctcatgagcgcgagttcatcaactgtgacaaa
tacctgcagcagatttttgagactcagcgaatgaagttctctgagatcccgcagcggttg
cacgccctcctgatgcctccagagcccatcatcataaaccacgtgatcagcgtggacccg
aatgaccagaagaagacggcctgctatgatatagacgtggaggtagacgacaccctgaag
acccagatgaactccttcctgctctccacagccagtcagcaggaaatagcaggactggac
aataagatacatgaaacgatcgagacgatcaatcagctgaagacccagagagagttcatg
ttgagttttgccagagatcctcagggctttatcaacgactggctgcagtcccagtgcaga
gacctcaagaccatgaccgatgtggtaggaaaccccgaagaggagcgcagagcggagttt
tactaccagccgtgggctaaggaagcagtcggtcgctacttcttctctaaggtgcagcag
aggcggcaggagctggagcaggcgctcggcatcaggaacacctaa
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