Antennarius striatus (striated frogfish): 137596032
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Entry
137596032 CDS
T10427
Symbol
col2a1b
Name
(RefSeq) collagen, type II, alpha 1b isoform X1
KO
K19719
collagen type II alpha
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
Brite
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137596032 (col2a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
137596032
NCBI-ProteinID:
XP_068172549
LinkDB
All DBs
Position
5:complement(8119624..8168295)
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AA seq
1490 aa
AA seq
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MFSFMDSRTLLLLVAAQVCLLTVVRCQEDDQDGAFSCMQDGQRYSDKDVWKPEPCRICVC
DTGTVLCDEIVCEELRDCPKPEIPFGECCPICAADQSPSIGTPGAKGQKGEPGDITDVVG
PRGPAGPMGPPGEQGHRGPRGEKGERGSVGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGG
NFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGSPGPQGFQGNPGEAGEPGQSG
PMGPRGPLGAPGKPGDDGEAGKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLDG
LKGETGALGAKGEAGSPGENGTPGPMGPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPG
PVGPSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPG
AKGSSGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIAGFKGETGPKGEIGPHG
LQGLPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGIAG
ASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG
QPGVMGFPGPKGATGEHGKSGEKGLGGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG
QPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEGGAAGATGPRGERGFPGERGAAGTQGLQG
PRGLPGTPGTDGPKGAIGPAGSGGAQGPPGLQGMPGERGSAGIPGPKGDRGDIGEKGPEG
ASGKDGARGLTGPIGPPGPAGPNGDKGESGPAGPSGAAGTRGAPGDRGETGPPGPAGFAG
PPGADGQPGIKGEQGEGGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPSGATG
FPGAAGRVGPPGPNGNPGPAGPAGAPGKDGPKGVRGDGGPPGRQGDAGLRGAAGASGEKG
DAGEDGPPGPPGPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGSPGGSGDRG
PPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSTGIKGDRGNTGPAGAPGAPGAPGAPG
PVGPTGKQGDRGESGAQGPAGPSGPAGARGMPGPQGPRGDKGEGGESGERGQKGHRGFTG
LQGLPGPPGQAGDQGATGPSGPSGQRGPPGPVGPAGKDGGNGLPGPIGPPGPRGRSGETG
PSGPPGNPGPPGPPGPPGPGIDMSAFAGLGQTEKGPDPLRYMRADQASGNLRQHDAEVDA
TLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCNM
ETGESCVRAKPSSIPRKNWWSSKSKDLKHVWFGETMNGGLHFSYGDDTLAPNTASIQMTF
LRLLSTEASQNLTYHCKNSVAYMDASTGNLKKAVILQGSNDVEIRAEGNSRFTYSVIEDG
CTKHTGQWGKTMIEYRSQKTSRLPIVDIAPMDIGGANQEFGVEVGSVCFL
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttatggattccaggactctattgctacttgtagcagcccaagtctgtcta
ttaaccgtggtgagatgtcaggaggacgaccaggacggtgcttttagctgtatgcaggat
ggacagcgctatagcgacaaggacgtatggaagccagagccttgtcgcatctgtgtgtgt
gacactggaaccgtcctgtgtgatgaaattgtctgcgaggagctaagagactgtcccaaa
cctgaaatcccttttggagagtgttgccccatctgcgccgctgaccagtcgccatccatt
ggaacacctggagctaagggtcagaaaggtgaacctggagacattactgatgttgtagga
ccaagaggaccagctggcccaatgggcccaccaggagagcaaggacaccgtggaccgaga
ggagagaaaggggagaggggaagtgttggtccccgtggcagagatggtgagcctggcaca
cccggaaaccctggcccccctgggccccctggacctaatggacccccaggccttggtggg
aactttgctgctcagatggctggtggttttgatgagaaggctggaggtgcacagatgggt
gtgatgcaaggaccaatgggccccatgggtccccgaggaccacctggccccactgggtca
cctggcccacaaggtttccaaggcaacccaggagaggctggagagcctggacagtctggc
cccatgggcccccgtggccctcttggagcacctggaaaacctggagatgatggagaggct
ggcaaaccaggcaagtcgggtgagcgtggaccgtctgggcctcagggagcgcgtggattc
cctggaactccaggcctgcctggcatcaagggacacagaggttatccaggcttggatggt
ctaaagggagagactggagccctgggtgctaagggtgaagctggttcccctggagaaaat
ggcactcctggaccgatgggacctcgtggtttgcctggtgagagaggccgccctggatcc
agtggcgctgctggagcacgtggaaatgatggtttgcctggtcccgctggtcctcctggc
ccagttggtccctctggagctccaggcttccctggctctcctggttcaaagggagaagct
ggtcccactggtgctcgtggacctgagggggctcaggggccccgaggagaatctggcact
cccggatcacctggaccttctggtgcctctggaaaccctggtactgatggcatccctgga
gcaaaagggtcatctggtggtcctgggattgctggtgctcctggtttccctggacctcgc
ggtcctcctggtcctcagggagcaactggacctcttgggcccaaaggaacatctggagac
ccaggtattgcaggcttcaagggagagactggacccaaaggagaaattggaccacatggt
cttcagggacttcctggcccacaaggagaagaaggaaagagaggaccccggggggagcct
ggtgctgctggaccacttggacctccaggagagagaggagcccctggtaacagaggattc
ccaggtcaagatggtctggctggtcctaagggagcccctggtgagcgtggaattgccggt
gccagcggtcccaaaggtgccaacggtgaccctggccgccctggagagtctggtctgcct
ggtgccagaggcctgactggacgccctggcgatgcaggtcctcaaggcaaagttgggcca
tctggagcccctggtgaggatggtcgtccaggcccccccggcccacagggagcccgtgga
cagcctggtgtcatgggattcccaggaccaaaaggagcaactggtgaacacggaaagtct
ggtgagaaaggactgggtggagctcctggtctgagaggtttgcctggcaaagatggagaa
actggagccgctggaccccctggccctgccggtcctgctggagaaagaggagagcaagga
cagcctggtccttcaggtttccagggtcttccaggacctcctggcccccctggagaggga
ggcaagcctggagatcagggggttcctggagagggaggagctgctggagccactggaccc
agaggagagcgtggtttcccaggagagagaggagctgctggtactcaaggtctgcaggga
ccacgaggtctgccgggaacacctggaactgatggacccaagggagccattggacctgct
ggttctggtggagctcaaggacccccaggcctgcagggaatgccaggagaaagagggtct
gctggcattccaggtcccaaaggagacagaggtgacattggagagaaaggacctgagggt
gcttctggaaaagatggtgctcgcggtctcactggtcccattggtcctcctggtcccgct
ggtcccaatggtgacaagggtgaatctggtcctgctggtccttctggagctgctggtact
cgtggtgctcctggggacaggggtgagactggacctcctgggcctgctggatttgctgga
ccccctggtgctgatggtcagccaggaatcaagggagagcaaggagaaggtggacagaaa
ggtgatgctggtgcccctggaccccaaggaccatctggtgcccccgggccagcaggcccc
acaggtgtttctggacctaaaggtgcccgcggtgctcagggaccatccggcgccactggt
ttccctggtgctgctggccgtgttggaccccctggtcccaatggtaatcctggacctgct
ggtcctgccggtgctccgggtaaagatggaccaaagggtgtgagaggagacggtggcccc
ccaggcagacagggtgatgctggactccgtggagctgctggggcttctggagagaaggga
gatgctggagaggatggtcctccgggtcctcctggtccttcaggccctcagggtttgggt
ggtcaacgtgggattgtcggtctgcctggacagcgtggtgagaggggcttccctggtctg
cctggaccctctggtgagcctggaaagcagggtagtcctggtggcagtggagaccgtgga
ccccccggacctgttggaccacctggactcactggacctgcaggagagcctggcagagag
ggaaaccctggatccgatggacctcctggtagagatggttctacaggaatcaagggtgat
cgtggtaacactggtcctgctggtgctcccggtgctccaggggctcctggtgctcctggt
ccagttggtcccacaggcaaacagggagacagaggagagtctggagcacaaggacctgct
ggaccttcaggacctgctggagccaggggaatgcctggacctcaaggaccccgtggagac
aagggtgagggtggagaatctggtgagagaggacagaagggacacagaggcttcactggt
ctgcagggtctgcctggacctccaggtcaagctggagaccagggtgctactggaccttct
ggaccttctggacaaagaggtccacctggacctgttggcccggctggaaaggatggagga
aacggtttgccaggacccattggaccccctgggccccgcggtcgcagtggagagactggc
ccctcaggtccccctggaaacccaggaccccctggtcctcctggtccccccggtcctggc
attgacatgtctgctttcgctggtctcggtcagactgaaaagggccctgatcccctcagg
tacatgagggccgaccaggcttctggtaacctccgtcaacatgatgctgaggtcgatgcc
acactcaagagtctcaacaaccagattgagaacatccgcagcccggagggatccaagaag
aacccggctcgcacctgcagagacctgaagctttgtcatcccgactggaagagcggagag
tactggattgatcccaatcagggctgcactgttgatgcaatcaaggtcttctgcaacatg
gagacaggggagtcctgcgtccgtgctaagccttccagcatccctcgcaagaactggtgg
tccagcaagagcaaggacctcaaacatgtctggtttggagagacaatgaatggaggactc
catttcagctacggtgatgacaccctggcaccaaacactgcatccattcagatgaccttc
ctgaggctgctgtccactgaggcttctcaaaacctcacctaccactgtaagaacagcgtg
gcctacatggatgcctcaacagggaacctgaagaaggccgtgatcctgcagggatccaac
gatgtagaaatcagagccgagggcaacagtcgcttcacttacagcgtgatagaggacggc
tgcacgaaacacacgggacagtggggcaagacaatgattgagtacagatcacagaagacc
tctcgtctgcccattgtggacattgcccccatggatattggtggtgcaaatcaggagttt
ggagttgaagttggttcggtctgcttcttgtaa
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