Antennarius striatus (striated frogfish): 137596378
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Entry
137596378 CDS
T10427
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137596378 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137596378 (prpf8)
Spliceosome [BR:
astr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137596378 (prpf8)
Complex C
U5 SnRNP specific factors
137596378 (prpf8)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
DDE_Tnp_1_7
U5_2-snRNA_bdg
RRM_4
Motif
Other DBs
NCBI-GeneID:
137596378
NCBI-ProteinID:
XP_068172950
LinkDB
All DBs
Position
6:4272467..4294334
Genome browser
AA seq
2595 aa
AA seq
DB search
MAATFAYRGVPPAMPPGVPPPAPVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSSCAEWLYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQIPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNKYENRPGPSTRRPGPSTRRPGPSTRRPGPSTLRPGPSTRRPG
PSTQRPGPSTRRPGPSTRRPRKRVHGRTAQTRGSFPQTRPHHALKPWRTGDDPDTAPQVS
RFVPRRTPGAQVDSHAIHSPLELFQLYFSPSTLRTLCDNSNKQAARNKAMGKKYKWTDVD
CEELCKVLGLLIYTSLVSVCSINDYWKRASLTSVPLPASIMPRDRFRAVLSNIHPSDPEE
DEKNEARKGTPEYDKLFKLKPLMNELIIACKAHYHPRRELAVDERMVATKAKTGMTQYMK
NKPTKWGFKLFVLADSSNGYTINFNIYIGKKYTETVHGLAYDAVMDLIQPSYLGTGYHVY
MDNFYSSPQLFLKLNEMKFGACGTYRDNRKGCPTQRANALPKKSERGEIRWVRKGSLVFV
KWMDTREVSVCSTIHPAVSGEVIRRRVKDEDGSWSVKEIPCPSPVIAYNKYMGGVDRSDQ
LLQYYSTHRKTALWYRTIFLHLLDIATTNAYLLHCDISKSHQVKPLAHKNFQAELVAQLC
QVDLSGIPARKSTNHVPVGVAVVADPSKMATQGRRICQQCHQVYQRRNLTPWKCKACDVA
LCVILNRNCFEEWHK
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccttcgcctatagaggggtccctccagctatgccacctggcgtacctcct
ccggctcctgttccggactacatgactgaggaaaagctgcaagagaaagcaaggaaatgg
cagcaattacaggcgaaacgttattcagaaaagagaaagttcggctttgtggatgctcag
aaggaagacatgccacctgagcatgttcggaagatcatcagggaccatggagacatgaca
aatagaaagtttcgccacgacaagagagtataccttggtgcactcaagtacatgccccat
gctgtgctgaagctgttggagaatatgcctatgccctgggaacagatcagagatgttcct
gttctctaccacatcactggagcaatttcctttgtgaatgaaatcccctgggtgatagaa
ccggtctatattgcacagtggggaaccatgtggatcatgatgcgtcgtgagaagcgtgac
cgtcgacacttcaagagaatgcgctttccaccttttgatgacgaggagccaccgctagac
tatgctgacaacattcttgatgtggagccattagaggccatccagatggaattggatcct
gaggaagactcctcgtgtgcggagtggttgtatgagcatcagcctctcaaagacactacc
aagtttgtgaacggaaccacctaccgtcgctggcaattcacactgcccatgatgtccaca
ctgtaccgtttggccaatcagctgctgacagacctggtggatttcaattatttttatctc
ttcgacctgaaggctttcttcacttccaaggccttaaatatggccattcctgggggacca
aagtttgaaccactggttagagacatcaacctccaagatgaagactggaatgaattcaat
gacatcaacaagatcatcatccggcagcctataaggactgagtacaaaattgccttccct
tacctctacaacaacttgccacaccacgtccacctcacttggtatcacacacccaacgta
gtgtttatcaagacagaggatccagatctccctgccttctattttgacccactgatcaac
ccaatttcacacagacattctgtcaagagtcaggagcctttgcctgatgatgatgaggag
tttgagcttccggagtatgtggagcccttccttaaggagacccccctctacacagacaac
acagccaatggcattgctcttctctgggcaccgagacccttcaacctccgatccggacgc
acaagacgtgccattgatatccccttgataaagaactggtaccgtgagcattgccctgca
ggacagccagtgaaggtgcgtgtgtcataccagaaactgctcaaatactacgtcctcaat
gctctcaaacacagaccccccaaggctcagaaaaagaggtatctgttccgctccttcaag
gccacaaagttctttcagtctactaagttggactgggtggaggtgggtcttcaggtttgc
cgacaaggctacaacatgctcaatctgctcattcaccgtaagaatctcaactacctgcat
ctggactacaacttcaatttgaagcctgtcaagacactgaccacaaaggaaagaaagaag
tccagatttgggaatgccttccacttgtgcagggaggtgctgcgtctcagcaaactggtg
gtagacagccatgtgcagtacagactgggaaatgttgatgcctttcagttgtctgatggg
ctgcaatacatcttcgctcatgtgggtcagctgacagggatgtaccgctacaagtacaag
ctgatgagacaaattcggatgtgcaaagatttgaagcatctcatctactaccgcttcaac
actggtcctgtaggcaaggggccaggttgtggcttctgggctcctggttggagggtgtgg
cttttcttcatgagggggatcactccactgttggagaggtggctggggaatctgctggcc
aggcaatttgaaggacgtcactctaaaggcgtagcaaagacggttaccaaacagcgtgtt
gagtctcactttgatcttgagttgcgtgctgctgtgatgcatgacattttggacatgatg
ccagagggcatcaaacagaacaaggctagaaccatcctgcagcacttaagtgagtcttgg
agatgctggaaggccaacattccctggaaggtgccaggtctaccgacgcccattgagaac
atgatcctgcgctatgtgaaagctaaagctgactggtggacaaacactgctcactataac
cgtgagcgaatccgccggggggctactgtggacaaaacggtgtgcaagaaaaacctgggg
agattgactcgtctgtacctgaaagctgagcaggagagacaacacaactacctgaaggat
ggtccctacatcacagctgaagaggcagtggccatttataccaccactgttcactggctg
gagagtcggaggttctctcctatccccttccctccgctgtcctacaagcatgacaccaaa
ctgctcatcctggccttggagaggctgaaggaggcatacagtgtcaagtctcgtttgaac
caaagtcagagggaggagctggggctgatcgagcaggcatatgacaaccctcacgaggct
ttgtccaggatcaaacgtcacctgctcacacagagagccttcaaagaggtgggcattgag
ttcatggacttatacagtcatctggtgcctgtttatgatgtggagcctctggagaagatc
actgatgcctacttggaccagtacctgtggtacgaggctgacaagagacgcctgttccca
ccttggataaaacctgccgacactgagcctccaccactgctggtgtacaagtggtgccaa
ggcatcaacaacttgcaagatgtgtgggaaactgcagaaggagagtgtaatgtgatgctc
gagtcccgctatgagaaaatgtatgagaagattgatctgacactgctgaacaggctgctg
cgtcttattgttgatcacaacattgctgattacatgacagccaagaacaacgttgtcatc
aattacaaggatatgaaccacaccaactcctatggtatcatcaggggactccagtttgcc
tcattcattgtacagtactatggcctggtgatggaccttctggtgttgggcctgcatcgt
gccagtgaaatggcggggccacctcagattccaaatgacttcctcagttttcaagacacc
gccacggagagcgcccacccaatccgactgtactgtcgctacatcgaccgcattcacatc
ttcttcaggttctctgctgatgaggccagagatctgattcagagatacttgacagaacac
cctgaccccaacaatgagaacatagtgggctacaacaacaagaagtgttggccacgtgat
gcccgcatgagactgatgaagcatgatgtcaaccttgggcgtgctgtgttctgggacatc
aagaaccgccttccccgatcagtgaccactgtccagtgggagaacagctttgtttctgtg
tacagcaaagacaaccccaatcttctcttcaacatgtgtggctttgaatgccgtatttta
ccaaagtgccgcaccagttatgaggagttcactcacaaggatggtgtttggaacctgcag
aatgaggtgaccaaagagaggactgcacagtgcttcttgcgtgttgatgatgaatcgatg
caacgcttccacaacagagttcgtcagatcctaatggcctctggatccaccacattcact
aagattgtgaacaaatggaatacagcactgatcggtctgatgacatatttccgtgaggct
gtggtcaatactcaggagctgctggacctgctagtgaaatgtgagaacaagatccagaca
cgtatcaagattgggctcaactccaaaatgcctagccgcttcccccctgtggtcttttac
accccaaaagagttgggtggtcttggtatgctgtccatgggccatgtgctcattccacag
tccgatctgaggtggtccaaacagacagatgtaggtatcacccacttcaggtcaggaatg
agccacgaagaagaccagctgattcctaacctgtatcggtacattcagccttgggagagt
gagttcatagactctcagagagtttgggccgagtatgccctaaaaagacaggaggccatc
gcccaaaacaggcgcctgaccctggaagatctggaggactcgtgggacagaggaatccct
cgtattaacacacttttccagaaggacaggcatacgctggcatacgacaaaggctggaga
gtcaggacagacttcaaacagtaccaggtgctgaagcagaatcccttctggtggacgcac
cagagacatgatggcaaactgtggaacctgaacaactaccgcacagatatgatccaggct
cttggtggtgttgaaggtatcctggaacacactctcttcaaaggcacttacttccccacc
tgggagggtctattctgggagaaggccagtggctttgaggagtccatgaaatggaagaag
ctgacgaatgcccagaggtctggactgaaccagatccccaaccgtcgcttcactctttgg
tggtcgcccacaatcaacagagccaatgtttatgtgggtttccaggtgcagcttgacttg
acgggaatctttatgcatggcaagattcccactctcaagatttccctaattcagatcttc
agggctcacttgtggcaaaaaattcacgagagtatcgtcatggatctttgccaggtgttt
gatcaggagttggatgctcttgagattgagacggtgcagaaggaaaccatccaccccagg
aagtcatacaagatgaactcgtcctgcgcagacattctcctctttgcatcatacaagtgg
aacgtctctcgaccatctctgcttgcagactccaaggatgtgatggatagcaccaccaca
cagaagtactggattgacattcagttgcgttggggtgactatgactcgcatgacatcgag
cgctacgccagggccaagttcctggactacaccactgacaacatgagtatctacccctct
cccactggagtgctaattgccatcgacttggcttacaatctccacagcggctatggtaac
tggttccctgggagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaaaggtctgcagctgtactcgtctgag
cccactgagccttacctgtcctcacagaactatggtgaactcttctccaaccagatcatc
tggtttgttgatgataccaacgtgtaccgagtcaccatccacaagacttttgagggtaac
ttgaccacaaaaccaatcaatggagccattttcatcttcaaccccaggactggacaactc
ttcctcaagatcattcacacatctgtgtgggctggacagaaacgtctgggacagttggcc
aaatggaagacagctgaagaagtggctgccctaatccgctccctccctgtggaagagcag
ccaaaacagattattgtaaccaggaagggaatgctggatcctctggaggtccacttgctt
gatttccccaacatcgtgattaaaggttctgagctgcagctccccttccaagcctgtctg
aaggtggagaagtttggagacctcatccttaaggccacagagcctcagatggtgttgttc
aacctttatgatgactggctcaagaccatctcatcttacaccgccttctcccgactgatc
ctgatcctcagagcgctgcacgtcaacaatgaccgtgccaaagtcatcctgaaaccagac
aagacgacgatcaccgagccccatcacatctggcccacactcaccgatgaagagtggatc
aaggtggaagtgcaactcaaagacctcattctggctgactatggcaaaaagaacaaatat
gagaataggcctggaccctctacacggaggcctggaccctctacacggaggcctggaccc
tctacacggaggcctggaccctctacactgaggcctggaccctctacacggaggcctgga
ccctctacacagagaccagggccctctacacggagaccagggccctctacacggaggccc
agaaagagagtgcatgggaggacagctcagaccaggggcagctttccacagactcggcca
caccatgccttgaagccctggagaaccggagatgaccctgacactgccccacaggtcagc
cggttcgtgcctagaagaacaccaggagcccaagttgacagccatgctatccactcaccg
ctggaactgttccagctgtacttctccccatccacactgcgtacattgtgtgataacagc
aacaaacaagcagctcgcaataaagcaatggggaagaagtacaagtggactgatgtggac
tgcgaggagctttgcaaggtcctcgggctcctgatttatacatctctggtgtctgtttgc
agcattaacgattactggaagcgggcctcactcacgtctgtgccgttaccagcaagtata
atgccaagggaccgcttcagggctgtgctgtccaacatccacccaagcgatccggaggag
gacgaaaaaaatgaggcaaggaaaggaactccggaatatgataaattgttcaagttgaag
cccctcatgaatgagctcatcattgcctgcaaggctcattatcacccaaggagggagttg
gcggtggatgaaagaatggtggccacgaaagcaaaaactgggatgacccagtatatgaag
aacaagccaacgaagtgggggttcaaactgtttgtgttggccgactccagcaatggctac
acaatcaatttcaacatttacatcggcaagaaatacacagaaacagtccatgggcttgcc
tatgatgcagtgatggacctgattcagccatcatatctgggaaccgggtaccatgtttac
atggataatttttattcatccccccagttgttcctcaagttgaatgaaatgaagtttgga
gcctgtgggacatacagggacaacaggaagggctgcccaacccagagagccaacgccctg
cccaaaaagtcagagaggggtgagatacggtgggtcaggaagggctccctggtcttcgta
aagtggatggacactcgggaggtgtcagtgtgctccaccatccatccagcagtttctggg
gaggtgatcaggaggagggtcaaggatgaagatggaagctggtcggtaaaagagatcccc
tgcccctccccagtcattgcatataacaaatacatgggtggtgtggatcggtctgaccag
ctgctgcagtattattcaacccaccgcaagactgcgctctggtaccgcacaatcttttta
cacttgcttgacatagccactaccaatgcctacctcctccactgtgacatcagtaagtca
caccaagtgaagcccctagcccacaagaacttccaggctgagcttgtggcccagttgtgt
caggtggacctgagtggcataccagcaaggaagagcaccaaccacgttcctgtcggcgtt
gctgtggtggcggaccccagtaagatggccacacagggacgcaggatctgtcaacagtgc
catcaagtgtaccaaagaaggaacctcaccccttggaagtgcaaggcctgtgacgtggca
ctgtgtgttattttgaacagaaactgttttgaagagtggcataagtga
DBGET
integrated database retrieval system
