Antennarius striatus (striated frogfish): 137596512
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Entry
137596512 CDS
T10427
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04270
Vascular smooth muscle contraction
astr04625
C-type lectin receptor signaling pathway
astr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
137596512 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137596512 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
137596512 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137596512 (arhgef12a)
Membrane trafficking [BR:
astr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
137596512 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
HEPN_AbiU2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
137596512
NCBI-ProteinID:
XP_068173220
LinkDB
All DBs
Position
6:7059080..7109758
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AA seq
1444 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTPLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPQDRVSSTPPLWDDNSSVFNQRVDFLQKMLSREQQELQVMKEKYSRNPSPKLLKD
IQEAKKHIPQLQGQLFRATGATQEAVPGGDADDGSMYEMENSPVSKGDNSTDQSWSNTPI
SSFGPGSPESLCPKESSFPSPKSTPRNSLNSCHSPEAEDATDLDSLSPTTVSSPSSSRLI
SPIIRAEDDYFDSEQEQTNGQCNSFNSMEQLKCRPAHLAAFLHHVISQFDPAPVLCYLYA
DFYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISVDLDRRRTELIPEEINRLHVQT
LQDSLLPDIQKNLEDFRQKRSMGLTVAEVELSRLDQERIRDRVTLERERSYAENIITKIE
DILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKAEKE
GEEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGASEHLEASRLRG
SQSSEGSELIHATPGNTSSPNNNNHSLETCRDTEIGGTPTSGPSRLSDGLQSDPLDGLPY
PATHFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEGLAAADVQSEDDQGTDSEHDPPYWQ
QLVGREVLAGLRPHEIKRQEVINELFYTERAHVRMLRVLDIVFYQKLSKEAILPPADIKN
IFTNLEEILHLHVSILEQMAAVRKRNESSVIDQIGDDLLCWFSGGEEEKIKLAVGTFCSN
QPFALEIIKTKQKKDSRFASFIQEAESNRLCRRLQLKDIIPVEMLRLTKYPLLLENISKY
TDNAVEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILEL
KNLDLTKKTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTA
DTKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLIIQR
ADAMKVKPHSVIPLPQTEGERDGVELITAGVSRLSRDSDRTSTGSTQSTDKESSLASRSG
LQSSPPGNNPFEGVKMEGEEEEEEEEEGFVDPEIPYQVAEDGKGDSFNMFPSRADEALKT
LAALKQVLVTQLMSQEASEQTKRSTGGRLLRTTSLRTPVDSRARVMVHNGSEKNSSQTED
LNLDPSSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDVMASNPGKQLRTSQGCAADSG
INLRFSSMSQGGSLSSLSRQVLSYLKNLQTNLIYLKEVEAKYNNLIKQRPEMSAADTDGN
KDKR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgacaaaacccctctt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtcatcatccag
aaagatgaaaatggctttgggcttactgtcagtggtgacaatccagtgtttgtgcagctt
gtcaaagaagatggtgctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gtcaatggaacccttgttacacattctaatcacatcgaggtggtgaagcttatcaagtcg
ggttcctatgtggccctcacagtgttggggcgtcctccagggcttgcccagatccctttg
tctgaagcagagtctgaaatgttgggtgttagtatttcctctccaaactccccagcagca
gaacgcccctacagtcctcaggaccgcgtctcttccactcccccgttatgggatgataac
agcagtgtcttcaaccagagagttgacttcttacaaaagatgctctccagagagcagcag
gaactgcaggtcatgaaggagaagtacagcaggaacccttcacctaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagcttttcagggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatgtacgagatggag
aactctcctgtctctaaaggagacaactctacagaccagtcctggagcaacactcctata
tcatcatttgggcctggatctccagagagcctgtgcccaaaagaatcctccttccccagt
ccaaagagcactcctaggaacagcttaaactcctgccactctccagaggcagaggatgcc
actgatctggattctctgtcccctaccacagtgagcagtccttcttcttctcgcctcatc
tcaccgatcattagagctgaggatgactattttgattctgagcaggagcagacaaatggc
cagtgtaacagctttaacagcatggagcagctcaagtgtcgacccgcccacctcgcagcc
ttccttcaccatgtcatctctcagtttgaccctgctcctgtgctgtgctacctctacgct
gacttctacaaacagaccaactccaaagagaccagacgggtgttcatggatcttcacacc
ttttttattgatcggggagcgaatttgaaagttgctgttcctgaaagcatctctgttgat
ctagaccgccggcgcacagagctgatcccagaggaaataaacagactacatgttcaaaca
ctgcaagactctctgcttcctgacatccagaagaaccttgaagacttcaggcagaagcgc
agcatgggactgacagtggctgaagtagagttgtccagactggatcaagagagaatcaga
gaccgtgtcactctggagcgagaacgctcatacgctgagaacatcatcaccaaaatagag
gatatcctgttaactactcagaccacagaggaagagaaatgcactacaatgcagtatgtc
atctatacgtacatgaagcacctgggtgttagggtcaaggaacctcgcagtctggaatcc
aaaagggtcaggatcaactttctccctaagatcaagaaaagcatcaaggcagaaaaggaa
ggtgaggagaaggtgaagaaaccaagatttcccagcattcttgggcctcagcgtcgacct
agtcgtattgaagcagcatcagtgggtaaagccttggatggtcgcccgcggcctcaaaag
cagttgtctcagcccaccctgggggcaagtgagcacttggaagctagtcgtctgagaggc
agccaatcaagcgagggctctgaactcattcatgccacgcctggcaacacttcatctcca
aacaataacaaccacagtttagagacttgccgagacactgaaataggtgggacaccaacg
tcaggcccatccaggctgagcgacggccttcagtctgaccctctggatgggttaccttat
cctgctacgcactttgacctttacagcctcgaccaactgcaagaggatgacagagaaagt
gacagagcccatgagggaacaccaaaggccataaggagacttgagggactggcggctgct
gatgtccagagtgaggacgaccagggaaccgactctgagcatgacccaccatactggcag
cagcttgtggggcgggaggtcctggccggtctcaggcctcacgaaattaagcgacaggaa
gtcatcaatgagctgttttacacagagcgtgcgcatgtccggatgctcagagttttggac
atcgtattttatcagaagctttccaaagaggccatcctacctcctgcggacatcaagaac
atctttaccaacctggaggagattctacatctgcatgtttccatactggagcaaatggca
gctgtacggaagagaaatgagtcttcagtaattgatcagataggagacgacttgctatgt
tggtttagtgggggggaggaggagaagatcaaactggcagtggggaccttctgcagcaac
cagccatttgctttggagatcatcaaaaccaaacagaagaaagactcgcggtttgcttcc
ttcattcaggaggcagagagtaacagactgtgtcgccgactgcagcttaaggacatcatt
cctgtagaaatgctgcgactcacaaagtaccccttactactagagaacatctcgaagtat
acagataatgcagtagaaaaggataaagtgaagcaggcagcagactgctgtagaaaaatc
ctcaatcacgtcaaccaggctgtgaaggaatctgaggacaagcagaggctggaggactat
cagaggagactggacctctcttcactgaagcagacagacaatccgatgatcttggagcta
aagaacctagatcttaccaagaaaacgatggttcatgagggacccctgtcatggaaagtg
aacaaggacaaaactattgagctgtacacactcctcctagaagacatacttgttttgctg
cagaagcaagatgagcgtctgatcctcaagtgtcacagtaaaaacctggcaggcacagca
gataccaaacacatcttcagccccatcatcaaactaaacactgtgctggtgcgttctgtg
gctacagacaacaagtccttctttgtcctgtccatgtcagacaacggagcccagatttat
gagcttatggcaccgaccgtctcagatcaaagaacgtggcagcgcctaatcatccagaga
gcggacgccatgaaggtcaaaccccacagcgtcatacctttgcctcagactgagggggag
agggatggcgttgagctcatcacagcaggagtttcaaggctgagcagagactcggaccgc
acttccaccggcagcacccagtccacagataaagagagtagtctagcctctagaagtggg
ttgcagagttctccaccaggtaataatccatttgagggggtgaagatggagggagaggag
gaggaggaggaggaagaggaaggttttgtggacccagaaattccttaccaggtggctgaa
gatggtaaaggagactcgttcaacatgtttccctccagagcagacgaagcactgaaaaca
ttggcagcattgaaacaggttttggtgacccagctgatgtcccaggaggcttcggagcaa
accaaacgctccacagggggccgtctcctccggaccacctctctgaggaccccggttgac
agccgggcgcgggtgatggtccacaatggctccgaaaagaacagctcccagacagaggac
ctgaatctggacccgagctctggggacacaggcttctttgattctcctgaggattatgca
ggttatttagtcctggagggttatggcggtccaggagaaagcagcacagatgatgatgtc
atggcgtccaatccagggaagcagctacgcacctcacaaggctgtgctgctgactctggc
atcaatttgaggttttcctcaatgtcacagggaggcagcctctcgtccttaagcagacag
gtcttgtcttatcttaaaaatcttcagaccaacctcatatatttgaaggaggttgaagcc
aagtacaataatctaataaagcaaaggccagaaatgtcagcagcagacacagatggaaac
aaagataaaagatag
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integrated database retrieval system
